Protein–RNA interactions for Protein: P60507

ERVFC1, Endogenous retrovirus group FC1 Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1P60507 PPP1R11P2-201ENST00000423543 382 ntBASIC4.34□□□□□ -1.71
ERVFC1P60507 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
ERVFC1P60507 LAMTOR3P1-201ENST00000428620 370 ntBASIC4.34□□□□□ -1.71
ERVFC1P60507 MYL8P-204ENST00000431574 518 ntBASIC4.34□□□□□ -1.71
ERVFC1P60507 RPEP5-201ENST00000441137 268 ntBASIC4.34□□□□□ -1.71
ERVFC1P60507 AL360271.2-201ENST00000447710 161 ntBASIC4.34□□□□□ -1.71
ERVFC1P60507 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC4.34□□□□□ -1.71
ERVFC1P60507 RPL7P49-201ENST00000471402 708 ntBASIC4.34□□□□□ -1.71
ERVFC1P60507 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
ERVFC1P60507 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.34□□□□□ -1.71
ERVFC1P60507 AC113155.1-201ENST00000511141 769 ntBASIC4.34□□□□□ -1.71
ERVFC1P60507 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC4.34□□□□□ -1.71
ERVFC1P60507 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC4.34□□□□□ -1.71
ERVFC1P60507 OR4H12P-201ENST00000556269 907 ntBASIC4.34□□□□□ -1.71
ERVFC1P60507 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC4.34□□□□□ -1.71
ERVFC1P60507 AL161756.2-201ENST00000604597 246 ntBASIC4.34□□□□□ -1.71
ERVFC1P60507 AL450472.3-201ENST00000615578 367 ntBASIC4.34□□□□□ -1.71
ERVFC1P60507 FP236240.3-201ENST00000623061 327 ntBASIC4.34□□□□□ -1.71
ERVFC1P60507 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.34□□□□□ -1.71
ERVFC1P60507 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
ERVFC1P60507 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.34□□□□□ -1.71
ERVFC1P60507 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.34□□□□□ -1.71
ERVFC1P60507 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
ERVFC1P60507 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC4.34□□□□□ -1.71
ERVFC1P60507 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.72
ERVFC1P60507 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.34□□□□□ -1.72
ERVFC1P60507 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
ERVFC1P60507 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
ERVFC1P60507 AC092435.4-201ENST00000623012 4159 ntBASIC4.33□□□□□ -1.72
ERVFC1P60507 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.33□□□□□ -1.72
ERVFC1P60507 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
ERVFC1P60507 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
ERVFC1P60507 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.33□□□□□ -1.72
ERVFC1P60507 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
ERVFC1P60507 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
ERVFC1P60507 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
ERVFC1P60507 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
ERVFC1P60507 Y_RNA.84-201ENST00000363011 104 ntBASIC4.33□□□□□ -1.72
ERVFC1P60507 Y_RNA.150-201ENST00000363562 102 ntBASIC4.33□□□□□ -1.72
ERVFC1P60507 SNORD27-201ENST00000363981 72 ntBASIC4.33□□□□□ -1.72
ERVFC1P60507 RNU6-280P-201ENST00000364145 104 ntBASIC4.33□□□□□ -1.72
ERVFC1P60507 Y_RNA.270-201ENST00000364693 104 ntBASIC4.33□□□□□ -1.72
ERVFC1P60507 Y_RNA.352-201ENST00000365439 102 ntBASIC4.33□□□□□ -1.72
ERVFC1P60507 MIR7-3-201ENST00000384898 110 ntBASIC4.33□□□□□ -1.72
ERVFC1P60507 LAP3P1-201ENST00000403648 294 ntBASIC4.33□□□□□ -1.72
ERVFC1P60507 U3.42-201ENST00000408746 214 ntBASIC4.33□□□□□ -1.72
ERVFC1P60507 RN7SKP156-201ENST00000410308 342 ntBASIC4.33□□□□□ -1.72
ERVFC1P60507 RNU6-325P-201ENST00000411132 105 ntBASIC4.33□□□□□ -1.72
ERVFC1P60507 BX842559.1-201ENST00000419615 532 ntBASIC4.33□□□□□ -1.72
ERVFC1P60507 AL391219.1-201ENST00000422570 483 ntBASIC4.33□□□□□ -1.72
ERVFC1P60507 AC004866.2-201ENST00000438285 481 ntBASIC4.33□□□□□ -1.72
ERVFC1P60507 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC4.33□□□□□ -1.72
ERVFC1P60507 RPS11P1-201ENST00000451072 473 ntBASIC4.33□□□□□ -1.72
ERVFC1P60507 RNU7-169P-201ENST00000459456 61 ntBASIC4.33□□□□□ -1.72
ERVFC1P60507 MTND3P25-201ENST00000509243 135 ntBASIC4.33□□□□□ -1.72
ERVFC1P60507 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.33□□□□□ -1.72
ERVFC1P60507 RNU4-71P-201ENST00000516258 113 ntBASIC4.33□□□□□ -1.72
ERVFC1P60507 RNU6-1212P-201ENST00000517023 104 ntBASIC4.33□□□□□ -1.72
ERVFC1P60507 AC126177.3-201ENST00000551839 688 ntBASIC4.33□□□□□ -1.72
ERVFC1P60507 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.33□□□□□ -1.72
ERVFC1P60507 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.33□□□□□ -1.72
ERVFC1P60507 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC4.33□□□□□ -1.72
ERVFC1P60507 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
ERVFC1P60507 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.33□□□□□ -1.72
ERVFC1P60507 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
ERVFC1P60507 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.33□□□□□ -1.72
ERVFC1P60507 AC068254.2-201ENST00000623938 3577 ntBASIC4.33□□□□□ -1.72
ERVFC1P60507 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.33□□□□□ -1.72
ERVFC1P60507 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
ERVFC1P60507 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
ERVFC1P60507 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC4.32□□□□□ -1.72
ERVFC1P60507 AC007390.2-201ENST00000606229 3803 ntBASIC4.32□□□□□ -1.72
ERVFC1P60507 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
ERVFC1P60507 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
ERVFC1P60507 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.32□□□□□ -1.72
ERVFC1P60507 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.32□□□□□ -1.72
ERVFC1P60507 RNU1-76P-201ENST00000362903 159 ntBASIC4.32□□□□□ -1.72
ERVFC1P60507 RNU6-1155P-201ENST00000363554 107 ntBASIC4.32□□□□□ -1.72
ERVFC1P60507 RNU6-288P-201ENST00000363690 104 ntBASIC4.32□□□□□ -1.72
ERVFC1P60507 U8.8-201ENST00000365399 135 ntBASIC4.32□□□□□ -1.72
ERVFC1P60507 Y_RNA.534-201ENST00000384599 112 ntBASIC4.32□□□□□ -1.72
ERVFC1P60507 MIR708-201ENST00000390708 88 ntBASIC4.32□□□□□ -1.72
ERVFC1P60507 RNU6-130P-201ENST00000411112 103 ntBASIC4.32□□□□□ -1.72
ERVFC1P60507 AP000275.1-201ENST00000411943 390 ntBASIC4.32□□□□□ -1.72
ERVFC1P60507 CYCSP33-201ENST00000414485 327 ntBASIC4.32□□□□□ -1.72
ERVFC1P60507 RPL21P38-201ENST00000418090 167 ntBASIC4.32□□□□□ -1.72
ERVFC1P60507 AL353621.1-201ENST00000418219 243 ntBASIC4.32□□□□□ -1.72
ERVFC1P60507 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.32□□□□□ -1.72
ERVFC1P60507 AC091286.1-201ENST00000431233 461 ntBASIC4.32□□□□□ -1.72
ERVFC1P60507 AL358472.1-201ENST00000431295 329 ntBASIC4.32□□□□□ -1.72
ERVFC1P60507 RPL23AP83-201ENST00000434984 473 ntBASIC4.32□□□□□ -1.72
ERVFC1P60507 ABCF2P2-201ENST00000450549 296 ntBASIC4.32□□□□□ -1.72
ERVFC1P60507 AL138752.1-201ENST00000452964 351 ntBASIC4.32□□□□□ -1.72
ERVFC1P60507 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
ERVFC1P60507 RN7SL323P-201ENST00000494712 295 ntBASIC4.32□□□□□ -1.72
ERVFC1P60507 RPS23P5-201ENST00000495419 428 ntBASIC4.32□□□□□ -1.72
ERVFC1P60507 AC006499.6-201ENST00000511169 607 ntBASIC4.32□□□□□ -1.72
ERVFC1P60507 HIGD1AP3-201ENST00000515857 278 ntBASIC4.32□□□□□ -1.72
ERVFC1P60507 RNU6-1095P-201ENST00000516148 108 ntBASIC4.32□□□□□ -1.72
ERVFC1P60507 SNRPGP16-201ENST00000533275 226 ntBASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 131.1 ms