Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 AC025755.1-201ENST00000521306 278 ntBASIC3.18□□□□□ -1.9
SOX2P48431 IMMP1LP2-201ENST00000552954 492 ntBASIC3.18□□□□□ -1.9
SOX2P48431 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SOX2P48431 AC100830.2-201ENST00000581636 240 ntBASIC3.18□□□□□ -1.9
SOX2P48431 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC3.18□□□□□ -1.9
SOX2P48431 AL606490.9-201ENST00000603331 271 ntBASIC3.18□□□□□ -1.9
SOX2P48431 RNU6-85P-201ENST00000605989 107 ntBASIC3.18□□□□□ -1.9
SOX2P48431 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SOX2P48431 AC007742.2-201ENST00000618226 398 ntBASIC3.18□□□□□ -1.9
SOX2P48431 AL359757.2-201ENST00000624309 274 ntBASIC3.18□□□□□ -1.9
SOX2P48431 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC3.18□□□□□ -1.9
SOX2P48431 AC099654.10-201ENST00000640395 161 ntBASIC3.18□□□□□ -1.9
SOX2P48431 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.18□□□□□ -1.9
SOX2P48431 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.18□□□□□ -1.9
SOX2P48431 MFSD8-236ENST00000641509 4050 ntBASIC3.18□□□□□ -1.9
SOX2P48431 FAM35BP-202ENST00000497389 3337 ntBASIC3.18□□□□□ -1.9
SOX2P48431 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
SOX2P48431 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SOX2P48431 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SOX2P48431 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
SOX2P48431 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
SOX2P48431 AC138393.1-203ENST00000327086 343 ntBASIC3.17□□□□□ -1.9
SOX2P48431 AC126755.2-208ENST00000327792 462 ntBASIC3.17□□□□□ -1.9
SOX2P48431 AC138969.1-213ENST00000331436 462 ntBASIC3.17□□□□□ -1.9
SOX2P48431 SNORD3E-201ENST00000362899 217 ntBASIC3.17□□□□□ -1.9
SOX2P48431 Y_RNA.315-201ENST00000365117 102 ntBASIC3.17□□□□□ -1.9
SOX2P48431 RNU4-14P-201ENST00000410858 122 ntBASIC3.17□□□□□ -1.9
SOX2P48431 UBE2D3P2-201ENST00000424409 445 ntBASIC3.17□□□□□ -1.9
SOX2P48431 RPL7P37-201ENST00000425095 738 ntBASIC3.17□□□□□ -1.9
SOX2P48431 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.17□□□□□ -1.9
SOX2P48431 AC130509.1-201ENST00000464158 433 ntBASIC3.17□□□□□ -1.9
SOX2P48431 RN7SL330P-201ENST00000469709 307 ntBASIC3.17□□□□□ -1.9
SOX2P48431 AC010618.1-201ENST00000469924 477 ntBASIC3.17□□□□□ -1.9
SOX2P48431 AC084357.1-201ENST00000473404 255 ntBASIC3.17□□□□□ -1.9
SOX2P48431 AC139453.3-201ENST00000493276 369 ntBASIC3.17□□□□□ -1.9
SOX2P48431 RN7SL323P-201ENST00000494712 295 ntBASIC3.17□□□□□ -1.9
SOX2P48431 AC108043.1-201ENST00000512696 574 ntBASIC3.17□□□□□ -1.9
SOX2P48431 RN7SKP13-201ENST00000515933 244 ntBASIC3.17□□□□□ -1.9
SOX2P48431 SCARNA14-201ENST00000516903 136 ntBASIC3.17□□□□□ -1.9
SOX2P48431 TGIF1P1-201ENST00000558095 802 ntBASIC3.17□□□□□ -1.9
SOX2P48431 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC3.17□□□□□ -1.9
SOX2P48431 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.17□□□□□ -1.9
SOX2P48431 AC006077.1-201ENST00000604746 343 ntBASIC3.17□□□□□ -1.9
SOX2P48431 ATP5A1P2-202ENST00000616464 443 ntBASIC3.17□□□□□ -1.9
SOX2P48431 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SOX2P48431 AC010378.1-201ENST00000619270 362 ntBASIC3.17□□□□□ -1.9
SOX2P48431 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.17□□□□□ -1.9
SOX2P48431 AP000553.6-201ENST00000641242 118 ntBASIC3.17□□□□□ -1.9
SOX2P48431 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.17□□□□□ -1.9
SOX2P48431 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SOX2P48431 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.17□□□□□ -1.9
SOX2P48431 AC118273.1-201ENST00000525324 3006 ntBASIC3.17□□□□□ -1.9
SOX2P48431 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SOX2P48431 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.16□□□□□ -1.9
SOX2P48431 ZNF736P3Y-201ENST00000428264 1465 ntBASIC3.16□□□□□ -1.9
SOX2P48431 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SOX2P48431 AC022336.2-201ENST00000568966 2538 ntBASIC3.16□□□□□ -1.9
SOX2P48431 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
SOX2P48431 Y_RNA.482-201ENST00000384377 111 ntBASIC3.16□□□□□ -1.9
SOX2P48431 RNU6-601P-201ENST00000384540 107 ntBASIC3.16□□□□□ -1.9
SOX2P48431 MIR1302-11-201ENST00000408051 138 ntBASIC3.16□□□□□ -1.9
SOX2P48431 MIR1302-9-201ENST00000408365 138 ntBASIC3.16□□□□□ -1.9
SOX2P48431 SNORA3.3-201ENST00000408712 125 ntBASIC3.16□□□□□ -1.9
SOX2P48431 MIR1302-10-201ENST00000408734 138 ntBASIC3.16□□□□□ -1.9
SOX2P48431 RNU6-370P-201ENST00000411008 104 ntBASIC3.16□□□□□ -1.9
SOX2P48431 Y_RNA.623-201ENST00000411128 95 ntBASIC3.16□□□□□ -1.9
SOX2P48431 RPS15AP6-201ENST00000420703 385 ntBASIC3.16□□□□□ -1.9
SOX2P48431 AC007560.1-201ENST00000426912 237 ntBASIC3.16□□□□□ -1.9
SOX2P48431 TOMM20P4-201ENST00000427861 435 ntBASIC3.16□□□□□ -1.9
SOX2P48431 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.16□□□□□ -1.9
SOX2P48431 AL583843.1-201ENST00000456070 346 ntBASIC3.16□□□□□ -1.9
SOX2P48431 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.16□□□□□ -1.9
SOX2P48431 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.16□□□□□ -1.9
SOX2P48431 AL135752.1-201ENST00000479477 471 ntBASIC3.16□□□□□ -1.9
SOX2P48431 AC096745.1-201ENST00000509945 370 ntBASIC3.16□□□□□ -1.9
SOX2P48431 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC3.16□□□□□ -1.9
SOX2P48431 SNORA31.19-201ENST00000517079 126 ntBASIC3.16□□□□□ -1.9
SOX2P48431 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.16□□□□□ -1.9
SOX2P48431 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC3.16□□□□□ -1.9
SOX2P48431 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC3.16□□□□□ -1.9
SOX2P48431 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.16□□□□□ -1.9
SOX2P48431 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.16□□□□□ -1.9
SOX2P48431 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.16□□□□□ -1.9
SOX2P48431 OR1M4P-201ENST00000589199 287 ntBASIC3.16□□□□□ -1.9
SOX2P48431 AC007938.3-201ENST00000604965 623 ntBASIC3.16□□□□□ -1.9
SOX2P48431 MIR1302-2-201ENST00000607096 138 ntBASIC3.16□□□□□ -1.9
SOX2P48431 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC3.16□□□□□ -1.9
SOX2P48431 AL133215.3-201ENST00000609801 448 ntBASIC3.16□□□□□ -1.9
SOX2P48431 RMST_8.1-201ENST00000610287 165 ntBASIC3.16□□□□□ -1.9
SOX2P48431 MIR6748-201ENST00000610433 71 ntBASIC3.16□□□□□ -1.9
SOX2P48431 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC3.16□□□□□ -1.9
SOX2P48431 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.16□□□□□ -1.9
SOX2P48431 FP236240.3-201ENST00000623061 327 ntBASIC3.16□□□□□ -1.9
SOX2P48431 AC027309.3-201ENST00000623419 351 ntBASIC3.16□□□□□ -1.9
SOX2P48431 MTND4LP32-201ENST00000636111 270 ntBASIC3.16□□□□□ -1.9
SOX2P48431 MIR492-201ENST00000638676 116 ntBASIC3.16□□□□□ -1.9
SOX2P48431 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
SOX2P48431 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.16□□□□□ -1.9
SOX2P48431 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC3.16□□□□□ -1.9
SOX2P48431 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms