Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 AL513475.1-201ENST00000406602 315 ntBASIC1.32□□□□□ -2.2
COL4A5P29400 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.32□□□□□ -2.2
COL4A5P29400 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC1.32□□□□□ -2.2
COL4A5P29400 MTND4P6-201ENST00000438297 472 ntBASIC1.32□□□□□ -2.2
COL4A5P29400 IPO7P1-201ENST00000442031 636 ntBASIC1.32□□□□□ -2.2
COL4A5P29400 DDX3P2-201ENST00000446138 111 ntBASIC1.32□□□□□ -2.2
COL4A5P29400 RPL7P18-201ENST00000478965 734 ntBASIC1.32□□□□□ -2.2
COL4A5P29400 HMGB3P3-201ENST00000510526 400 ntBASIC1.32□□□□□ -2.2
COL4A5P29400 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC1.32□□□□□ -2.2
COL4A5P29400 RNU1-104P-201ENST00000517280 175 ntBASIC1.32□□□□□ -2.2
COL4A5P29400 AC105245.1-201ENST00000581934 244 ntBASIC1.32□□□□□ -2.2
COL4A5P29400 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC1.32□□□□□ -2.2
COL4A5P29400 OR1M4P-201ENST00000589199 287 ntBASIC1.32□□□□□ -2.2
COL4A5P29400 AC078899.2-201ENST00000595282 212 ntBASIC1.32□□□□□ -2.2
COL4A5P29400 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC1.32□□□□□ -2.2
COL4A5P29400 AC007349.4-201ENST00000608114 532 ntBASIC1.32□□□□□ -2.2
COL4A5P29400 AC097655.1-201ENST00000635075 318 ntBASIC1.32□□□□□ -2.2
COL4A5P29400 MIR7157-201ENST00000635801 60 ntBASIC1.32□□□□□ -2.2
COL4A5P29400 AC007785.2-201ENST00000598627 1916 ntBASIC1.32□□□□□ -2.2
COL4A5P29400 HMGB1P17-201ENST00000403495 628 ntBASIC1.31□□□□□ -2.2
COL4A5P29400 RNU2-40P-201ENST00000410833 196 ntBASIC1.31□□□□□ -2.2
COL4A5P29400 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC1.31□□□□□ -2.2
COL4A5P29400 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC1.31□□□□□ -2.2
COL4A5P29400 AC007742.1-201ENST00000425789 329 ntBASIC1.31□□□□□ -2.2
COL4A5P29400 AL512844.2-201ENST00000433990 593 ntBASIC1.31□□□□□ -2.2
COL4A5P29400 ELOCP26-201ENST00000436067 329 ntBASIC1.31□□□□□ -2.2
COL4A5P29400 AC092427.1-201ENST00000439177 601 ntBASIC1.31□□□□□ -2.2
COL4A5P29400 TPRKBP1-201ENST00000456243 481 ntBASIC1.31□□□□□ -2.2
COL4A5P29400 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC1.31□□□□□ -2.2
COL4A5P29400 AC078857.1-201ENST00000469870 667 ntBASIC1.31□□□□□ -2.2
COL4A5P29400 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC1.31□□□□□ -2.2
COL4A5P29400 AC118273.2-201ENST00000532092 465 ntBASIC1.31□□□□□ -2.2
COL4A5P29400 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
COL4A5P29400 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
COL4A5P29400 AL391261.3-201ENST00000557194 520 ntBASIC1.31□□□□□ -2.2
COL4A5P29400 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC1.31□□□□□ -2.2
COL4A5P29400 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC1.31□□□□□ -2.2
COL4A5P29400 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC1.31□□□□□ -2.2
COL4A5P29400 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.31□□□□□ -2.2
COL4A5P29400 AC090615.1-201ENST00000577519 154 ntBASIC1.31□□□□□ -2.2
COL4A5P29400 MIR1273G-201ENST00000577677 100 ntBASIC1.31□□□□□ -2.2
COL4A5P29400 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC1.31□□□□□ -2.2
COL4A5P29400 AC090897.2-201ENST00000581715 130 ntBASIC1.31□□□□□ -2.2
COL4A5P29400 AC107214.2-201ENST00000608204 634 ntBASIC1.31□□□□□ -2.2
COL4A5P29400 MTND1P37-201ENST00000636562 264 ntBASIC1.31□□□□□ -2.2
COL4A5P29400 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.3□□□□□ -2.2
COL4A5P29400 SNRPEP3-201ENST00000338402 276 ntBASIC1.3□□□□□ -2.2
COL4A5P29400 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
COL4A5P29400 RNU6-741P-201ENST00000383889 107 ntBASIC1.3□□□□□ -2.2
COL4A5P29400 MIR217-201ENST00000384817 110 ntBASIC1.3□□□□□ -2.2
COL4A5P29400 RNU6-750P-201ENST00000390946 107 ntBASIC1.3□□□□□ -2.2
COL4A5P29400 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.3□□□□□ -2.2
COL4A5P29400 ZNF863P-201ENST00000426746 417 ntBASIC1.3□□□□□ -2.2
COL4A5P29400 Z82210.1-201ENST00000440037 231 ntBASIC1.3□□□□□ -2.2
COL4A5P29400 AC002381.1-201ENST00000447049 280 ntBASIC1.3□□□□□ -2.2
COL4A5P29400 MTND1P9-201ENST00000453775 944 ntBASIC1.3□□□□□ -2.2
COL4A5P29400 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC1.3□□□□□ -2.2
COL4A5P29400 AC121161.1-201ENST00000510606 652 ntBASIC1.3□□□□□ -2.2
COL4A5P29400 RNA5SP330-201ENST00000517096 96 ntBASIC1.3□□□□□ -2.2
COL4A5P29400 AC022861.1-201ENST00000522981 663 ntBASIC1.3□□□□□ -2.2
COL4A5P29400 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
COL4A5P29400 MIR4295-201ENST00000585286 85 ntBASIC1.3□□□□□ -2.2
COL4A5P29400 AC090330.1-201ENST00000588646 764 ntBASIC1.3□□□□□ -2.2
COL4A5P29400 AP000403.1-201ENST00000603349 851 ntBASIC1.3□□□□□ -2.2
COL4A5P29400 AC123912.5-201ENST00000605470 343 ntBASIC1.3□□□□□ -2.2
COL4A5P29400 AC103810.8-201ENST00000607347 118 ntBASIC1.3□□□□□ -2.2
COL4A5P29400 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
COL4A5P29400 AL157770.1-201ENST00000623049 439 ntBASIC1.3□□□□□ -2.2
COL4A5P29400 AC068057.2-201ENST00000624047 895 ntBASIC1.3□□□□□ -2.2
COL4A5P29400 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC1.3□□□□□ -2.2
COL4A5P29400 RNU6-839P-201ENST00000363347 108 ntBASIC1.29□□□□□ -2.2
COL4A5P29400 RNA5SP465-201ENST00000391195 109 ntBASIC1.29□□□□□ -2.2
COL4A5P29400 MTND1P21-201ENST00000412991 285 ntBASIC1.29□□□□□ -2.2
COL4A5P29400 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC1.29□□□□□ -2.2
COL4A5P29400 EIF4EP4-201ENST00000424916 578 ntBASIC1.29□□□□□ -2.2
COL4A5P29400 MED14P1-201ENST00000430517 648 ntBASIC1.29□□□□□ -2.2
COL4A5P29400 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC1.29□□□□□ -2.2
COL4A5P29400 SDCBPP1-201ENST00000440192 890 ntBASIC1.29□□□□□ -2.2
COL4A5P29400 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.29□□□□□ -2.2
COL4A5P29400 AC027338.1-201ENST00000514840 825 ntBASIC1.29□□□□□ -2.2
COL4A5P29400 RNU6-1261P-201ENST00000517194 104 ntBASIC1.29□□□□□ -2.2
COL4A5P29400 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.29□□□□□ -2.2
COL4A5P29400 AC079148.1-201ENST00000565944 819 ntBASIC1.29□□□□□ -2.2
COL4A5P29400 LARP7P2-201ENST00000575306 125 ntBASIC1.29□□□□□ -2.2
COL4A5P29400 MIR4666A-201ENST00000580160 79 ntBASIC1.29□□□□□ -2.2
COL4A5P29400 AC022662.1-201ENST00000580252 331 ntBASIC1.29□□□□□ -2.2
COL4A5P29400 AL020996.3-201ENST00000606617 222 ntBASIC1.29□□□□□ -2.2
COL4A5P29400 AC013476.2-201ENST00000614456 459 ntBASIC1.29□□□□□ -2.2
COL4A5P29400 AC002550.2-201ENST00000621246 394 ntBASIC1.29□□□□□ -2.2
COL4A5P29400 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
COL4A5P29400 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.29□□□□□ -2.2
COL4A5P29400 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC1.29□□□□□ -2.2
COL4A5P29400 AC010889.1-201ENST00000566193 2666 ntBASIC1.29□□□□□ -2.2
COL4A5P29400 RNU6-223P-201ENST00000362830 107 ntBASIC1.29□□□□□ -2.2
COL4A5P29400 RNU6-234P-201ENST00000365229 104 ntBASIC1.29□□□□□ -2.2
COL4A5P29400 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC1.29□□□□□ -2.2
COL4A5P29400 AC019178.2-201ENST00000423595 505 ntBASIC1.29□□□□□ -2.2
COL4A5P29400 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC1.29□□□□□ -2.2
COL4A5P29400 DYNLL1P5-201ENST00000467158 270 ntBASIC1.29□□□□□ -2.2
COL4A5P29400 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC1.29□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms