Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 AC013410.2-201ENST00000422627 201 ntBASIC0.65□□□□□ -2.31
SNCAP37840 AL606490.4-201ENST00000423117 127 ntBASIC0.65□□□□□ -2.31
SNCAP37840 RPS27P16-201ENST00000425758 201 ntBASIC0.65□□□□□ -2.31
SNCAP37840 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC0.65□□□□□ -2.31
SNCAP37840 THAP5P1-201ENST00000439089 262 ntBASIC0.65□□□□□ -2.31
SNCAP37840 AC104058.1-201ENST00000448028 297 ntBASIC0.65□□□□□ -2.31
SNCAP37840 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC0.65□□□□□ -2.31
SNCAP37840 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC0.65□□□□□ -2.31
SNCAP37840 SNORA48.9-201ENST00000516419 162 ntBASIC0.65□□□□□ -2.31
SNCAP37840 ZNF705CP-201ENST00000530515 889 ntBASIC0.65□□□□□ -2.31
SNCAP37840 AP005136.1-201ENST00000579765 429 ntBASIC0.65□□□□□ -2.31
SNCAP37840 FAM71BP1-201ENST00000604431 523 ntBASIC0.65□□□□□ -2.31
SNCAP37840 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
SNCAP37840 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.65□□□□□ -2.31
SNCAP37840 STMN1P1-201ENST00000617809 440 ntBASIC0.65□□□□□ -2.31
SNCAP37840 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
SNCAP37840 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC0.65□□□□□ -2.31
SNCAP37840 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC0.65□□□□□ -2.31
SNCAP37840 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC0.65□□□□□ -2.31
SNCAP37840 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC0.64□□□□□ -2.31
SNCAP37840 RNU1-124P-201ENST00000363861 145 ntBASIC0.64□□□□□ -2.31
SNCAP37840 MIR506-201ENST00000384998 124 ntBASIC0.64□□□□□ -2.31
SNCAP37840 MIR100-201ENST00000385259 80 ntBASIC0.64□□□□□ -2.31
SNCAP37840 RNA5SP100-201ENST00000410903 110 ntBASIC0.64□□□□□ -2.31
SNCAP37840 RNA5SP59-201ENST00000410922 110 ntBASIC0.64□□□□□ -2.31
SNCAP37840 NDUFS5P4-201ENST00000412983 318 ntBASIC0.64□□□□□ -2.31
SNCAP37840 MTCO2P20-201ENST00000437339 673 ntBASIC0.64□□□□□ -2.31
SNCAP37840 AL135790.2-201ENST00000437701 267 ntBASIC0.64□□□□□ -2.31
SNCAP37840 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC0.64□□□□□ -2.31
SNCAP37840 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC0.64□□□□□ -2.31
SNCAP37840 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC0.64□□□□□ -2.31
SNCAP37840 AC025465.3-201ENST00000510570 311 ntBASIC0.64□□□□□ -2.31
SNCAP37840 SNORA31.16-201ENST00000516773 139 ntBASIC0.64□□□□□ -2.31
SNCAP37840 5S_rRNA.3-201ENST00000517021 110 ntBASIC0.64□□□□□ -2.31
SNCAP37840 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC0.64□□□□□ -2.31
SNCAP37840 COPS8P3-201ENST00000526024 482 ntBASIC0.64□□□□□ -2.31
SNCAP37840 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC0.64□□□□□ -2.31
SNCAP37840 AC018618.2-201ENST00000604770 446 ntBASIC0.64□□□□□ -2.31
SNCAP37840 AC092953.2-201ENST00000608000 699 ntBASIC0.64□□□□□ -2.31
SNCAP37840 5S_rRNA.19-201ENST00000612131 110 ntBASIC0.64□□□□□ -2.31
SNCAP37840 USP12-203ENST00000620323 349 ntTSL 3 BASIC0.64□□□□□ -2.31
SNCAP37840 5S_rRNA.18-201ENST00000621941 110 ntBASIC0.64□□□□□ -2.31
SNCAP37840 AC090517.3-201ENST00000625170 141 ntBASIC0.64□□□□□ -2.31
SNCAP37840 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC0.64□□□□□ -2.31
SNCAP37840 AC008163.1-202ENST00000636004 2889 ntBASIC0.64□□□□□ -2.31
SNCAP37840 AL161781.1-201ENST00000354277 403 ntBASIC0.63□□□□□ -2.31
SNCAP37840 RNA5SP327-201ENST00000362494 101 ntBASIC0.63□□□□□ -2.31
SNCAP37840 RNU6-53P-201ENST00000365367 106 ntBASIC0.63□□□□□ -2.31
SNCAP37840 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC0.63□□□□□ -2.31
SNCAP37840 SNORA29-201ENST00000384183 140 ntBASIC0.63□□□□□ -2.31
SNCAP37840 RNU11-5P-201ENST00000391216 129 ntBASIC0.63□□□□□ -2.31
SNCAP37840 RNU2-33P-201ENST00000410344 192 ntBASIC0.63□□□□□ -2.31
SNCAP37840 AC006461.1-201ENST00000412637 326 ntBASIC0.63□□□□□ -2.31
SNCAP37840 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC0.63□□□□□ -2.31
SNCAP37840 RPL7P34-201ENST00000433316 712 ntBASIC0.63□□□□□ -2.31
SNCAP37840 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC0.63□□□□□ -2.31
SNCAP37840 AC244505.3-201ENST00000454598 187 ntBASIC0.63□□□□□ -2.31
SNCAP37840 AC006512.1-201ENST00000468816 291 ntBASIC0.63□□□□□ -2.31
SNCAP37840 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC0.63□□□□□ -2.31
SNCAP37840 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC0.63□□□□□ -2.31
SNCAP37840 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC0.63□□□□□ -2.31
SNCAP37840 SNORD116-28-201ENST00000516123 91 ntBASIC0.63□□□□□ -2.31
SNCAP37840 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.63□□□□□ -2.31
SNCAP37840 AP006587.4-201ENST00000526053 529 ntBASIC0.63□□□□□ -2.31
SNCAP37840 CENPUP1-201ENST00000526649 1202 ntBASIC0.63□□□□□ -2.31
SNCAP37840 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC0.63□□□□□ -2.31
SNCAP37840 AC124293.1-201ENST00000530034 493 ntBASIC0.63□□□□□ -2.31
SNCAP37840 AC093510.2-201ENST00000562820 896 ntBASIC0.63□□□□□ -2.31
SNCAP37840 MIR4653-201ENST00000585107 83 ntBASIC0.63□□□□□ -2.31
SNCAP37840 AL671309.1-201ENST00000603750 544 ntBASIC0.63□□□□□ -2.31
SNCAP37840 AL031176.1-201ENST00000604554 466 ntBASIC0.63□□□□□ -2.31
SNCAP37840 AC008945.2-201ENST00000606056 604 ntBASIC0.63□□□□□ -2.31
SNCAP37840 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC0.63□□□□□ -2.31
SNCAP37840 snoU13.31-201ENST00000607291 104 ntBASIC0.63□□□□□ -2.31
SNCAP37840 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
SNCAP37840 HAUS6P2-201ENST00000433254 2404 ntBASIC0.63□□□□□ -2.31
SNCAP37840 RNU1-36P-201ENST00000365130 165 ntBASIC0.62□□□□□ -2.31
SNCAP37840 RNU2-47P-201ENST00000410649 186 ntBASIC0.62□□□□□ -2.31
SNCAP37840 POLR2J4-204ENST00000418424 324 ntBASIC0.62□□□□□ -2.31
SNCAP37840 AL592045.1-201ENST00000429867 352 ntBASIC0.62□□□□□ -2.31
SNCAP37840 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC0.62□□□□□ -2.31
SNCAP37840 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC0.62□□□□□ -2.31
SNCAP37840 RPL31P3-201ENST00000458430 332 ntBASIC0.62□□□□□ -2.31
SNCAP37840 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC0.62□□□□□ -2.31
SNCAP37840 RPL22P13-201ENST00000493291 347 ntBASIC0.62□□□□□ -2.31
SNCAP37840 AC079140.2-201ENST00000506193 142 ntBASIC0.62□□□□□ -2.31
SNCAP37840 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC0.62□□□□□ -2.31
SNCAP37840 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC0.62□□□□□ -2.31
SNCAP37840 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
SNCAP37840 RNA5SP458-201ENST00000516188 119 ntBASIC0.62□□□□□ -2.31
SNCAP37840 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC0.62□□□□□ -2.31
SNCAP37840 CYB5AP5-201ENST00000549779 389 ntBASIC0.62□□□□□ -2.31
SNCAP37840 AL132857.1-201ENST00000555180 708 ntBASIC0.62□□□□□ -2.31
SNCAP37840 MIR4698-201ENST00000577795 80 ntBASIC0.62□□□□□ -2.31
SNCAP37840 AC005261.5-201ENST00000596280 355 ntBASIC0.62□□□□□ -2.31
SNCAP37840 BNIP3P23-201ENST00000599655 511 ntBASIC0.62□□□□□ -2.31
SNCAP37840 AC091152.3-201ENST00000604227 325 ntBASIC0.62□□□□□ -2.31
SNCAP37840 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC0.62□□□□□ -2.31
SNCAP37840 AC091965.5-201ENST00000624785 342 ntBASIC0.62□□□□□ -2.31
SNCAP37840 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC0.61□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms