Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
COPB1P53618 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
COPB1P53618 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.56□□□□□ -1.84
COPB1P53618 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.56□□□□□ -1.84
COPB1P53618 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.56□□□□□ -1.84
COPB1P53618 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.55□□□□□ -1.84
COPB1P53618 RNU6-116P-201ENST00000384042 109 ntBASIC3.55□□□□□ -1.84
COPB1P53618 Y_RNA.530-201ENST00000384587 101 ntBASIC3.55□□□□□ -1.84
COPB1P53618 RNU6-817P-201ENST00000391083 104 ntBASIC3.55□□□□□ -1.84
COPB1P53618 RN7SKP140-201ENST00000411196 284 ntBASIC3.55□□□□□ -1.84
COPB1P53618 RPS20P15-201ENST00000412792 311 ntBASIC3.55□□□□□ -1.84
COPB1P53618 USP9YP20-201ENST00000419224 558 ntBASIC3.55□□□□□ -1.84
COPB1P53618 BX842559.1-201ENST00000419615 532 ntBASIC3.55□□□□□ -1.84
COPB1P53618 AL451054.2-201ENST00000420896 202 ntBASIC3.55□□□□□ -1.84
COPB1P53618 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.55□□□□□ -1.84
COPB1P53618 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.55□□□□□ -1.84
COPB1P53618 HMGB1P18-201ENST00000438801 619 ntBASIC3.55□□□□□ -1.84
COPB1P53618 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.55□□□□□ -1.84
COPB1P53618 AC083904.1-201ENST00000487828 231 ntBASIC3.55□□□□□ -1.84
COPB1P53618 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC3.55□□□□□ -1.84
COPB1P53618 GMPSP1-201ENST00000514075 579 ntBASIC3.55□□□□□ -1.84
COPB1P53618 SCARNA13-201ENST00000516672 275 ntBASIC3.55□□□□□ -1.84
COPB1P53618 RNU6-840P-201ENST00000517275 65 ntBASIC3.55□□□□□ -1.84
COPB1P53618 AP001804.3-201ENST00000525146 880 ntBASIC3.55□□□□□ -1.84
COPB1P53618 HPRT1P3-201ENST00000539521 576 ntBASIC3.55□□□□□ -1.84
COPB1P53618 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.55□□□□□ -1.84
COPB1P53618 MIR3922-201ENST00000585192 84 ntBASIC3.55□□□□□ -1.84
COPB1P53618 AC044792.1-201ENST00000593294 196 ntBASIC3.55□□□□□ -1.84
COPB1P53618 AC243960.4-201ENST00000600532 288 ntBASIC3.55□□□□□ -1.84
COPB1P53618 AL162713.1-201ENST00000604480 262 ntBASIC3.55□□□□□ -1.84
COPB1P53618 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC3.55□□□□□ -1.84
COPB1P53618 MIR8058-201ENST00000615737 89 ntBASIC3.55□□□□□ -1.84
COPB1P53618 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.55□□□□□ -1.84
COPB1P53618 AL133216.2-202ENST00000634512 349 ntBASIC3.55□□□□□ -1.84
COPB1P53618 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.55□□□□□ -1.84
COPB1P53618 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
COPB1P53618 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
COPB1P53618 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
COPB1P53618 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
COPB1P53618 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.55□□□□□ -1.84
COPB1P53618 SDAD1P2-201ENST00000441308 2028 ntBASIC3.54□□□□□ -1.84
COPB1P53618 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.54□□□□□ -1.84
COPB1P53618 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.54□□□□□ -1.84
COPB1P53618 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
COPB1P53618 Y_RNA.414-201ENST00000384011 101 ntBASIC3.54□□□□□ -1.84
COPB1P53618 EI24P2-201ENST00000397776 1076 ntBASIC3.54□□□□□ -1.84
COPB1P53618 HSPE1P26-201ENST00000405341 275 ntBASIC3.54□□□□□ -1.84
COPB1P53618 EI24P1-201ENST00000416584 867 ntBASIC3.54□□□□□ -1.84
COPB1P53618 SETP5-201ENST00000437270 562 ntBASIC3.54□□□□□ -1.84
COPB1P53618 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC3.54□□□□□ -1.84
COPB1P53618 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
COPB1P53618 FABP5P13-201ENST00000452144 328 ntBASIC3.54□□□□□ -1.84
COPB1P53618 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC3.54□□□□□ -1.84
COPB1P53618 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC3.54□□□□□ -1.84
COPB1P53618 AC108860.1-201ENST00000484521 383 ntBASIC3.54□□□□□ -1.84
COPB1P53618 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC3.54□□□□□ -1.84
COPB1P53618 SNORA19.2-201ENST00000516013 114 ntBASIC3.54□□□□□ -1.84
COPB1P53618 RNU6-864P-201ENST00000516256 108 ntBASIC3.54□□□□□ -1.84
COPB1P53618 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.54□□□□□ -1.84
COPB1P53618 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.54□□□□□ -1.84
COPB1P53618 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.54□□□□□ -1.84
COPB1P53618 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.54□□□□□ -1.84
COPB1P53618 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.54□□□□□ -1.84
COPB1P53618 AL670379.4-201ENST00000605279 254 ntBASIC3.54□□□□□ -1.84
COPB1P53618 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC3.54□□□□□ -1.84
COPB1P53618 Z82243.1-201ENST00000609432 473 ntBASIC3.54□□□□□ -1.84
COPB1P53618 AC009570.1-201ENST00000609599 745 ntBASIC3.54□□□□□ -1.84
COPB1P53618 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.54□□□□□ -1.84
COPB1P53618 AL442067.2-201ENST00000614033 363 ntBASIC3.54□□□□□ -1.84
COPB1P53618 RMST_7.1-201ENST00000621935 268 ntBASIC3.54□□□□□ -1.84
COPB1P53618 AP003400.5-201ENST00000624827 617 ntBASIC3.54□□□□□ -1.84
COPB1P53618 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.54□□□□□ -1.84
COPB1P53618 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.54□□□□□ -1.84
COPB1P53618 HSPA8P4-201ENST00000511877 1920 ntBASIC3.54□□□□□ -1.84
COPB1P53618 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.53□□□□□ -1.84
COPB1P53618 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.53□□□□□ -1.84
COPB1P53618 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.53□□□□□ -1.84
COPB1P53618 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
COPB1P53618 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
COPB1P53618 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
COPB1P53618 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.53□□□□□ -1.84
COPB1P53618 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
COPB1P53618 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
COPB1P53618 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
COPB1P53618 RNA5SP50-201ENST00000363731 107 ntBASIC3.53□□□□□ -1.84
COPB1P53618 RNU6-190P-201ENST00000384154 102 ntBASIC3.53□□□□□ -1.84
COPB1P53618 MIR634-201ENST00000385208 97 ntBASIC3.53□□□□□ -1.84
COPB1P53618 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
COPB1P53618 SNORA16.2-201ENST00000390991 127 ntBASIC3.53□□□□□ -1.84
COPB1P53618 POLHP1-201ENST00000411806 470 ntBASIC3.53□□□□□ -1.84
COPB1P53618 NCOR1P3-201ENST00000420479 303 ntBASIC3.53□□□□□ -1.84
COPB1P53618 AL669831.1-202ENST00000428504 417 ntBASIC3.53□□□□□ -1.84
COPB1P53618 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.53□□□□□ -1.84
COPB1P53618 GTF2IP13-201ENST00000438487 386 ntBASIC3.53□□□□□ -1.84
COPB1P53618 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC3.53□□□□□ -1.84
COPB1P53618 AC104058.1-201ENST00000448028 297 ntBASIC3.53□□□□□ -1.84
COPB1P53618 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.53□□□□□ -1.84
COPB1P53618 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.53□□□□□ -1.84
COPB1P53618 MLLT10P2-201ENST00000506434 249 ntBASIC3.53□□□□□ -1.84
COPB1P53618 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 117.8 ms