Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 HSPE1P8-201ENST00000406997 288 ntBASIC4.7□□□□□ -1.66
USP11P51784 MIR1250-201ENST00000408098 113 ntBASIC4.7□□□□□ -1.66
USP11P51784 MIR1193-201ENST00000408109 78 ntBASIC4.7□□□□□ -1.66
USP11P51784 Y_RNA.592-201ENST00000410274 109 ntBASIC4.7□□□□□ -1.66
USP11P51784 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.7□□□□□ -1.66
USP11P51784 RN7SL604P-201ENST00000492589 296 ntBASIC4.7□□□□□ -1.66
USP11P51784 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC4.7□□□□□ -1.66
USP11P51784 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.7□□□□□ -1.66
USP11P51784 AMZ2P1-203ENST00000565833 850 ntBASIC4.7□□□□□ -1.66
USP11P51784 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.7□□□□□ -1.66
USP11P51784 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC4.7□□□□□ -1.66
USP11P51784 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.7□□□□□ -1.66
USP11P51784 AC006557.5-201ENST00000603126 811 ntBASIC4.7□□□□□ -1.66
USP11P51784 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.7□□□□□ -1.66
USP11P51784 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
USP11P51784 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.7□□□□□ -1.66
USP11P51784 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
USP11P51784 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
USP11P51784 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
USP11P51784 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.69□□□□□ -1.66
USP11P51784 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.69□□□□□ -1.66
USP11P51784 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.69□□□□□ -1.66
USP11P51784 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
USP11P51784 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
USP11P51784 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
USP11P51784 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
USP11P51784 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
USP11P51784 RNU6-1155P-201ENST00000363554 107 ntBASIC4.69□□□□□ -1.66
USP11P51784 Y_RNA.277-201ENST00000364754 102 ntBASIC4.69□□□□□ -1.66
USP11P51784 Y_RNA.324-201ENST00000365165 102 ntBASIC4.69□□□□□ -1.66
USP11P51784 Y_RNA.458-201ENST00000384240 102 ntBASIC4.69□□□□□ -1.66
USP11P51784 SNORA69.1-201ENST00000390904 137 ntBASIC4.69□□□□□ -1.66
USP11P51784 AL591034.2-201ENST00000402839 359 ntBASIC4.69□□□□□ -1.66
USP11P51784 AL513475.1-201ENST00000406602 315 ntBASIC4.69□□□□□ -1.66
USP11P51784 AL356095.1-201ENST00000417217 199 ntBASIC4.69□□□□□ -1.66
USP11P51784 AL353621.1-201ENST00000418219 243 ntBASIC4.69□□□□□ -1.66
USP11P51784 RPS15AP6-201ENST00000420703 385 ntBASIC4.69□□□□□ -1.66
USP11P51784 AL606753.1-201ENST00000427435 87 ntBASIC4.69□□□□□ -1.66
USP11P51784 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.69□□□□□ -1.66
USP11P51784 PRDX3P3-201ENST00000447765 522 ntBASIC4.69□□□□□ -1.66
USP11P51784 RPS11P1-201ENST00000451072 473 ntBASIC4.69□□□□□ -1.66
USP11P51784 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.69□□□□□ -1.66
USP11P51784 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC4.69□□□□□ -1.66
USP11P51784 RNU6-1095P-201ENST00000516148 108 ntBASIC4.69□□□□□ -1.66
USP11P51784 RNA5SP154-201ENST00000516193 111 ntBASIC4.69□□□□□ -1.66
USP11P51784 DEFB108E-201ENST00000524692 240 ntBASIC4.69□□□□□ -1.66
USP11P51784 AL121917.1-203ENST00000605534 577 ntBASIC4.69□□□□□ -1.66
USP11P51784 AC004825.2-201ENST00000616634 455 ntBASIC4.69□□□□□ -1.66
USP11P51784 AC008785.1-201ENST00000624475 456 ntBASIC4.69□□□□□ -1.66
USP11P51784 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
USP11P51784 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC4.69□□□□□ -1.66
USP11P51784 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
USP11P51784 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
USP11P51784 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
USP11P51784 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
USP11P51784 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.69□□□□□ -1.66
USP11P51784 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
USP11P51784 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
USP11P51784 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
USP11P51784 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
USP11P51784 ANKRD36BP1-201ENST00000358576 1779 ntBASIC4.68□□□□□ -1.66
USP11P51784 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
USP11P51784 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
USP11P51784 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.68□□□□□ -1.66
USP11P51784 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.68□□□□□ -1.66
USP11P51784 HSPA8P1-201ENST00000425843 1833 ntBASIC4.68□□□□□ -1.66
USP11P51784 AC027290.2-201ENST00000623210 18662 ntBASIC4.68□□□□□ -1.66
USP11P51784 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
USP11P51784 RNU1-76P-201ENST00000362903 159 ntBASIC4.68□□□□□ -1.66
USP11P51784 Y_RNA.352-201ENST00000365439 102 ntBASIC4.68□□□□□ -1.66
USP11P51784 RNU6-125P-201ENST00000384505 107 ntBASIC4.68□□□□□ -1.66
USP11P51784 RPS6P12-201ENST00000432491 726 ntBASIC4.68□□□□□ -1.66
USP11P51784 AL159987.2-201ENST00000432754 307 ntBASIC4.68□□□□□ -1.66
USP11P51784 AC069285.2-201ENST00000440210 275 ntBASIC4.68□□□□□ -1.66
USP11P51784 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.68□□□□□ -1.66
USP11P51784 RANP8-201ENST00000444720 713 ntBASIC4.68□□□□□ -1.66
USP11P51784 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
USP11P51784 RN7SL585P-201ENST00000470538 280 ntBASIC4.68□□□□□ -1.66
USP11P51784 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.68□□□□□ -1.66
USP11P51784 RNU1-86P-201ENST00000516108 154 ntBASIC4.68□□□□□ -1.66
USP11P51784 RNU4-71P-201ENST00000516258 113 ntBASIC4.68□□□□□ -1.66
USP11P51784 RNU1-107P-201ENST00000516617 154 ntBASIC4.68□□□□□ -1.66
USP11P51784 IGKV2-23-201ENST00000518729 323 ntBASIC4.68□□□□□ -1.66
USP11P51784 IFITM8P-201ENST00000522529 394 ntBASIC4.68□□□□□ -1.66
USP11P51784 AC008489.1-201ENST00000524271 483 ntBASIC4.68□□□□□ -1.66
USP11P51784 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.68□□□□□ -1.66
USP11P51784 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.68□□□□□ -1.66
USP11P51784 BNIP3P5-201ENST00000562290 498 ntBASIC4.68□□□□□ -1.66
USP11P51784 AC005951.2-201ENST00000576282 495 ntBASIC4.68□□□□□ -1.66
USP11P51784 MIR5696-201ENST00000578474 85 ntBASIC4.68□□□□□ -1.66
USP11P51784 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.68□□□□□ -1.66
USP11P51784 AL591034.3-201ENST00000605511 685 ntBASIC4.68□□□□□ -1.66
USP11P51784 AC112484.5-201ENST00000624189 228 ntBASIC4.68□□□□□ -1.66
USP11P51784 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.68□□□□□ -1.66
USP11P51784 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
USP11P51784 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
USP11P51784 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
USP11P51784 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
USP11P51784 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.68□□□□□ -1.66
USP11P51784 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms