Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 MIR888-201ENST00000401186 77 ntBASIC3.12□□□□□ -1.91
CLDN2P57739 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.12□□□□□ -1.91
CLDN2P57739 AL592114.1-201ENST00000403842 483 ntBASIC3.12□□□□□ -1.91
CLDN2P57739 RNU6-373P-201ENST00000411247 98 ntBASIC3.12□□□□□ -1.91
CLDN2P57739 OR9R1P-201ENST00000412200 877 ntBASIC3.12□□□□□ -1.91
CLDN2P57739 EEF1A1P40-201ENST00000412883 573 ntBASIC3.12□□□□□ -1.91
CLDN2P57739 COTL1P1-201ENST00000422309 375 ntBASIC3.12□□□□□ -1.91
CLDN2P57739 RPL35AP12-201ENST00000425362 338 ntBASIC3.12□□□□□ -1.91
CLDN2P57739 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.12□□□□□ -1.91
CLDN2P57739 MTCO3P18-201ENST00000440206 761 ntBASIC3.12□□□□□ -1.91
CLDN2P57739 NFU1P2-201ENST00000448700 469 ntBASIC3.12□□□□□ -1.91
CLDN2P57739 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC3.12□□□□□ -1.91
CLDN2P57739 RPL21P41-201ENST00000459863 264 ntBASIC3.12□□□□□ -1.91
CLDN2P57739 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.12□□□□□ -1.91
CLDN2P57739 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.12□□□□□ -1.91
CLDN2P57739 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.12□□□□□ -1.91
CLDN2P57739 AC104136.1-201ENST00000512969 394 ntBASIC3.12□□□□□ -1.91
CLDN2P57739 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC3.12□□□□□ -1.91
CLDN2P57739 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.12□□□□□ -1.91
CLDN2P57739 AL133241.1-201ENST00000556832 487 ntBASIC3.12□□□□□ -1.91
CLDN2P57739 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.12□□□□□ -1.91
CLDN2P57739 LARP7P3-201ENST00000579888 337 ntBASIC3.12□□□□□ -1.91
CLDN2P57739 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.12□□□□□ -1.91
CLDN2P57739 MIR548AC-201ENST00000585049 88 ntBASIC3.12□□□□□ -1.91
CLDN2P57739 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.12□□□□□ -1.91
CLDN2P57739 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.12□□□□□ -1.91
CLDN2P57739 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CLDN2P57739 AL020991.1-201ENST00000612314 373 ntBASIC3.12□□□□□ -1.91
CLDN2P57739 U7.8-201ENST00000619968 63 ntBASIC3.12□□□□□ -1.91
CLDN2P57739 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.12□□□□□ -1.91
CLDN2P57739 HSPA8P4-201ENST00000511877 1920 ntBASIC3.12□□□□□ -1.91
CLDN2P57739 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
CLDN2P57739 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CLDN2P57739 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.12□□□□□ -1.91
CLDN2P57739 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CLDN2P57739 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
CLDN2P57739 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.12□□□□□ -1.91
CLDN2P57739 OR4G1P-203ENST00000641984 1631 ntBASIC3.11□□□□□ -1.91
CLDN2P57739 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.11□□□□□ -1.91
CLDN2P57739 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CLDN2P57739 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.11□□□□□ -1.91
CLDN2P57739 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
CLDN2P57739 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.11□□□□□ -1.91
CLDN2P57739 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
CLDN2P57739 RNU6-1127P-201ENST00000384580 107 ntBASIC3.11□□□□□ -1.91
CLDN2P57739 SNORA44-201ENST00000384584 132 ntBASIC3.11□□□□□ -1.91
CLDN2P57739 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
CLDN2P57739 AL139039.1-201ENST00000401900 692 ntBASIC3.11□□□□□ -1.91
CLDN2P57739 RNU6-1077P-201ENST00000410506 102 ntBASIC3.11□□□□□ -1.91
CLDN2P57739 RNA5SP38-201ENST00000410750 119 ntBASIC3.11□□□□□ -1.91
CLDN2P57739 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC3.11□□□□□ -1.91
CLDN2P57739 ARL5AP1-201ENST00000418991 388 ntBASIC3.11□□□□□ -1.91
CLDN2P57739 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.11□□□□□ -1.91
CLDN2P57739 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.11□□□□□ -1.91
CLDN2P57739 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.11□□□□□ -1.91
CLDN2P57739 AC010401.1-201ENST00000463867 348 ntBASIC3.11□□□□□ -1.91
CLDN2P57739 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC3.11□□□□□ -1.91
CLDN2P57739 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.11□□□□□ -1.91
CLDN2P57739 SNORA31.1-201ENST00000515993 133 ntBASIC3.11□□□□□ -1.91
CLDN2P57739 SNORA31.5-201ENST00000516190 133 ntBASIC3.11□□□□□ -1.91
CLDN2P57739 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC3.11□□□□□ -1.91
CLDN2P57739 AP000889.1-201ENST00000530968 660 ntBASIC3.11□□□□□ -1.91
CLDN2P57739 AP002404.1-201ENST00000532005 451 ntBASIC3.11□□□□□ -1.91
CLDN2P57739 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
CLDN2P57739 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.11□□□□□ -1.91
CLDN2P57739 AC234778.2-201ENST00000566241 354 ntBASIC3.11□□□□□ -1.91
CLDN2P57739 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC3.11□□□□□ -1.91
CLDN2P57739 AC073308.1-201ENST00000623696 305 ntBASIC3.11□□□□□ -1.91
CLDN2P57739 AC091903.1-201ENST00000624322 454 ntBASIC3.11□□□□□ -1.91
CLDN2P57739 SCARNA15.3-201ENST00000626315 122 ntBASIC3.11□□□□□ -1.91
CLDN2P57739 SCARNA4.1-201ENST00000628597 123 ntBASIC3.11□□□□□ -1.91
CLDN2P57739 MIR3662-201ENST00000637030 95 ntBASIC3.11□□□□□ -1.91
CLDN2P57739 AC024614.3-201ENST00000637860 256 ntBASIC3.11□□□□□ -1.91
CLDN2P57739 PWAR6-201ENST00000552334 4618 ntBASIC3.11□□□□□ -1.91
CLDN2P57739 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
CLDN2P57739 RNU6-371P-201ENST00000364283 108 ntBASIC3.1□□□□□ -1.91
CLDN2P57739 RNU6-1283P-201ENST00000365314 105 ntBASIC3.1□□□□□ -1.91
CLDN2P57739 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.1□□□□□ -1.91
CLDN2P57739 SNORA54-201ENST00000384281 123 ntBASIC3.1□□□□□ -1.91
CLDN2P57739 MIR514A2-201ENST00000385131 88 ntBASIC3.1□□□□□ -1.91
CLDN2P57739 MIR514A3-201ENST00000385132 88 ntBASIC3.1□□□□□ -1.91
CLDN2P57739 SNORD67-201ENST00000390833 111 ntBASIC3.1□□□□□ -1.91
CLDN2P57739 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.1□□□□□ -1.91
CLDN2P57739 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.1□□□□□ -1.91
CLDN2P57739 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC3.1□□□□□ -1.91
CLDN2P57739 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC3.1□□□□□ -1.91
CLDN2P57739 SCARNA18-201ENST00000459004 134 ntBASIC3.1□□□□□ -1.91
CLDN2P57739 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC3.1□□□□□ -1.91
CLDN2P57739 PRDX4P1-201ENST00000507189 574 ntBASIC3.1□□□□□ -1.91
CLDN2P57739 RNU6-928P-201ENST00000516876 104 ntBASIC3.1□□□□□ -1.91
CLDN2P57739 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.1□□□□□ -1.91
CLDN2P57739 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.1□□□□□ -1.91
CLDN2P57739 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.1□□□□□ -1.91
CLDN2P57739 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.1□□□□□ -1.91
CLDN2P57739 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC3.1□□□□□ -1.91
CLDN2P57739 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.1□□□□□ -1.91
CLDN2P57739 MIR3941-201ENST00000582572 103 ntBASIC3.1□□□□□ -1.91
CLDN2P57739 AL355598.1-201ENST00000604169 202 ntBASIC3.1□□□□□ -1.91
CLDN2P57739 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.1□□□□□ -1.91
CLDN2P57739 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 126.8 ms