Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 AC010099.1-201ENST00000455434 375 ntBASIC3.28□□□□□ -1.88
HDAC4P56524 AL590639.1-201ENST00000456484 337 ntBASIC3.28□□□□□ -1.88
HDAC4P56524 RN7SL863P-201ENST00000462370 296 ntBASIC3.28□□□□□ -1.88
HDAC4P56524 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.28□□□□□ -1.88
HDAC4P56524 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC3.28□□□□□ -1.88
HDAC4P56524 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.28□□□□□ -1.88
HDAC4P56524 RBBP4P6-201ENST00000508098 202 ntBASIC3.28□□□□□ -1.88
HDAC4P56524 AC098591.2-201ENST00000510152 315 ntBASIC3.28□□□□□ -1.88
HDAC4P56524 AC108078.2-201ENST00000510750 236 ntBASIC3.28□□□□□ -1.88
HDAC4P56524 RNU6-1281P-201ENST00000516223 105 ntBASIC3.28□□□□□ -1.88
HDAC4P56524 RN7SKP219-201ENST00000516825 296 ntBASIC3.28□□□□□ -1.88
HDAC4P56524 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
HDAC4P56524 OR5AL2P-201ENST00000532185 920 ntBASIC3.28□□□□□ -1.88
HDAC4P56524 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.28□□□□□ -1.88
HDAC4P56524 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.28□□□□□ -1.88
HDAC4P56524 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.28□□□□□ -1.88
HDAC4P56524 SNORA59B-202ENST00000578183 701 ntBASIC3.28□□□□□ -1.88
HDAC4P56524 AC006504.3-201ENST00000586818 523 ntBASIC3.28□□□□□ -1.88
HDAC4P56524 AC174048.1-201ENST00000603389 144 ntBASIC3.28□□□□□ -1.88
HDAC4P56524 AP000907.4-201ENST00000604143 237 ntBASIC3.28□□□□□ -1.88
HDAC4P56524 AC107294.1-201ENST00000609524 467 ntBASIC3.28□□□□□ -1.88
HDAC4P56524 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
HDAC4P56524 MIR8057-201ENST00000620957 69 ntBASIC3.28□□□□□ -1.88
HDAC4P56524 AC025034.2-201ENST00000623264 286 ntBASIC3.28□□□□□ -1.88
HDAC4P56524 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC3.28□□□□□ -1.88
HDAC4P56524 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
HDAC4P56524 AL049641.1-201ENST00000441055 1948 ntBASIC3.28□□□□□ -1.88
HDAC4P56524 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
HDAC4P56524 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.28□□□□□ -1.88
HDAC4P56524 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
HDAC4P56524 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
HDAC4P56524 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
HDAC4P56524 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.27□□□□□ -1.89
HDAC4P56524 AL139276.1-201ENST00000311910 1001 ntBASIC3.27□□□□□ -1.89
HDAC4P56524 RNU6-1029P-201ENST00000384109 107 ntBASIC3.27□□□□□ -1.89
HDAC4P56524 Y_RNA.453-201ENST00000384223 109 ntBASIC3.27□□□□□ -1.89
HDAC4P56524 Y_RNA.481-201ENST00000384373 102 ntBASIC3.27□□□□□ -1.89
HDAC4P56524 Y_RNA.576-201ENST00000384781 102 ntBASIC3.27□□□□□ -1.89
HDAC4P56524 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
HDAC4P56524 RPL21P3-201ENST00000395517 478 ntBASIC3.27□□□□□ -1.89
HDAC4P56524 RNU4-47P-201ENST00000410876 114 ntBASIC3.27□□□□□ -1.89
HDAC4P56524 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
HDAC4P56524 USP9YP6-201ENST00000413550 854 ntBASIC3.27□□□□□ -1.89
HDAC4P56524 USP9YP27-201ENST00000418455 438 ntBASIC3.27□□□□□ -1.89
HDAC4P56524 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.27□□□□□ -1.89
HDAC4P56524 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.27□□□□□ -1.89
HDAC4P56524 MTCYBP8-201ENST00000422855 651 ntBASIC3.27□□□□□ -1.89
HDAC4P56524 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.27□□□□□ -1.89
HDAC4P56524 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.27□□□□□ -1.89
HDAC4P56524 AC073415.1-201ENST00000449240 153 ntBASIC3.27□□□□□ -1.89
HDAC4P56524 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC3.27□□□□□ -1.89
HDAC4P56524 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC3.27□□□□□ -1.89
HDAC4P56524 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.27□□□□□ -1.89
HDAC4P56524 AC146507.2-201ENST00000460608 476 ntBASIC3.27□□□□□ -1.89
HDAC4P56524 MTAPP1-201ENST00000489154 819 ntBASIC3.27□□□□□ -1.89
HDAC4P56524 AL160314.1-201ENST00000490836 438 ntBASIC3.27□□□□□ -1.89
HDAC4P56524 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC3.27□□□□□ -1.89
HDAC4P56524 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.27□□□□□ -1.89
HDAC4P56524 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC3.27□□□□□ -1.89
HDAC4P56524 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC3.27□□□□□ -1.89
HDAC4P56524 RNA5SP471-201ENST00000516971 106 ntBASIC3.27□□□□□ -1.89
HDAC4P56524 MTND1P35-201ENST00000526739 508 ntBASIC3.27□□□□□ -1.89
HDAC4P56524 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC3.27□□□□□ -1.89
HDAC4P56524 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
HDAC4P56524 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
HDAC4P56524 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC3.27□□□□□ -1.89
HDAC4P56524 AL133241.1-201ENST00000556832 487 ntBASIC3.27□□□□□ -1.89
HDAC4P56524 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC3.27□□□□□ -1.89
HDAC4P56524 AC008521.1-201ENST00000587471 187 ntBASIC3.27□□□□□ -1.89
HDAC4P56524 AC104458.1-201ENST00000608243 463 ntBASIC3.27□□□□□ -1.89
HDAC4P56524 AL591516.1-201ENST00000611326 274 ntBASIC3.27□□□□□ -1.89
HDAC4P56524 AL354950.2-201ENST00000617939 290 ntBASIC3.27□□□□□ -1.89
HDAC4P56524 AC010338.1-201ENST00000621823 717 ntBASIC3.27□□□□□ -1.89
HDAC4P56524 AC073308.1-201ENST00000623696 305 ntBASIC3.27□□□□□ -1.89
HDAC4P56524 AC018692.3-201ENST00000623929 123 ntBASIC3.27□□□□□ -1.89
HDAC4P56524 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.27□□□□□ -1.89
HDAC4P56524 MTND1P37-201ENST00000636562 264 ntBASIC3.27□□□□□ -1.89
HDAC4P56524 MTND5P42-201ENST00000637720 498 ntBASIC3.27□□□□□ -1.89
HDAC4P56524 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
HDAC4P56524 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.27□□□□□ -1.89
HDAC4P56524 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.26□□□□□ -1.89
HDAC4P56524 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.26□□□□□ -1.89
HDAC4P56524 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
HDAC4P56524 MAPK10-322ENST00000641485 4530 ntBASIC3.26□□□□□ -1.89
HDAC4P56524 RNU6-451P-201ENST00000362921 107 ntBASIC3.26□□□□□ -1.89
HDAC4P56524 RNU6-1167P-201ENST00000363227 94 ntBASIC3.26□□□□□ -1.89
HDAC4P56524 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.26□□□□□ -1.89
HDAC4P56524 CD24P4-201ENST00000382840 243 ntBASIC3.26□□□□□ -1.89
HDAC4P56524 Y_RNA.390-201ENST00000383932 102 ntBASIC3.26□□□□□ -1.89
HDAC4P56524 Y_RNA.510-201ENST00000384511 114 ntBASIC3.26□□□□□ -1.89
HDAC4P56524 MIR1289-1-201ENST00000408836 144 ntBASIC3.26□□□□□ -1.89
HDAC4P56524 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC3.26□□□□□ -1.89
HDAC4P56524 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.26□□□□□ -1.89
HDAC4P56524 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.26□□□□□ -1.89
HDAC4P56524 RPS24P13-201ENST00000442520 397 ntBASIC3.26□□□□□ -1.89
HDAC4P56524 NFU1P2-201ENST00000448700 469 ntBASIC3.26□□□□□ -1.89
HDAC4P56524 FABP5P13-201ENST00000452144 328 ntBASIC3.26□□□□□ -1.89
HDAC4P56524 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.26□□□□□ -1.89
HDAC4P56524 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC3.26□□□□□ -1.89
HDAC4P56524 RNU7-182P-201ENST00000459009 62 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms