Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 Y_RNA.61-201ENST00000362835 102 ntBASIC3.1□□□□□ -1.91
CDH12P55289 RNU6-1252P-201ENST00000363054 104 ntBASIC3.1□□□□□ -1.91
CDH12P55289 Y_RNA.356-201ENST00000365475 113 ntBASIC3.1□□□□□ -1.91
CDH12P55289 MIR301A-201ENST00000385261 86 ntBASIC3.1□□□□□ -1.91
CDH12P55289 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
CDH12P55289 RNA5SP44-201ENST00000410446 133 ntBASIC3.1□□□□□ -1.91
CDH12P55289 RAB9AP3-201ENST00000412737 573 ntBASIC3.1□□□□□ -1.91
CDH12P55289 SYF2P2-201ENST00000417620 583 ntBASIC3.1□□□□□ -1.91
CDH12P55289 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.1□□□□□ -1.91
CDH12P55289 AC092047.1-201ENST00000424997 240 ntBASIC3.1□□□□□ -1.91
CDH12P55289 AC073063.1-201ENST00000434352 607 ntBASIC3.1□□□□□ -1.91
CDH12P55289 RPL23AP22-201ENST00000437556 453 ntBASIC3.1□□□□□ -1.91
CDH12P55289 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.1□□□□□ -1.91
CDH12P55289 RAB9AP1-201ENST00000449393 573 ntBASIC3.1□□□□□ -1.91
CDH12P55289 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC3.1□□□□□ -1.91
CDH12P55289 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC3.1□□□□□ -1.91
CDH12P55289 RPS27P29-201ENST00000463110 252 ntBASIC3.1□□□□□ -1.91
CDH12P55289 AP002884.2-201ENST00000471647 395 ntBASIC3.1□□□□□ -1.91
CDH12P55289 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC3.1□□□□□ -1.91
CDH12P55289 AP002812.1-201ENST00000495378 474 ntBASIC3.1□□□□□ -1.91
CDH12P55289 MTND3P25-201ENST00000509243 135 ntBASIC3.1□□□□□ -1.91
CDH12P55289 MTND3P22-201ENST00000510932 243 ntBASIC3.1□□□□□ -1.91
CDH12P55289 PHBP14-201ENST00000512887 367 ntBASIC3.1□□□□□ -1.91
CDH12P55289 RNA5SP291-201ENST00000517222 105 ntBASIC3.1□□□□□ -1.91
CDH12P55289 IL7-206ENST00000520269 456 ntTSL 3 BASIC3.1□□□□□ -1.91
CDH12P55289 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.1□□□□□ -1.91
CDH12P55289 IGHV3-76-201ENST00000522465 295 ntBASIC3.1□□□□□ -1.91
CDH12P55289 AP000763.2-201ENST00000540641 163 ntBASIC3.1□□□□□ -1.91
CDH12P55289 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.1□□□□□ -1.91
CDH12P55289 AC099778.2-201ENST00000610904 211 ntBASIC3.1□□□□□ -1.91
CDH12P55289 AL121757.2-201ENST00000611223 313 ntBASIC3.1□□□□□ -1.91
CDH12P55289 AC009233.1-201ENST00000616477 371 ntBASIC3.1□□□□□ -1.91
CDH12P55289 AL359697.1-201ENST00000624879 587 ntBASIC3.1□□□□□ -1.91
CDH12P55289 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC3.1□□□□□ -1.91
CDH12P55289 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC3.1□□□□□ -1.91
CDH12P55289 AC009093.8-201ENST00000641769 292 ntBASIC3.1□□□□□ -1.91
CDH12P55289 SRP72P2-201ENST00000344851 1979 ntBASIC3.1□□□□□ -1.91
CDH12P55289 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC3.1□□□□□ -1.91
CDH12P55289 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CDH12P55289 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC3.1□□□□□ -1.91
CDH12P55289 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
CDH12P55289 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
CDH12P55289 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.09□□□□□ -1.91
CDH12P55289 ATP8A2P2-201ENST00000437678 1568 ntBASIC3.09□□□□□ -1.91
CDH12P55289 RNU6-254P-201ENST00000363377 107 ntBASIC3.09□□□□□ -1.91
CDH12P55289 Y_RNA.301-201ENST00000364990 103 ntBASIC3.09□□□□□ -1.91
CDH12P55289 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CDH12P55289 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CDH12P55289 EIF4E2P1-201ENST00000393781 255 ntBASIC3.09□□□□□ -1.91
CDH12P55289 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.09□□□□□ -1.91
CDH12P55289 RPLP0P7-201ENST00000416050 667 ntBASIC3.09□□□□□ -1.91
CDH12P55289 AL158156.1-201ENST00000422509 473 ntBASIC3.09□□□□□ -1.91
CDH12P55289 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.09□□□□□ -1.91
CDH12P55289 AL365400.1-201ENST00000431854 640 ntBASIC3.09□□□□□ -1.91
CDH12P55289 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC3.09□□□□□ -1.91
CDH12P55289 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.09□□□□□ -1.91
CDH12P55289 NDUFA5P4-201ENST00000436704 385 ntBASIC3.09□□□□□ -1.91
CDH12P55289 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.09□□□□□ -1.91
CDH12P55289 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.09□□□□□ -1.91
CDH12P55289 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.09□□□□□ -1.91
CDH12P55289 AMD1P1-201ENST00000457220 922 ntBASIC3.09□□□□□ -1.91
CDH12P55289 RPS23P3-201ENST00000470993 430 ntBASIC3.09□□□□□ -1.91
CDH12P55289 AC117503.1-201ENST00000472241 394 ntBASIC3.09□□□□□ -1.91
CDH12P55289 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
CDH12P55289 RPL7P43-201ENST00000478876 753 ntBASIC3.09□□□□□ -1.91
CDH12P55289 AC025518.1-201ENST00000479856 347 ntBASIC3.09□□□□□ -1.91
CDH12P55289 AC106707.2-201ENST00000484182 374 ntBASIC3.09□□□□□ -1.91
CDH12P55289 AC139453.3-201ENST00000493276 369 ntBASIC3.09□□□□□ -1.91
CDH12P55289 SNORA14.1-201ENST00000516113 141 ntBASIC3.09□□□□□ -1.91
CDH12P55289 RNU6-864P-201ENST00000516256 108 ntBASIC3.09□□□□□ -1.91
CDH12P55289 RNA5SP165-201ENST00000517142 115 ntBASIC3.09□□□□□ -1.91
CDH12P55289 AC009902.1-201ENST00000519351 183 ntBASIC3.09□□□□□ -1.91
CDH12P55289 AC105029.1-201ENST00000520250 669 ntBASIC3.09□□□□□ -1.91
CDH12P55289 AC068657.1-201ENST00000520807 306 ntBASIC3.09□□□□□ -1.91
CDH12P55289 AC037471.2-201ENST00000564941 598 ntBASIC3.09□□□□□ -1.91
CDH12P55289 MIR5692A1-201ENST00000580523 69 ntBASIC3.09□□□□□ -1.91
CDH12P55289 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.09□□□□□ -1.91
CDH12P55289 AC005498.1-201ENST00000592125 465 ntBASIC3.09□□□□□ -1.91
CDH12P55289 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CDH12P55289 uc_338.5-201ENST00000611839 155 ntBASIC3.09□□□□□ -1.91
CDH12P55289 AC073476.4-201ENST00000628409 72 ntBASIC3.09□□□□□ -1.91
CDH12P55289 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.09□□□□□ -1.91
CDH12P55289 TPTEP1-208ENST00000636884 213 ntBASIC3.09□□□□□ -1.91
CDH12P55289 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.09□□□□□ -1.91
CDH12P55289 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
CDH12P55289 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
CDH12P55289 AL049641.1-201ENST00000441055 1948 ntBASIC3.09□□□□□ -1.92
CDH12P55289 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
CDH12P55289 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
CDH12P55289 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CDH12P55289 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
CDH12P55289 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.08□□□□□ -1.92
CDH12P55289 Y_RNA.33-201ENST00000362591 102 ntBASIC3.08□□□□□ -1.92
CDH12P55289 SNORD3E-201ENST00000362899 217 ntBASIC3.08□□□□□ -1.92
CDH12P55289 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.08□□□□□ -1.92
CDH12P55289 MT-TD-201ENST00000387419 68 ntBASIC3.08□□□□□ -1.92
CDH12P55289 SNORD17-201ENST00000390930 237 ntBASIC3.08□□□□□ -1.92
CDH12P55289 RNU6ATAC-201ENST00000408749 126 ntBASIC3.08□□□□□ -1.92
CDH12P55289 RN7SKP111-201ENST00000410349 271 ntBASIC3.08□□□□□ -1.92
CDH12P55289 RN7SKP202-201ENST00000410439 330 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms