Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 NTS-203ENST00000551529 801 ntTSL 3 BASIC2.82□□□□□ -1.96
IRX4P78413 AC245505.1-201ENST00000556398 224 ntBASIC2.82□□□□□ -1.96
IRX4P78413 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC2.82□□□□□ -1.96
IRX4P78413 AC234778.2-201ENST00000566241 354 ntBASIC2.82□□□□□ -1.96
IRX4P78413 MIR3167-201ENST00000579623 85 ntBASIC2.82□□□□□ -1.96
IRX4P78413 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC2.82□□□□□ -1.96
IRX4P78413 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.82□□□□□ -1.96
IRX4P78413 AC012557.2-201ENST00000605919 418 ntBASIC2.82□□□□□ -1.96
IRX4P78413 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC2.82□□□□□ -1.96
IRX4P78413 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.82□□□□□ -1.96
IRX4P78413 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
IRX4P78413 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
IRX4P78413 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.81□□□□□ -1.96
IRX4P78413 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
IRX4P78413 Y_RNA.296-201ENST00000364930 108 ntBASIC2.81□□□□□ -1.96
IRX4P78413 RNU6-282P-201ENST00000365357 103 ntBASIC2.81□□□□□ -1.96
IRX4P78413 RNU6-259P-201ENST00000383999 107 ntBASIC2.81□□□□□ -1.96
IRX4P78413 RNU2-33P-201ENST00000410344 192 ntBASIC2.81□□□□□ -1.96
IRX4P78413 AL096701.2-201ENST00000416920 238 ntBASIC2.81□□□□□ -1.96
IRX4P78413 RPL7P37-201ENST00000425095 738 ntBASIC2.81□□□□□ -1.96
IRX4P78413 FCF1P1-201ENST00000432690 571 ntBASIC2.81□□□□□ -1.96
IRX4P78413 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC2.81□□□□□ -1.96
IRX4P78413 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.81□□□□□ -1.96
IRX4P78413 WASF1P1-201ENST00000447560 1131 ntBASIC2.81□□□□□ -1.96
IRX4P78413 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC2.81□□□□□ -1.96
IRX4P78413 C1DP4-201ENST00000455429 424 ntBASIC2.81□□□□□ -1.96
IRX4P78413 AC003982.1-202ENST00000469928 248 ntBASIC2.81□□□□□ -1.96
IRX4P78413 RPS20P22-201ENST00000473700 357 ntBASIC2.81□□□□□ -1.96
IRX4P78413 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC2.81□□□□□ -1.96
IRX4P78413 AC105252.1-201ENST00000503089 286 ntBASIC2.81□□□□□ -1.96
IRX4P78413 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC2.81□□□□□ -1.96
IRX4P78413 RNU7-51P-201ENST00000516560 62 ntBASIC2.81□□□□□ -1.96
IRX4P78413 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC2.81□□□□□ -1.96
IRX4P78413 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.81□□□□□ -1.96
IRX4P78413 AC087883.1-201ENST00000551882 391 ntBASIC2.81□□□□□ -1.96
IRX4P78413 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.81□□□□□ -1.96
IRX4P78413 DPPA3P3-201ENST00000603842 430 ntBASIC2.81□□□□□ -1.96
IRX4P78413 MTND4LP5-201ENST00000605152 292 ntBASIC2.81□□□□□ -1.96
IRX4P78413 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.81□□□□□ -1.96
IRX4P78413 AC138649.3-201ENST00000622154 254 ntBASIC2.81□□□□□ -1.96
IRX4P78413 MIR7843-201ENST00000622274 79 ntBASIC2.81□□□□□ -1.96
IRX4P78413 CR848007.1-201ENST00000442354 1699 ntBASIC2.81□□□□□ -1.96
IRX4P78413 MTND5P26-201ENST00000426018 1752 ntBASIC2.81□□□□□ -1.96
IRX4P78413 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
IRX4P78413 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.81□□□□□ -1.96
IRX4P78413 AP003122.5-201ENST00000527668 3766 ntBASIC2.8□□□□□ -1.96
IRX4P78413 HSPE1P11-201ENST00000339579 310 ntBASIC2.8□□□□□ -1.96
IRX4P78413 OR56A5-201ENST00000340110 738 ntBASIC2.8□□□□□ -1.96
IRX4P78413 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
IRX4P78413 Y_RNA.41-201ENST00000362646 102 ntBASIC2.8□□□□□ -1.96
IRX4P78413 RNU6-859P-201ENST00000362728 107 ntBASIC2.8□□□□□ -1.96
IRX4P78413 RNA5SP68-201ENST00000363885 119 ntBASIC2.8□□□□□ -1.96
IRX4P78413 RNA5SP139-201ENST00000364340 117 ntBASIC2.8□□□□□ -1.96
IRX4P78413 RNU1-112P-201ENST00000364401 164 ntBASIC2.8□□□□□ -1.96
IRX4P78413 RN7SKP226-201ENST00000364912 300 ntBASIC2.8□□□□□ -1.96
IRX4P78413 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.8□□□□□ -1.96
IRX4P78413 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
IRX4P78413 RNA5SP354-201ENST00000391247 136 ntBASIC2.8□□□□□ -1.96
IRX4P78413 NDUFS5P1-201ENST00000405668 289 ntBASIC2.8□□□□□ -1.96
IRX4P78413 PIGFP2-201ENST00000421400 651 ntBASIC2.8□□□□□ -1.96
IRX4P78413 ZNF863P-201ENST00000426746 417 ntBASIC2.8□□□□□ -1.96
IRX4P78413 AC093106.2-201ENST00000428212 385 ntBASIC2.8□□□□□ -1.96
IRX4P78413 AC104332.2-201ENST00000429959 156 ntBASIC2.8□□□□□ -1.96
IRX4P78413 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC2.8□□□□□ -1.96
IRX4P78413 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.8□□□□□ -1.96
IRX4P78413 MRPL50P4-201ENST00000446432 475 ntBASIC2.8□□□□□ -1.96
IRX4P78413 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
IRX4P78413 SNORD97-201ENST00000459187 142 ntBASIC2.8□□□□□ -1.96
IRX4P78413 Y_RNA.638-201ENST00000459374 113 ntBASIC2.8□□□□□ -1.96
IRX4P78413 RNU7-23P-201ENST00000459465 62 ntBASIC2.8□□□□□ -1.96
IRX4P78413 AC128713.1-201ENST00000471495 306 ntBASIC2.8□□□□□ -1.96
IRX4P78413 AC091133.4-201ENST00000511142 308 ntBASIC2.8□□□□□ -1.96
IRX4P78413 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.8□□□□□ -1.96
IRX4P78413 RNU2-10P-201ENST00000516375 211 ntBASIC2.8□□□□□ -1.96
IRX4P78413 HPRT1P3-201ENST00000539521 576 ntBASIC2.8□□□□□ -1.96
IRX4P78413 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.8□□□□□ -1.96
IRX4P78413 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.8□□□□□ -1.96
IRX4P78413 FTX_3.1-201ENST00000610451 147 ntBASIC2.8□□□□□ -1.96
IRX4P78413 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.8□□□□□ -1.96
IRX4P78413 AC136475.10-201ENST00000620253 385 ntBASIC2.8□□□□□ -1.96
IRX4P78413 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC2.8□□□□□ -1.96
IRX4P78413 OR5AK4P-201ENST00000635912 903 ntBASIC2.8□□□□□ -1.96
IRX4P78413 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
IRX4P78413 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.8□□□□□ -1.96
IRX4P78413 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.8□□□□□ -1.96
IRX4P78413 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.79□□□□□ -1.96
IRX4P78413 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
IRX4P78413 RNU6-169P-201ENST00000365336 107 ntBASIC2.79□□□□□ -1.96
IRX4P78413 AL512633.1-201ENST00000399931 655 ntBASIC2.79□□□□□ -1.96
IRX4P78413 AL139397.2-201ENST00000404529 772 ntBASIC2.79□□□□□ -1.96
IRX4P78413 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
IRX4P78413 RPL23AP30-201ENST00000432419 501 ntBASIC2.79□□□□□ -1.96
IRX4P78413 AL451074.3-201ENST00000437709 472 ntBASIC2.79□□□□□ -1.96
IRX4P78413 AC020550.1-201ENST00000447385 163 ntBASIC2.79□□□□□ -1.96
IRX4P78413 FDX1P2-201ENST00000450769 375 ntBASIC2.79□□□□□ -1.96
IRX4P78413 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC2.79□□□□□ -1.96
IRX4P78413 MTCYBP1-201ENST00000454315 1119 ntBASIC2.79□□□□□ -1.96
IRX4P78413 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC2.79□□□□□ -1.96
IRX4P78413 UBL5P3-201ENST00000475112 231 ntBASIC2.79□□□□□ -1.96
IRX4P78413 AC087190.1-201ENST00000484462 480 ntBASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 369 ms