Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 MIR15A-201ENST00000607334 83 ntBASIC2.83□□□□□ -1.96
LHX1P48742 AC012409.4-201ENST00000612923 249 ntBASIC2.83□□□□□ -1.96
LHX1P48742 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
LHX1P48742 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
LHX1P48742 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
LHX1P48742 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC2.82□□□□□ -1.96
LHX1P48742 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
LHX1P48742 RNU1-105P-201ENST00000363470 161 ntBASIC2.82□□□□□ -1.96
LHX1P48742 OR5H15-201ENST00000383696 930 ntBASIC2.82□□□□□ -1.96
LHX1P48742 RNU5A-6P-201ENST00000384136 116 ntBASIC2.82□□□□□ -1.96
LHX1P48742 Y_RNA.500-201ENST00000384466 111 ntBASIC2.82□□□□□ -1.96
LHX1P48742 Y_RNA.534-201ENST00000384599 112 ntBASIC2.82□□□□□ -1.96
LHX1P48742 MIR1-2-201ENST00000384961 85 ntBASIC2.82□□□□□ -1.96
LHX1P48742 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
LHX1P48742 Y_RNA.582-201ENST00000391023 95 ntBASIC2.82□□□□□ -1.96
LHX1P48742 UBE2V1P2-201ENST00000397758 440 ntBASIC2.82□□□□□ -1.96
LHX1P48742 RPS4XP8-201ENST00000402039 771 ntBASIC2.82□□□□□ -1.96
LHX1P48742 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.82□□□□□ -1.96
LHX1P48742 NDUFS5P4-201ENST00000412983 318 ntBASIC2.82□□□□□ -1.96
LHX1P48742 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC2.82□□□□□ -1.96
LHX1P48742 RPL26P27-201ENST00000414397 437 ntBASIC2.82□□□□□ -1.96
LHX1P48742 AL591704.1-201ENST00000432574 275 ntBASIC2.82□□□□□ -1.96
LHX1P48742 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.82□□□□□ -1.96
LHX1P48742 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.82□□□□□ -1.96
LHX1P48742 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC2.82□□□□□ -1.96
LHX1P48742 AL590639.1-201ENST00000456484 337 ntBASIC2.82□□□□□ -1.96
LHX1P48742 RPS3AP17-201ENST00000472594 777 ntBASIC2.82□□□□□ -1.96
LHX1P48742 AC126182.1-201ENST00000478134 357 ntBASIC2.82□□□□□ -1.96
LHX1P48742 AC023194.1-201ENST00000493084 308 ntBASIC2.82□□□□□ -1.96
LHX1P48742 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.82□□□□□ -1.96
LHX1P48742 AC109927.2-201ENST00000506416 303 ntBASIC2.82□□□□□ -1.96
LHX1P48742 MTCO3P7-201ENST00000510008 774 ntBASIC2.82□□□□□ -1.96
LHX1P48742 RAC1P5-201ENST00000512182 576 ntBASIC2.82□□□□□ -1.96
LHX1P48742 RNU6-123P-201ENST00000516163 102 ntBASIC2.82□□□□□ -1.96
LHX1P48742 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC2.82□□□□□ -1.96
LHX1P48742 MTCYBP20-201ENST00000524239 1129 ntBASIC2.82□□□□□ -1.96
LHX1P48742 AP003392.2-201ENST00000527269 208 ntBASIC2.82□□□□□ -1.96
LHX1P48742 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
LHX1P48742 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
LHX1P48742 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.82□□□□□ -1.96
LHX1P48742 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
LHX1P48742 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC2.82□□□□□ -1.96
LHX1P48742 MIR4635-201ENST00000583759 79 ntBASIC2.82□□□□□ -1.96
LHX1P48742 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.82□□□□□ -1.96
LHX1P48742 AC091805.2-201ENST00000603848 235 ntBASIC2.82□□□□□ -1.96
LHX1P48742 AL355598.1-201ENST00000604169 202 ntBASIC2.82□□□□□ -1.96
LHX1P48742 AC103591.3-201ENST00000608684 209 ntBASIC2.82□□□□□ -1.96
LHX1P48742 AC104073.3-201ENST00000610942 955 ntBASIC2.82□□□□□ -1.96
LHX1P48742 AC025034.2-201ENST00000623264 286 ntBASIC2.82□□□□□ -1.96
LHX1P48742 AC093648.1-201ENST00000623546 606 ntBASIC2.82□□□□□ -1.96
LHX1P48742 CR381653.2-201ENST00000624041 768 ntBASIC2.82□□□□□ -1.96
LHX1P48742 AC084035.1-201ENST00000634543 607 ntBASIC2.82□□□□□ -1.96
LHX1P48742 AC110079.1-202ENST00000635213 138 ntBASIC2.82□□□□□ -1.96
LHX1P48742 U2.21-201ENST00000637295 81 ntBASIC2.82□□□□□ -1.96
LHX1P48742 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.82□□□□□ -1.96
LHX1P48742 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
LHX1P48742 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
LHX1P48742 AC103710.2-202ENST00000641454 2853 ntBASIC2.81□□□□□ -1.96
LHX1P48742 RNU6-778P-201ENST00000363269 103 ntBASIC2.81□□□□□ -1.96
LHX1P48742 RNU6-61P-201ENST00000365528 109 ntBASIC2.81□□□□□ -1.96
LHX1P48742 RNU1-73P-201ENST00000383971 164 ntBASIC2.81□□□□□ -1.96
LHX1P48742 RNU6-74P-201ENST00000384235 107 ntBASIC2.81□□□□□ -1.96
LHX1P48742 MIR767-201ENST00000390228 109 ntBASIC2.81□□□□□ -1.96
LHX1P48742 RNA5SP354-201ENST00000391247 136 ntBASIC2.81□□□□□ -1.96
LHX1P48742 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
LHX1P48742 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC2.81□□□□□ -1.96
LHX1P48742 RPLP0P7-201ENST00000416050 667 ntBASIC2.81□□□□□ -1.96
LHX1P48742 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC2.81□□□□□ -1.96
LHX1P48742 SKA2P1-201ENST00000425592 390 ntBASIC2.81□□□□□ -1.96
LHX1P48742 AL365496.1-201ENST00000426885 215 ntBASIC2.81□□□□□ -1.96
LHX1P48742 MTCO2P11-201ENST00000431069 680 ntBASIC2.81□□□□□ -1.96
LHX1P48742 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC2.81□□□□□ -1.96
LHX1P48742 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC2.81□□□□□ -1.96
LHX1P48742 AC132479.1-201ENST00000449160 144 ntBASIC2.81□□□□□ -1.96
LHX1P48742 AC022364.2-201ENST00000457963 554 ntBASIC2.81□□□□□ -1.96
LHX1P48742 RPS29P12-201ENST00000460178 152 ntBASIC2.81□□□□□ -1.96
LHX1P48742 UBE2DNL-203ENST00000474922 222 ntBASIC2.81□□□□□ -1.96
LHX1P48742 AC139453.3-201ENST00000493276 369 ntBASIC2.81□□□□□ -1.96
LHX1P48742 SUMO2P6-201ENST00000505273 288 ntBASIC2.81□□□□□ -1.96
LHX1P48742 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC2.81□□□□□ -1.96
LHX1P48742 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC2.81□□□□□ -1.96
LHX1P48742 AC010493.1-201ENST00000513479 292 ntBASIC2.81□□□□□ -1.96
LHX1P48742 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.81□□□□□ -1.96
LHX1P48742 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC2.81□□□□□ -1.96
LHX1P48742 AP003122.3-201ENST00000526316 255 ntBASIC2.81□□□□□ -1.96
LHX1P48742 AC084851.1-201ENST00000529105 249 ntBASIC2.81□□□□□ -1.96
LHX1P48742 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.81□□□□□ -1.96
LHX1P48742 SUB1P2-201ENST00000556401 297 ntBASIC2.81□□□□□ -1.96
LHX1P48742 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.81□□□□□ -1.96
LHX1P48742 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC2.81□□□□□ -1.96
LHX1P48742 AC012119.1-201ENST00000603184 222 ntBASIC2.81□□□□□ -1.96
LHX1P48742 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
LHX1P48742 AC136475.10-201ENST00000620253 385 ntBASIC2.81□□□□□ -1.96
LHX1P48742 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
LHX1P48742 MTND4P35-201ENST00000604257 1375 ntBASIC2.81□□□□□ -1.96
LHX1P48742 AC008669.1-201ENST00000565823 2178 ntBASIC2.81□□□□□ -1.96
LHX1P48742 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
LHX1P48742 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.8□□□□□ -1.96
LHX1P48742 AL136360.1-201ENST00000503377 1900 ntBASIC2.8□□□□□ -1.96
LHX1P48742 MTND5P17-201ENST00000418405 1603 ntBASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms