Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 RNA5SP216-201ENST00000516111 123 ntBASIC2.23□□□□□ -2.05
CCNA1P78396 SNORA31.25-201ENST00000517242 134 ntBASIC2.23□□□□□ -2.05
CCNA1P78396 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.23□□□□□ -2.05
CCNA1P78396 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
CCNA1P78396 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC2.23□□□□□ -2.05
CCNA1P78396 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC2.23□□□□□ -2.05
CCNA1P78396 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.23□□□□□ -2.05
CCNA1P78396 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.23□□□□□ -2.05
CCNA1P78396 AC007490.1-201ENST00000624321 703 ntBASIC2.23□□□□□ -2.05
CCNA1P78396 UGP2-231ENST00000627474 264 ntTSL 5 BASIC2.23□□□□□ -2.05
CCNA1P78396 AC097655.1-201ENST00000635075 318 ntBASIC2.23□□□□□ -2.05
CCNA1P78396 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.23□□□□□ -2.05
CCNA1P78396 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
CCNA1P78396 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
CCNA1P78396 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
CCNA1P78396 RNU6-289P-201ENST00000364093 107 ntBASIC2.22□□□□□ -2.05
CCNA1P78396 RNU6-853P-201ENST00000364306 107 ntBASIC2.22□□□□□ -2.05
CCNA1P78396 Y_RNA.238-201ENST00000364441 102 ntBASIC2.22□□□□□ -2.05
CCNA1P78396 RNU6-621P-201ENST00000364752 109 ntBASIC2.22□□□□□ -2.05
CCNA1P78396 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.22□□□□□ -2.05
CCNA1P78396 RPL23AP36-201ENST00000413895 458 ntBASIC2.22□□□□□ -2.05
CCNA1P78396 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC2.22□□□□□ -2.05
CCNA1P78396 AL592045.1-201ENST00000429867 352 ntBASIC2.22□□□□□ -2.05
CCNA1P78396 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
CCNA1P78396 RPL21P134-201ENST00000453468 483 ntBASIC2.22□□□□□ -2.05
CCNA1P78396 FABP5P15-201ENST00000453566 214 ntBASIC2.22□□□□□ -2.05
CCNA1P78396 ZNF736P4Y-201ENST00000454995 1243 ntBASIC2.22□□□□□ -2.05
CCNA1P78396 RNU7-59P-201ENST00000459101 61 ntBASIC2.22□□□□□ -2.05
CCNA1P78396 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC2.22□□□□□ -2.05
CCNA1P78396 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.22□□□□□ -2.05
CCNA1P78396 AC108729.1-201ENST00000487812 947 ntBASIC2.22□□□□□ -2.05
CCNA1P78396 AC018437.1-201ENST00000492214 406 ntBASIC2.22□□□□□ -2.05
CCNA1P78396 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC2.22□□□□□ -2.05
CCNA1P78396 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC2.22□□□□□ -2.05
CCNA1P78396 AL133153.1-201ENST00000557756 303 ntBASIC2.22□□□□□ -2.05
CCNA1P78396 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC2.22□□□□□ -2.05
CCNA1P78396 ROCK1P1-201ENST00000573767 549 ntBASIC2.22□□□□□ -2.05
CCNA1P78396 TMF1P1-201ENST00000576058 373 ntBASIC2.22□□□□□ -2.05
CCNA1P78396 MIR5089-201ENST00000580047 84 ntBASIC2.22□□□□□ -2.05
CCNA1P78396 AP001004.1-201ENST00000582468 324 ntBASIC2.22□□□□□ -2.05
CCNA1P78396 MIR5002-201ENST00000584713 97 ntBASIC2.22□□□□□ -2.05
CCNA1P78396 AC006270.3-201ENST00000605967 1036 ntBASIC2.22□□□□□ -2.05
CCNA1P78396 AC010608.3-201ENST00000625048 527 ntBASIC2.22□□□□□ -2.05
CCNA1P78396 AL445984.1-201ENST00000637834 659 ntBASIC2.22□□□□□ -2.05
CCNA1P78396 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.22□□□□□ -2.05
CCNA1P78396 NACAP2-201ENST00000318548 624 ntBASIC2.21□□□□□ -2.06
CCNA1P78396 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
CCNA1P78396 SNORA16B-201ENST00000364674 135 ntBASIC2.21□□□□□ -2.06
CCNA1P78396 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.21□□□□□ -2.06
CCNA1P78396 Y_RNA.595-201ENST00000410403 105 ntBASIC2.21□□□□□ -2.06
CCNA1P78396 ISCA1P1-201ENST00000426679 387 ntBASIC2.21□□□□□ -2.06
CCNA1P78396 AC104651.1-201ENST00000427559 735 ntBASIC2.21□□□□□ -2.06
CCNA1P78396 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC2.21□□□□□ -2.06
CCNA1P78396 UBE2FP3-201ENST00000436366 524 ntBASIC2.21□□□□□ -2.06
CCNA1P78396 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC2.21□□□□□ -2.06
CCNA1P78396 EEF1E1P1-201ENST00000446998 430 ntBASIC2.21□□□□□ -2.06
CCNA1P78396 AL031313.1-201ENST00000448435 256 ntBASIC2.21□□□□□ -2.06
CCNA1P78396 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC2.21□□□□□ -2.06
CCNA1P78396 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC2.21□□□□□ -2.06
CCNA1P78396 AP001324.2-201ENST00000461163 319 ntBASIC2.21□□□□□ -2.06
CCNA1P78396 AC107032.1-201ENST00000485945 480 ntBASIC2.21□□□□□ -2.06
CCNA1P78396 AC079395.1-201ENST00000510981 262 ntBASIC2.21□□□□□ -2.06
CCNA1P78396 AC109445.1-201ENST00000512356 383 ntBASIC2.21□□□□□ -2.06
CCNA1P78396 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.21□□□□□ -2.06
CCNA1P78396 CBX3P7-201ENST00000532876 502 ntBASIC2.21□□□□□ -2.06
CCNA1P78396 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.21□□□□□ -2.06
CCNA1P78396 MIR4498-201ENST00000577599 66 ntBASIC2.21□□□□□ -2.06
CCNA1P78396 AL355297.2-201ENST00000604792 129 ntBASIC2.21□□□□□ -2.06
CCNA1P78396 AC245297.2-201ENST00000610119 565 ntBASIC2.21□□□□□ -2.06
CCNA1P78396 AC091834.1-201ENST00000614543 472 ntBASIC2.21□□□□□ -2.06
CCNA1P78396 AL109620.1-201ENST00000618738 1197 ntBASIC2.21□□□□□ -2.06
CCNA1P78396 AC109809.1-201ENST00000619665 545 ntBASIC2.21□□□□□ -2.06
CCNA1P78396 AL162373.1-201ENST00000620433 407 ntBASIC2.21□□□□□ -2.06
CCNA1P78396 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.21□□□□□ -2.06
CCNA1P78396 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
CCNA1P78396 KPNA2P1-201ENST00000458289 1591 ntBASIC2.2□□□□□ -2.06
CCNA1P78396 RNU6-777P-201ENST00000364265 104 ntBASIC2.2□□□□□ -2.06
CCNA1P78396 Y_RNA.465-201ENST00000384293 102 ntBASIC2.2□□□□□ -2.06
CCNA1P78396 RNU6-14P-201ENST00000384630 106 ntBASIC2.2□□□□□ -2.06
CCNA1P78396 SNORA46.1-201ENST00000391069 153 ntBASIC2.2□□□□□ -2.06
CCNA1P78396 MTCO1P17-201ENST00000411522 491 ntBASIC2.2□□□□□ -2.06
CCNA1P78396 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC2.2□□□□□ -2.06
CCNA1P78396 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC2.2□□□□□ -2.06
CCNA1P78396 AC009238.1-201ENST00000442165 424 ntBASIC2.2□□□□□ -2.06
CCNA1P78396 AC009237.6-201ENST00000446969 424 ntBASIC2.2□□□□□ -2.06
CCNA1P78396 AL031659.1-201ENST00000447075 539 ntBASIC2.2□□□□□ -2.06
CCNA1P78396 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC2.2□□□□□ -2.06
CCNA1P78396 RN7SKP210-201ENST00000459176 261 ntBASIC2.2□□□□□ -2.06
CCNA1P78396 AC079804.2-201ENST00000490376 200 ntBASIC2.2□□□□□ -2.06
CCNA1P78396 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC2.2□□□□□ -2.06
CCNA1P78396 AC116353.3-201ENST00000511215 249 ntBASIC2.2□□□□□ -2.06
CCNA1P78396 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.2□□□□□ -2.06
CCNA1P78396 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.2□□□□□ -2.06
CCNA1P78396 AC009712.1-201ENST00000564938 316 ntBASIC2.2□□□□□ -2.06
CCNA1P78396 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
CCNA1P78396 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC2.2□□□□□ -2.06
CCNA1P78396 MIR4509-3-201ENST00000578671 94 ntBASIC2.2□□□□□ -2.06
CCNA1P78396 MIR4287-201ENST00000579398 78 ntBASIC2.2□□□□□ -2.06
CCNA1P78396 AC022662.1-201ENST00000580252 331 ntBASIC2.2□□□□□ -2.06
CCNA1P78396 MIR4509-2-201ENST00000583920 94 ntBASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 115.2 ms