Protein–RNA interactions for Protein: P31260

HOXA10, Homeobox protein Hox-A10, humanhuman

Predicted RBP Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA10P31260 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HOXA10P31260 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HOXA10P31260 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
HOXA10P31260 Y_RNA.81-201ENST00000362997 102 ntBASIC4.8□□□□□ -1.64
HOXA10P31260 Y_RNA.151-201ENST00000363566 112 ntBASIC4.8□□□□□ -1.64
HOXA10P31260 RNY3P11-201ENST00000364153 102 ntBASIC4.8□□□□□ -1.64
HOXA10P31260 RNU6-704P-201ENST00000364162 103 ntBASIC4.8□□□□□ -1.64
HOXA10P31260 SNORD50.2-201ENST00000365465 70 ntBASIC4.8□□□□□ -1.64
HOXA10P31260 RNU6-946P-201ENST00000383878 107 ntBASIC4.8□□□□□ -1.64
HOXA10P31260 RNY1P5-201ENST00000383890 115 ntBASIC4.8□□□□□ -1.64
HOXA10P31260 MIR625-201ENST00000385047 85 ntBASIC4.8□□□□□ -1.64
HOXA10P31260 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
HOXA10P31260 MIR1298-201ENST00000408783 112 ntBASIC4.8□□□□□ -1.64
HOXA10P31260 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC4.8□□□□□ -1.64
HOXA10P31260 AL591704.1-201ENST00000432574 275 ntBASIC4.8□□□□□ -1.64
HOXA10P31260 HSPD1P21-201ENST00000436541 245 ntBASIC4.8□□□□□ -1.64
HOXA10P31260 RPS3AP46-201ENST00000448352 682 ntBASIC4.8□□□□□ -1.64
HOXA10P31260 OR2AQ1P-201ENST00000451972 200 ntBASIC4.8□□□□□ -1.64
HOXA10P31260 RPS23P5-201ENST00000495419 428 ntBASIC4.8□□□□□ -1.64
HOXA10P31260 HMGB1P21-201ENST00000502313 581 ntBASIC4.8□□□□□ -1.64
HOXA10P31260 SNORA25.14-201ENST00000516481 132 ntBASIC4.8□□□□□ -1.64
HOXA10P31260 AC144568.1-201ENST00000520139 137 ntBASIC4.8□□□□□ -1.64
HOXA10P31260 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.8□□□□□ -1.64
HOXA10P31260 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.8□□□□□ -1.64
HOXA10P31260 RPL23AP84-201ENST00000571193 464 ntBASIC4.8□□□□□ -1.64
HOXA10P31260 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.8□□□□□ -1.64
HOXA10P31260 AC123786.2-201ENST00000603459 275 ntBASIC4.8□□□□□ -1.64
HOXA10P31260 DLEU2_2.2-201ENST00000615474 90 ntBASIC4.8□□□□□ -1.64
HOXA10P31260 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HOXA10P31260 AC092079.1-201ENST00000558620 1985 ntBASIC4.8□□□□□ -1.64
HOXA10P31260 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC4.8□□□□□ -1.64
HOXA10P31260 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HOXA10P31260 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
HOXA10P31260 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
HOXA10P31260 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HOXA10P31260 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC4.79□□□□□ -1.64
HOXA10P31260 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.79□□□□□ -1.64
HOXA10P31260 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HOXA10P31260 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HOXA10P31260 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
HOXA10P31260 AC008725.1-201ENST00000605123 2263 ntBASIC4.79□□□□□ -1.64
HOXA10P31260 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HOXA10P31260 Y_RNA.83-201ENST00000363005 113 ntBASIC4.79□□□□□ -1.64
HOXA10P31260 Y_RNA.122-201ENST00000363331 96 ntBASIC4.79□□□□□ -1.64
HOXA10P31260 RNA5SP72-201ENST00000364442 117 ntBASIC4.79□□□□□ -1.64
HOXA10P31260 RNU6-1078P-201ENST00000364522 103 ntBASIC4.79□□□□□ -1.64
HOXA10P31260 Y_RNA.269-201ENST00000364685 89 ntBASIC4.79□□□□□ -1.64
HOXA10P31260 Y_RNA.471-201ENST00000384312 102 ntBASIC4.79□□□□□ -1.64
HOXA10P31260 SNORA3C-201ENST00000408792 125 ntBASIC4.79□□□□□ -1.64
HOXA10P31260 RPL7AP73-201ENST00000413490 353 ntBASIC4.79□□□□□ -1.64
HOXA10P31260 RPS29P4-201ENST00000414733 161 ntBASIC4.79□□□□□ -1.64
HOXA10P31260 AL159987.2-201ENST00000432754 307 ntBASIC4.79□□□□□ -1.64
HOXA10P31260 AL353997.1-201ENST00000432936 108 ntBASIC4.79□□□□□ -1.64
HOXA10P31260 RPS17P13-201ENST00000448974 407 ntBASIC4.79□□□□□ -1.64
HOXA10P31260 NDUFS5P3-201ENST00000450668 321 ntBASIC4.79□□□□□ -1.64
HOXA10P31260 AL645939.1-201ENST00000453429 797 ntBASIC4.79□□□□□ -1.64
HOXA10P31260 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.79□□□□□ -1.64
HOXA10P31260 RPS29P26-201ENST00000477483 171 ntBASIC4.79□□□□□ -1.64
HOXA10P31260 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC4.79□□□□□ -1.64
HOXA10P31260 AC069499.1-201ENST00000489433 509 ntBASIC4.79□□□□□ -1.64
HOXA10P31260 COX7A2P2-201ENST00000505291 250 ntBASIC4.79□□□□□ -1.64
HOXA10P31260 AC104619.4-201ENST00000510773 249 ntBASIC4.79□□□□□ -1.64
HOXA10P31260 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.79□□□□□ -1.64
HOXA10P31260 SNORA74D-201ENST00000516404 141 ntBASIC4.79□□□□□ -1.64
HOXA10P31260 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC4.79□□□□□ -1.64
HOXA10P31260 U3.45-201ENST00000607547 219 ntBASIC4.79□□□□□ -1.64
HOXA10P31260 AC004832.4-201ENST00000608952 331 ntBASIC4.79□□□□□ -1.64
HOXA10P31260 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HOXA10P31260 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.79□□□□□ -1.64
HOXA10P31260 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
HOXA10P31260 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
HOXA10P31260 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HOXA10P31260 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.79□□□□□ -1.64
HOXA10P31260 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HOXA10P31260 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.78□□□□□ -1.64
HOXA10P31260 RNY1P16-201ENST00000363063 111 ntBASIC4.78□□□□□ -1.64
HOXA10P31260 RNA5SP51-201ENST00000364750 119 ntBASIC4.78□□□□□ -1.64
HOXA10P31260 RNU6-81P-201ENST00000365608 104 ntBASIC4.78□□□□□ -1.64
HOXA10P31260 SMIM11P1-201ENST00000369586 178 ntBASIC4.78□□□□□ -1.64
HOXA10P31260 MIR491-201ENST00000384877 84 ntBASIC4.78□□□□□ -1.64
HOXA10P31260 MRPL35P1-201ENST00000404272 572 ntBASIC4.78□□□□□ -1.64
HOXA10P31260 MIR1251-201ENST00000408552 70 ntBASIC4.78□□□□□ -1.64
HOXA10P31260 RNA5SP146-201ENST00000410743 123 ntBASIC4.78□□□□□ -1.64
HOXA10P31260 AC069218.2-201ENST00000411665 344 ntBASIC4.78□□□□□ -1.64
HOXA10P31260 RPS6P12-201ENST00000432491 726 ntBASIC4.78□□□□□ -1.64
HOXA10P31260 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HOXA10P31260 AC098869.1-201ENST00000481627 292 ntBASIC4.78□□□□□ -1.64
HOXA10P31260 AC135721.1-201ENST00000497954 479 ntBASIC4.78□□□□□ -1.64
HOXA10P31260 HMGN1P11-201ENST00000508668 303 ntBASIC4.78□□□□□ -1.64
HOXA10P31260 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC4.78□□□□□ -1.64
HOXA10P31260 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC4.78□□□□□ -1.64
HOXA10P31260 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC4.78□□□□□ -1.64
HOXA10P31260 MIR4504-201ENST00000577413 92 ntBASIC4.78□□□□□ -1.64
HOXA10P31260 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.78□□□□□ -1.64
HOXA10P31260 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC4.78□□□□□ -1.64
HOXA10P31260 AC244505.7-201ENST00000599675 272 ntBASIC4.78□□□□□ -1.64
HOXA10P31260 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC4.78□□□□□ -1.64
HOXA10P31260 AC002044.1-201ENST00000606707 158 ntBASIC4.78□□□□□ -1.64
HOXA10P31260 AL450472.1-202ENST00000637286 180 ntBASIC4.78□□□□□ -1.64
HOXA10P31260 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms