Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 Z82195.2-201ENST00000612348 18351 ntBASIC2.6□□□□□ -1.99
HMGCS2P54868 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
HMGCS2P54868 AC007336.1-201ENST00000576365 3828 ntBASIC2.6□□□□□ -1.99
HMGCS2P54868 SDAD1P2-201ENST00000441308 2028 ntBASIC2.59□□□□□ -1.99
HMGCS2P54868 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.59□□□□□ -1.99
HMGCS2P54868 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.59□□□□□ -1.99
HMGCS2P54868 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
HMGCS2P54868 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
HMGCS2P54868 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
HMGCS2P54868 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
HMGCS2P54868 SNORD56.5-201ENST00000364281 72 ntBASIC2.59□□□□□ -1.99
HMGCS2P54868 U8.9-201ENST00000365667 134 ntBASIC2.59□□□□□ -1.99
HMGCS2P54868 RNU6-198P-201ENST00000384258 104 ntBASIC2.59□□□□□ -1.99
HMGCS2P54868 RPL23AP32-201ENST00000395315 459 ntBASIC2.59□□□□□ -1.99
HMGCS2P54868 SNORA11.4-201ENST00000408823 129 ntBASIC2.59□□□□□ -1.99
HMGCS2P54868 AC007283.2-201ENST00000424739 197 ntBASIC2.59□□□□□ -1.99
HMGCS2P54868 TRIM60P10Y-201ENST00000425589 751 ntBASIC2.59□□□□□ -1.99
HMGCS2P54868 AC092427.1-202ENST00000430569 476 ntBASIC2.59□□□□□ -1.99
HMGCS2P54868 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC2.59□□□□□ -1.99
HMGCS2P54868 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.59□□□□□ -1.99
HMGCS2P54868 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC2.59□□□□□ -1.99
HMGCS2P54868 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC2.59□□□□□ -1.99
HMGCS2P54868 RNU6-420P-201ENST00000458780 107 ntBASIC2.59□□□□□ -1.99
HMGCS2P54868 MTCO3P7-201ENST00000510008 774 ntBASIC2.59□□□□□ -1.99
HMGCS2P54868 CDC42P4-201ENST00000510507 563 ntBASIC2.59□□□□□ -1.99
HMGCS2P54868 RNA5SP76-201ENST00000516277 87 ntBASIC2.59□□□□□ -1.99
HMGCS2P54868 OR5BN1P-201ENST00000532955 829 ntBASIC2.59□□□□□ -1.99
HMGCS2P54868 AP002453.2-201ENST00000533503 320 ntBASIC2.59□□□□□ -1.99
HMGCS2P54868 ARL2BPP2-201ENST00000550907 489 ntBASIC2.59□□□□□ -1.99
HMGCS2P54868 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC2.59□□□□□ -1.99
HMGCS2P54868 MIR3611-201ENST00000584484 83 ntBASIC2.59□□□□□ -1.99
HMGCS2P54868 AC013553.2-201ENST00000604244 589 ntBASIC2.59□□□□□ -1.99
HMGCS2P54868 AC019159.1-201ENST00000605094 187 ntBASIC2.59□□□□□ -1.99
HMGCS2P54868 AC104237.2-201ENST00000612456 443 ntBASIC2.59□□□□□ -1.99
HMGCS2P54868 AC004852.3-201ENST00000614131 326 ntBASIC2.59□□□□□ -1.99
HMGCS2P54868 SNHG22-203ENST00000617833 660 ntBASIC2.59□□□□□ -1.99
HMGCS2P54868 AC006338.1-201ENST00000618453 749 ntBASIC2.59□□□□□ -1.99
HMGCS2P54868 AC092656.1-203ENST00000624134 423 ntBASIC2.59□□□□□ -1.99
HMGCS2P54868 ZNF519P1-201ENST00000449011 1626 ntBASIC2.59□□□□□ -1.99
HMGCS2P54868 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC2.59□□□□□ -1.99
HMGCS2P54868 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC2.59□□□□□ -2
HMGCS2P54868 AC008669.1-201ENST00000565823 2178 ntBASIC2.59□□□□□ -2
HMGCS2P54868 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
HMGCS2P54868 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.58□□□□□ -2
HMGCS2P54868 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
HMGCS2P54868 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.58□□□□□ -2
HMGCS2P54868 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.58□□□□□ -2
HMGCS2P54868 RNU1-105P-201ENST00000363470 161 ntBASIC2.58□□□□□ -2
HMGCS2P54868 Y_RNA.194-201ENST00000363985 102 ntBASIC2.58□□□□□ -2
HMGCS2P54868 RNY4P34-201ENST00000364779 95 ntBASIC2.58□□□□□ -2
HMGCS2P54868 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.58□□□□□ -2
HMGCS2P54868 RNU6-1119P-201ENST00000384349 108 ntBASIC2.58□□□□□ -2
HMGCS2P54868 RNU6-278P-201ENST00000390945 109 ntBASIC2.58□□□□□ -2
HMGCS2P54868 RNA5SP354-201ENST00000391247 136 ntBASIC2.58□□□□□ -2
HMGCS2P54868 ELOCP17-201ENST00000414751 326 ntBASIC2.58□□□□□ -2
HMGCS2P54868 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC2.58□□□□□ -2
HMGCS2P54868 RPS15AP12-201ENST00000419498 388 ntBASIC2.58□□□□□ -2
HMGCS2P54868 AL589823.1-201ENST00000429577 183 ntBASIC2.58□□□□□ -2
HMGCS2P54868 DLGAP5P1-201ENST00000430307 464 ntBASIC2.58□□□□□ -2
HMGCS2P54868 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.58□□□□□ -2
HMGCS2P54868 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC2.58□□□□□ -2
HMGCS2P54868 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.58□□□□□ -2
HMGCS2P54868 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC2.58□□□□□ -2
HMGCS2P54868 ARPC3P1-201ENST00000437218 533 ntBASIC2.58□□□□□ -2
HMGCS2P54868 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC2.58□□□□□ -2
HMGCS2P54868 RPL21P2-201ENST00000440049 481 ntBASIC2.58□□□□□ -2
HMGCS2P54868 AC104058.1-201ENST00000448028 297 ntBASIC2.58□□□□□ -2
HMGCS2P54868 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.58□□□□□ -2
HMGCS2P54868 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC2.58□□□□□ -2
HMGCS2P54868 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.58□□□□□ -2
HMGCS2P54868 SCARNA15.2-201ENST00000516409 127 ntBASIC2.58□□□□□ -2
HMGCS2P54868 SNORA18.6-201ENST00000516792 115 ntBASIC2.58□□□□□ -2
HMGCS2P54868 HSPE1P18-201ENST00000517602 280 ntBASIC2.58□□□□□ -2
HMGCS2P54868 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.58□□□□□ -2
HMGCS2P54868 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.58□□□□□ -2
HMGCS2P54868 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC2.58□□□□□ -2
HMGCS2P54868 MTCYBP33-201ENST00000575007 1130 ntBASIC2.58□□□□□ -2
HMGCS2P54868 MIR3167-201ENST00000579623 85 ntBASIC2.58□□□□□ -2
HMGCS2P54868 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC2.58□□□□□ -2
HMGCS2P54868 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC2.58□□□□□ -2
HMGCS2P54868 AC103591.3-201ENST00000608684 209 ntBASIC2.58□□□□□ -2
HMGCS2P54868 AC006566.1-201ENST00000608943 513 ntBASIC2.58□□□□□ -2
HMGCS2P54868 AC013476.2-201ENST00000614456 459 ntBASIC2.58□□□□□ -2
HMGCS2P54868 MIR6733-201ENST00000635723 61 ntBASIC2.58□□□□□ -2
HMGCS2P54868 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
HMGCS2P54868 ANKRD26P2-201ENST00000445530 1710 ntBASIC2.57□□□□□ -2
HMGCS2P54868 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.57□□□□□ -2
HMGCS2P54868 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
HMGCS2P54868 FARSBP1-201ENST00000435808 1778 ntBASIC2.57□□□□□ -2
HMGCS2P54868 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC2.57□□□□□ -2
HMGCS2P54868 RNU4-75P-201ENST00000364621 146 ntBASIC2.57□□□□□ -2
HMGCS2P54868 RNU1-51P-201ENST00000365345 176 ntBASIC2.57□□□□□ -2
HMGCS2P54868 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC2.57□□□□□ -2
HMGCS2P54868 RNU6-482P-201ENST00000391068 107 ntBASIC2.57□□□□□ -2
HMGCS2P54868 SNORA26.7-201ENST00000391288 122 ntBASIC2.57□□□□□ -2
HMGCS2P54868 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.57□□□□□ -2
HMGCS2P54868 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.57□□□□□ -2
HMGCS2P54868 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
HMGCS2P54868 AL139397.2-201ENST00000404529 772 ntBASIC2.57□□□□□ -2
HMGCS2P54868 RNU2-36P-201ENST00000410361 191 ntBASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 120.9 ms