Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC2.65□□□□□ -1.99
SHC1P29353 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.65□□□□□ -1.99
SHC1P29353 RPS29P2-201ENST00000479278 136 ntBASIC2.65□□□□□ -1.99
SHC1P29353 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
SHC1P29353 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.65□□□□□ -1.99
SHC1P29353 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC2.65□□□□□ -1.99
SHC1P29353 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.65□□□□□ -1.99
SHC1P29353 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.65□□□□□ -1.99
SHC1P29353 SNORD59.2-201ENST00000516873 68 ntBASIC2.65□□□□□ -1.99
SHC1P29353 ERHP1-201ENST00000523006 310 ntBASIC2.65□□□□□ -1.99
SHC1P29353 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.65□□□□□ -1.99
SHC1P29353 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC2.65□□□□□ -1.99
SHC1P29353 AC024619.4-201ENST00000580924 316 ntBASIC2.65□□□□□ -1.99
SHC1P29353 UBE2V2P2-201ENST00000587677 504 ntBASIC2.65□□□□□ -1.99
SHC1P29353 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC2.65□□□□□ -1.99
SHC1P29353 AC010525.2-201ENST00000590920 195 ntBASIC2.65□□□□□ -1.99
SHC1P29353 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.65□□□□□ -1.99
SHC1P29353 NRBF2P5-201ENST00000603087 788 ntBASIC2.65□□□□□ -1.99
SHC1P29353 C8orf59P2-201ENST00000603441 271 ntBASIC2.65□□□□□ -1.99
SHC1P29353 AL160281.1-201ENST00000605307 311 ntBASIC2.65□□□□□ -1.99
SHC1P29353 BNIP3P10-201ENST00000605360 577 ntBASIC2.65□□□□□ -1.99
SHC1P29353 TUG1_2.1-201ENST00000614234 87 ntBASIC2.65□□□□□ -1.99
SHC1P29353 Y_RNA.804-201ENST00000615262 101 ntBASIC2.65□□□□□ -1.99
SHC1P29353 AC063943.3-201ENST00000615562 356 ntBASIC2.65□□□□□ -1.99
SHC1P29353 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.65□□□□□ -1.99
SHC1P29353 AC022140.2-201ENST00000623500 188 ntBASIC2.65□□□□□ -1.99
SHC1P29353 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.65□□□□□ -1.99
SHC1P29353 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC2.65□□□□□ -1.99
SHC1P29353 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.65□□□□□ -1.99
SHC1P29353 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
SHC1P29353 AC073544.1-201ENST00000600110 1595 ntBASIC2.65□□□□□ -1.99
SHC1P29353 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.65□□□□□ -1.99
SHC1P29353 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
SHC1P29353 AL161431.1-201ENST00000618966 4205 ntBASIC2.64□□□□□ -1.99
SHC1P29353 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.64□□□□□ -1.99
SHC1P29353 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC2.64□□□□□ -1.99
SHC1P29353 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.64□□□□□ -1.99
SHC1P29353 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
SHC1P29353 RPL9P7-201ENST00000330965 580 ntBASIC2.64□□□□□ -1.99
SHC1P29353 RNU6-173P-201ENST00000364215 104 ntBASIC2.64□□□□□ -1.99
SHC1P29353 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
SHC1P29353 RNU6-332P-201ENST00000391193 108 ntBASIC2.64□□□□□ -1.99
SHC1P29353 AL136372.1-201ENST00000403060 228 ntBASIC2.64□□□□□ -1.99
SHC1P29353 AL590004.2-201ENST00000404787 371 ntBASIC2.64□□□□□ -1.99
SHC1P29353 SNORD88.1-201ENST00000408684 91 ntBASIC2.64□□□□□ -1.99
SHC1P29353 RNU2-39P-201ENST00000410604 198 ntBASIC2.64□□□□□ -1.99
SHC1P29353 RPL21P24-201ENST00000413752 448 ntBASIC2.64□□□□□ -1.99
SHC1P29353 AC091390.3-201ENST00000426478 338 ntBASIC2.64□□□□□ -1.99
SHC1P29353 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC2.64□□□□□ -1.99
SHC1P29353 AC022018.1-201ENST00000430685 241 ntBASIC2.64□□□□□ -1.99
SHC1P29353 MTND3P23-201ENST00000431980 347 ntBASIC2.64□□□□□ -1.99
SHC1P29353 RPL36AP53-201ENST00000432891 316 ntBASIC2.64□□□□□ -1.99
SHC1P29353 AC090774.1-201ENST00000435925 246 ntBASIC2.64□□□□□ -1.99
SHC1P29353 CALM1P1-201ENST00000442082 433 ntBASIC2.64□□□□□ -1.99
SHC1P29353 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC2.64□□□□□ -1.99
SHC1P29353 AL162389.1-201ENST00000449233 177 ntBASIC2.64□□□□□ -1.99
SHC1P29353 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC2.64□□□□□ -1.99
SHC1P29353 MRPS17P3-201ENST00000465453 385 ntBASIC2.64□□□□□ -1.99
SHC1P29353 AP000852.1-201ENST00000472460 573 ntBASIC2.64□□□□□ -1.99
SHC1P29353 AL163973.1-201ENST00000484753 577 ntBASIC2.64□□□□□ -1.99
SHC1P29353 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC2.64□□□□□ -1.99
SHC1P29353 EIF4EP3-201ENST00000498782 656 ntBASIC2.64□□□□□ -1.99
SHC1P29353 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.64□□□□□ -1.99
SHC1P29353 AC116562.3-201ENST00000506136 177 ntBASIC2.64□□□□□ -1.99
SHC1P29353 AC092436.1-201ENST00000506450 503 ntBASIC2.64□□□□□ -1.99
SHC1P29353 NAF1-205ENST00000509434 385 ntTSL 3 BASIC2.64□□□□□ -1.99
SHC1P29353 RNU7-51P-201ENST00000516560 62 ntBASIC2.64□□□□□ -1.99
SHC1P29353 RN7SKP219-201ENST00000516825 296 ntBASIC2.64□□□□□ -1.99
SHC1P29353 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.64□□□□□ -1.99
SHC1P29353 AC068587.5-201ENST00000528506 175 ntBASIC2.64□□□□□ -1.99
SHC1P29353 AP005435.4-201ENST00000529514 284 ntBASIC2.64□□□□□ -1.99
SHC1P29353 OR5BN1P-201ENST00000532955 829 ntBASIC2.64□□□□□ -1.99
SHC1P29353 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.64□□□□□ -1.99
SHC1P29353 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC2.64□□□□□ -1.99
SHC1P29353 H3F3AP1-201ENST00000559984 334 ntBASIC2.64□□□□□ -1.99
SHC1P29353 AL138976.2-201ENST00000563989 694 ntBASIC2.64□□□□□ -1.99
SHC1P29353 FGF7P1-201ENST00000582820 288 ntBASIC2.64□□□□□ -1.99
SHC1P29353 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.64□□□□□ -1.99
SHC1P29353 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC2.64□□□□□ -1.99
SHC1P29353 AL117336.2-201ENST00000602435 335 ntBASIC2.64□□□□□ -1.99
SHC1P29353 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.64□□□□□ -1.99
SHC1P29353 DISC2.1-201ENST00000612827 205 ntBASIC2.64□□□□□ -1.99
SHC1P29353 AC107871.2-201ENST00000612894 502 ntBASIC2.64□□□□□ -1.99
SHC1P29353 AC006111.3-201ENST00000622137 383 ntBASIC2.64□□□□□ -1.99
SHC1P29353 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC2.64□□□□□ -1.99
SHC1P29353 ATM-228ENST00000639240 498 ntTSL 5 BASIC2.64□□□□□ -1.99
SHC1P29353 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.64□□□□□ -1.99
SHC1P29353 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.64□□□□□ -1.99
SHC1P29353 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
SHC1P29353 AC000403.1-201ENST00000613696 3585 ntBASIC2.64□□□□□ -1.99
SHC1P29353 ASNSP3-201ENST00000451989 1306 ntBASIC2.64□□□□□ -1.99
SHC1P29353 API5P2-201ENST00000397055 1498 ntBASIC2.64□□□□□ -1.99
SHC1P29353 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
SHC1P29353 SNORA62.1-201ENST00000364287 154 ntBASIC2.63□□□□□ -1.99
SHC1P29353 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
SHC1P29353 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.63□□□□□ -1.99
SHC1P29353 RNU6-641P-201ENST00000384006 107 ntBASIC2.63□□□□□ -1.99
SHC1P29353 MIR454-201ENST00000390180 115 ntBASIC2.63□□□□□ -1.99
SHC1P29353 RNU1-101P-201ENST00000391171 127 ntBASIC2.63□□□□□ -1.99
SHC1P29353 MIR887-201ENST00000401258 79 ntBASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms