Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.33□□□□□ -2.2
SPCS3P61009 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
SPCS3P61009 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
SPCS3P61009 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC1.32□□□□□ -2.2
SPCS3P61009 MIR449A-201ENST00000362113 91 ntBASIC1.32□□□□□ -2.2
SPCS3P61009 RNU5E-1-201ENST00000362477 120 ntBASIC1.32□□□□□ -2.2
SPCS3P61009 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.32□□□□□ -2.2
SPCS3P61009 RNU6-468P-201ENST00000384003 109 ntBASIC1.32□□□□□ -2.2
SPCS3P61009 MIR583-201ENST00000384846 75 ntBASIC1.32□□□□□ -2.2
SPCS3P61009 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.32□□□□□ -2.2
SPCS3P61009 RNA5SP465-201ENST00000391195 109 ntBASIC1.32□□□□□ -2.2
SPCS3P61009 RNU6-1140P-201ENST00000410517 106 ntBASIC1.32□□□□□ -2.2
SPCS3P61009 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC1.32□□□□□ -2.2
SPCS3P61009 RPL18AP17-201ENST00000455326 198 ntBASIC1.32□□□□□ -2.2
SPCS3P61009 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.32□□□□□ -2.2
SPCS3P61009 AC139453.3-201ENST00000493276 369 ntBASIC1.32□□□□□ -2.2
SPCS3P61009 AC098862.1-201ENST00000504991 413 ntBASIC1.32□□□□□ -2.2
SPCS3P61009 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC1.32□□□□□ -2.2
SPCS3P61009 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC1.32□□□□□ -2.2
SPCS3P61009 RNU6-362P-201ENST00000516736 90 ntBASIC1.32□□□□□ -2.2
SPCS3P61009 RNU6-678P-201ENST00000516832 109 ntBASIC1.32□□□□□ -2.2
SPCS3P61009 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC1.32□□□□□ -2.2
SPCS3P61009 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC1.32□□□□□ -2.2
SPCS3P61009 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC1.32□□□□□ -2.2
SPCS3P61009 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC1.32□□□□□ -2.2
SPCS3P61009 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.32□□□□□ -2.2
SPCS3P61009 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.32□□□□□ -2.2
SPCS3P61009 MIR6134-201ENST00000617606 109 ntBASIC1.32□□□□□ -2.2
SPCS3P61009 AC093875.1-201ENST00000623688 504 ntBASIC1.32□□□□□ -2.2
SPCS3P61009 AP000648.3-201ENST00000623539 4507 ntBASIC1.32□□□□□ -2.2
SPCS3P61009 SLC10A5P1-201ENST00000379063 1306 ntBASIC1.32□□□□□ -2.2
SPCS3P61009 AL079343.1-201ENST00000572358 1771 ntBASIC1.31□□□□□ -2.2
SPCS3P61009 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
SPCS3P61009 RNU6-609P-201ENST00000365459 107 ntBASIC1.31□□□□□ -2.2
SPCS3P61009 Z98749.2-208ENST00000381646 500 ntBASIC1.31□□□□□ -2.2
SPCS3P61009 RNU6-338P-201ENST00000383888 105 ntBASIC1.31□□□□□ -2.2
SPCS3P61009 RNU1-57P-201ENST00000384491 166 ntBASIC1.31□□□□□ -2.2
SPCS3P61009 MIR30A-201ENST00000385092 71 ntBASIC1.31□□□□□ -2.2
SPCS3P61009 MIR29C-201ENST00000385231 88 ntBASIC1.31□□□□□ -2.2
SPCS3P61009 AC009310.1-201ENST00000414414 451 ntBASIC1.31□□□□□ -2.2
SPCS3P61009 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC1.31□□□□□ -2.2
SPCS3P61009 HMGN2P3-201ENST00000433603 273 ntBASIC1.31□□□□□ -2.2
SPCS3P61009 HMGN2P5-201ENST00000436882 273 ntBASIC1.31□□□□□ -2.2
SPCS3P61009 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC1.31□□□□□ -2.2
SPCS3P61009 ZNF736P11Y-201ENST00000442535 1213 ntBASIC1.31□□□□□ -2.2
SPCS3P61009 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC1.31□□□□□ -2.2
SPCS3P61009 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.31□□□□□ -2.2
SPCS3P61009 AC010631.1-201ENST00000474150 156 ntBASIC1.31□□□□□ -2.2
SPCS3P61009 ANXA2P1-201ENST00000505539 926 ntBASIC1.31□□□□□ -2.2
SPCS3P61009 AC116655.1-201ENST00000508324 901 ntBASIC1.31□□□□□ -2.2
SPCS3P61009 AC093809.1-201ENST00000509155 340 ntBASIC1.31□□□□□ -2.2
SPCS3P61009 AC117522.2-201ENST00000510049 657 ntBASIC1.31□□□□□ -2.2
SPCS3P61009 RN7SKP258-201ENST00000517151 304 ntBASIC1.31□□□□□ -2.2
SPCS3P61009 CYCSP27-201ENST00000527643 293 ntBASIC1.31□□□□□ -2.2
SPCS3P61009 MIR5708-201ENST00000579723 85 ntBASIC1.31□□□□□ -2.2
SPCS3P61009 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC1.31□□□□□ -2.2
SPCS3P61009 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
SPCS3P61009 AC021171.1-201ENST00000603137 706 ntBASIC1.31□□□□□ -2.2
SPCS3P61009 AC098483.2-201ENST00000603158 454 ntBASIC1.31□□□□□ -2.2
SPCS3P61009 AC021646.1-201ENST00000605469 484 ntBASIC1.31□□□□□ -2.2
SPCS3P61009 AC087045.1-201ENST00000605856 382 ntBASIC1.31□□□□□ -2.2
SPCS3P61009 RNU6-91P-201ENST00000607774 107 ntBASIC1.31□□□□□ -2.2
SPCS3P61009 AC034229.4-201ENST00000607861 441 ntBASIC1.31□□□□□ -2.2
SPCS3P61009 AC068944.2-201ENST00000610373 403 ntBASIC1.31□□□□□ -2.2
SPCS3P61009 AC099842.1-201ENST00000619919 596 ntBASIC1.31□□□□□ -2.2
SPCS3P61009 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC1.31□□□□□ -2.2
SPCS3P61009 AC084768.2-201ENST00000622736 221 ntBASIC1.31□□□□□ -2.2
SPCS3P61009 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
SPCS3P61009 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
SPCS3P61009 ZNF876P-202ENST00000398732 1485 ntBASIC1.31□□□□□ -2.2
SPCS3P61009 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
SPCS3P61009 ZNF29P-201ENST00000225587 168 ntBASIC1.3□□□□□ -2.2
SPCS3P61009 RNU6-512P-201ENST00000364438 103 ntBASIC1.3□□□□□ -2.2
SPCS3P61009 SNORA40.18-201ENST00000391200 128 ntBASIC1.3□□□□□ -2.2
SPCS3P61009 RSL24D1P4-201ENST00000400938 484 ntBASIC1.3□□□□□ -2.2
SPCS3P61009 RN7SKP101-201ENST00000411376 320 ntBASIC1.3□□□□□ -2.2
SPCS3P61009 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC1.3□□□□□ -2.2
SPCS3P61009 OR51A5P-201ENST00000415429 942 ntBASIC1.3□□□□□ -2.2
SPCS3P61009 RPL30P13-201ENST00000418873 348 ntBASIC1.3□□□□□ -2.2
SPCS3P61009 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.3□□□□□ -2.2
SPCS3P61009 UBE2V1P4-201ENST00000425374 344 ntBASIC1.3□□□□□ -2.2
SPCS3P61009 MTND5P14-201ENST00000441481 1267 ntBASIC1.3□□□□□ -2.2
SPCS3P61009 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC1.3□□□□□ -2.2
SPCS3P61009 FCF1P6-201ENST00000456841 595 ntBASIC1.3□□□□□ -2.2
SPCS3P61009 RNA5SP57-201ENST00000459463 123 ntBASIC1.3□□□□□ -2.2
SPCS3P61009 RPL37P6-201ENST00000460682 294 ntBASIC1.3□□□□□ -2.2
SPCS3P61009 HESX1-202ENST00000473921 757 ntTSL 5 BASIC1.3□□□□□ -2.2
SPCS3P61009 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC1.3□□□□□ -2.2
SPCS3P61009 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC1.3□□□□□ -2.2
SPCS3P61009 AC092436.1-201ENST00000506450 503 ntBASIC1.3□□□□□ -2.2
SPCS3P61009 RNU6-1225P-201ENST00000516336 65 ntBASIC1.3□□□□□ -2.2
SPCS3P61009 RNU6-667P-201ENST00000517186 102 ntBASIC1.3□□□□□ -2.2
SPCS3P61009 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.3□□□□□ -2.2
SPCS3P61009 AC023538.1-201ENST00000534576 736 ntBASIC1.3□□□□□ -2.2
SPCS3P61009 IMMP1LP2-201ENST00000552954 492 ntBASIC1.3□□□□□ -2.2
SPCS3P61009 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC1.3□□□□□ -2.2
SPCS3P61009 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.3□□□□□ -2.2
SPCS3P61009 DPPA3P3-201ENST00000603842 430 ntBASIC1.3□□□□□ -2.2
SPCS3P61009 AC103710.2-201ENST00000609912 942 ntBASIC1.3□□□□□ -2.2
SPCS3P61009 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 133 ms