Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 RPL21P16-201ENST00000495531 483 ntBASIC3.04□□□□□ -1.92
HADHAP40939 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.04□□□□□ -1.92
HADHAP40939 AC091133.4-201ENST00000511142 308 ntBASIC3.04□□□□□ -1.92
HADHAP40939 RNU6-572P-201ENST00000516724 80 ntBASIC3.04□□□□□ -1.92
HADHAP40939 RNU6-1183P-201ENST00000517054 60 ntBASIC3.04□□□□□ -1.92
HADHAP40939 AC025755.1-201ENST00000521306 278 ntBASIC3.04□□□□□ -1.92
HADHAP40939 AP000889.1-201ENST00000530968 660 ntBASIC3.04□□□□□ -1.92
HADHAP40939 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.04□□□□□ -1.92
HADHAP40939 AC010546.1-201ENST00000569391 485 ntBASIC3.04□□□□□ -1.92
HADHAP40939 AC007151.1-201ENST00000572774 483 ntBASIC3.04□□□□□ -1.92
HADHAP40939 AC098614.4-201ENST00000607601 462 ntBASIC3.04□□□□□ -1.92
HADHAP40939 AL162274.2-201ENST00000614406 332 ntBASIC3.04□□□□□ -1.92
HADHAP40939 AC073534.2-201ENST00000620377 381 ntBASIC3.04□□□□□ -1.92
HADHAP40939 AC024940.5-201ENST00000622889 474 ntBASIC3.04□□□□□ -1.92
HADHAP40939 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
HADHAP40939 ADAM3A-203ENST00000461344 2157 ntBASIC3.04□□□□□ -1.92
HADHAP40939 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
HADHAP40939 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.03□□□□□ -1.92
HADHAP40939 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.03□□□□□ -1.92
HADHAP40939 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.03□□□□□ -1.92
HADHAP40939 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
HADHAP40939 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
HADHAP40939 MIR412-201ENST00000362142 91 ntBASIC3.03□□□□□ -1.92
HADHAP40939 RNU6-1120P-201ENST00000362988 108 ntBASIC3.03□□□□□ -1.92
HADHAP40939 Y_RNA.111-201ENST00000363248 100 ntBASIC3.03□□□□□ -1.92
HADHAP40939 RNU6-1180P-201ENST00000364935 107 ntBASIC3.03□□□□□ -1.92
HADHAP40939 SNORD115-7-201ENST00000365306 82 ntBASIC3.03□□□□□ -1.92
HADHAP40939 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
HADHAP40939 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
HADHAP40939 UBA52P6-201ENST00000399822 382 ntBASIC3.03□□□□□ -1.92
HADHAP40939 MIR887-201ENST00000401258 79 ntBASIC3.03□□□□□ -1.92
HADHAP40939 AL138885.1-201ENST00000405921 675 ntBASIC3.03□□□□□ -1.92
HADHAP40939 GSTA9P-201ENST00000406231 611 ntBASIC3.03□□□□□ -1.92
HADHAP40939 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC3.03□□□□□ -1.92
HADHAP40939 AL139281.1-201ENST00000422120 335 ntBASIC3.03□□□□□ -1.92
HADHAP40939 AC073464.1-201ENST00000429823 534 ntBASIC3.03□□□□□ -1.92
HADHAP40939 MYL8P-204ENST00000431574 518 ntBASIC3.03□□□□□ -1.92
HADHAP40939 AL358934.1-201ENST00000432346 324 ntBASIC3.03□□□□□ -1.92
HADHAP40939 OSTCP8-201ENST00000445117 448 ntBASIC3.03□□□□□ -1.92
HADHAP40939 NDUFB1P2-201ENST00000449477 176 ntBASIC3.03□□□□□ -1.92
HADHAP40939 NIPA2P5-201ENST00000452282 464 ntBASIC3.03□□□□□ -1.92
HADHAP40939 AC006445.1-201ENST00000491925 405 ntBASIC3.03□□□□□ -1.92
HADHAP40939 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC3.03□□□□□ -1.92
HADHAP40939 SCARNA13-201ENST00000516672 275 ntBASIC3.03□□□□□ -1.92
HADHAP40939 SNORA31.19-201ENST00000517079 126 ntBASIC3.03□□□□□ -1.92
HADHAP40939 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.03□□□□□ -1.92
HADHAP40939 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.03□□□□□ -1.92
HADHAP40939 AP002404.1-201ENST00000532005 451 ntBASIC3.03□□□□□ -1.92
HADHAP40939 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.03□□□□□ -1.92
HADHAP40939 SUB1P2-201ENST00000556401 297 ntBASIC3.03□□□□□ -1.92
HADHAP40939 LINC00933-203ENST00000559812 219 ntBASIC3.03□□□□□ -1.92
HADHAP40939 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.03□□□□□ -1.92
HADHAP40939 MIR548AC-201ENST00000585049 88 ntBASIC3.03□□□□□ -1.92
HADHAP40939 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.03□□□□□ -1.92
HADHAP40939 AL451007.1-201ENST00000595491 289 ntBASIC3.03□□□□□ -1.92
HADHAP40939 AL138889.2-201ENST00000603883 242 ntBASIC3.03□□□□□ -1.92
HADHAP40939 Z84480.1-201ENST00000605131 311 ntBASIC3.03□□□□□ -1.92
HADHAP40939 AL627309.6-201ENST00000606857 840 ntBASIC3.03□□□□□ -1.92
HADHAP40939 LRRC77P-213ENST00000637727 880 ntBASIC3.03□□□□□ -1.92
HADHAP40939 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.03□□□□□ -1.92
HADHAP40939 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
HADHAP40939 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
HADHAP40939 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.03□□□□□ -1.92
HADHAP40939 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
HADHAP40939 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
HADHAP40939 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.02□□□□□ -1.93
HADHAP40939 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.02□□□□□ -1.93
HADHAP40939 AC010889.1-201ENST00000566193 2666 ntBASIC3.02□□□□□ -1.93
HADHAP40939 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC3.02□□□□□ -1.93
HADHAP40939 MIR422A-201ENST00000362286 90 ntBASIC3.02□□□□□ -1.93
HADHAP40939 Y_RNA.194-201ENST00000363985 102 ntBASIC3.02□□□□□ -1.93
HADHAP40939 SNORA71.1-201ENST00000364523 117 ntBASIC3.02□□□□□ -1.93
HADHAP40939 Y_RNA.296-201ENST00000364930 108 ntBASIC3.02□□□□□ -1.93
HADHAP40939 RNU1-140P-201ENST00000365040 165 ntBASIC3.02□□□□□ -1.93
HADHAP40939 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.02□□□□□ -1.93
HADHAP40939 Y_RNA.576-201ENST00000384781 102 ntBASIC3.02□□□□□ -1.93
HADHAP40939 MIR1-2-201ENST00000384961 85 ntBASIC3.02□□□□□ -1.93
HADHAP40939 CISD1P1-201ENST00000393907 327 ntBASIC3.02□□□□□ -1.93
HADHAP40939 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
HADHAP40939 RNU2-16P-201ENST00000410712 136 ntBASIC3.02□□□□□ -1.93
HADHAP40939 OR51A5P-201ENST00000415429 942 ntBASIC3.02□□□□□ -1.93
HADHAP40939 MTATP6P18-201ENST00000417994 673 ntBASIC3.02□□□□□ -1.93
HADHAP40939 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC3.02□□□□□ -1.93
HADHAP40939 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.02□□□□□ -1.93
HADHAP40939 AL590639.1-201ENST00000456484 337 ntBASIC3.02□□□□□ -1.93
HADHAP40939 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.02□□□□□ -1.93
HADHAP40939 LAMTOR3P2-201ENST00000504479 232 ntBASIC3.02□□□□□ -1.93
HADHAP40939 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.02□□□□□ -1.93
HADHAP40939 RNA5SP341-201ENST00000516261 117 ntBASIC3.02□□□□□ -1.93
HADHAP40939 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC3.02□□□□□ -1.93
HADHAP40939 OR5AL2P-201ENST00000532185 920 ntBASIC3.02□□□□□ -1.93
HADHAP40939 AC107016.2-201ENST00000547968 190 ntBASIC3.02□□□□□ -1.93
HADHAP40939 MTCYBP33-201ENST00000575007 1130 ntBASIC3.02□□□□□ -1.93
HADHAP40939 MIR4775-201ENST00000581168 75 ntBASIC3.02□□□□□ -1.93
HADHAP40939 AC091805.2-201ENST00000603848 235 ntBASIC3.02□□□□□ -1.93
HADHAP40939 AL645944.1-201ENST00000603857 493 ntBASIC3.02□□□□□ -1.93
HADHAP40939 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.02□□□□□ -1.93
HADHAP40939 AC104073.3-201ENST00000610942 955 ntBASIC3.02□□□□□ -1.93
HADHAP40939 MIR6134-201ENST00000617606 109 ntBASIC3.02□□□□□ -1.93
HADHAP40939 U6.42-201ENST00000618440 107 ntBASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms