Protein–RNA interactions for Protein: P20585

MSH3, DNA mismatch repair protein Msh3, humanhuman

Predictions only

Length 1,137 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3P20585 DLEU1_1.1-201ENST00000618107 190 ntBASIC2.94□□□□□ -1.94
MSH3P20585 AC011155.2-201ENST00000623202 216 ntBASIC2.94□□□□□ -1.94
MSH3P20585 FER-210ENST00000628534 558 ntTSL 5 BASIC2.94□□□□□ -1.94
MSH3P20585 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC2.94□□□□□ -1.94
MSH3P20585 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC2.94□□□□□ -1.94
MSH3P20585 MAPK10-322ENST00000641485 4530 ntBASIC2.94□□□□□ -1.94
MSH3P20585 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
MSH3P20585 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
MSH3P20585 AC008568.2-201ENST00000623862 2313 ntBASIC2.93□□□□□ -1.94
MSH3P20585 AL139276.1-201ENST00000311910 1001 ntBASIC2.93□□□□□ -1.94
MSH3P20585 Y_RNA.295-201ENST00000364918 102 ntBASIC2.93□□□□□ -1.94
MSH3P20585 RNU6-996P-201ENST00000365438 107 ntBASIC2.93□□□□□ -1.94
MSH3P20585 Y_RNA.576-201ENST00000384781 102 ntBASIC2.93□□□□□ -1.94
MSH3P20585 RNU6-817P-201ENST00000391083 104 ntBASIC2.93□□□□□ -1.94
MSH3P20585 RPS4XP3-201ENST00000398541 413 ntBASIC2.93□□□□□ -1.94
MSH3P20585 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC2.93□□□□□ -1.94
MSH3P20585 Z85995.1-201ENST00000415547 335 ntBASIC2.93□□□□□ -1.94
MSH3P20585 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC2.93□□□□□ -1.94
MSH3P20585 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC2.93□□□□□ -1.94
MSH3P20585 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.93□□□□□ -1.94
MSH3P20585 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC2.93□□□□□ -1.94
MSH3P20585 GTF2IP20-201ENST00000431663 360 ntBASIC2.93□□□□□ -1.94
MSH3P20585 NDUFB4P6-201ENST00000436819 366 ntBASIC2.93□□□□□ -1.94
MSH3P20585 SEPT14P3-201ENST00000439401 183 ntBASIC2.93□□□□□ -1.94
MSH3P20585 CYCSP32-201ENST00000440548 321 ntBASIC2.93□□□□□ -1.94
MSH3P20585 AL732372.2-207ENST00000445840 183 ntBASIC2.93□□□□□ -1.94
MSH3P20585 AC073415.1-201ENST00000449240 153 ntBASIC2.93□□□□□ -1.94
MSH3P20585 SEPT14P2-201ENST00000453405 183 ntBASIC2.93□□□□□ -1.94
MSH3P20585 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.93□□□□□ -1.94
MSH3P20585 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC2.93□□□□□ -1.94
MSH3P20585 RPS29P2-201ENST00000479278 136 ntBASIC2.93□□□□□ -1.94
MSH3P20585 AC092436.1-201ENST00000506450 503 ntBASIC2.93□□□□□ -1.94
MSH3P20585 SEPT14P4-201ENST00000513445 186 ntBASIC2.93□□□□□ -1.94
MSH3P20585 SCGB1D5P-201ENST00000515134 247 ntBASIC2.93□□□□□ -1.94
MSH3P20585 RNU6-1256P-201ENST00000516539 103 ntBASIC2.93□□□□□ -1.94
MSH3P20585 RN7SKP219-201ENST00000516825 296 ntBASIC2.93□□□□□ -1.94
MSH3P20585 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC2.93□□□□□ -1.94
MSH3P20585 FO082796.1-201ENST00000523795 183 ntBASIC2.93□□□□□ -1.94
MSH3P20585 AP005435.4-201ENST00000529514 284 ntBASIC2.93□□□□□ -1.94
MSH3P20585 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC2.93□□□□□ -1.94
MSH3P20585 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
MSH3P20585 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
MSH3P20585 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.93□□□□□ -1.94
MSH3P20585 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC2.93□□□□□ -1.94
MSH3P20585 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.93□□□□□ -1.94
MSH3P20585 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC2.93□□□□□ -1.94
MSH3P20585 MIR3200-201ENST00000580767 85 ntBASIC2.93□□□□□ -1.94
MSH3P20585 AC008521.1-201ENST00000587471 187 ntBASIC2.93□□□□□ -1.94
MSH3P20585 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC2.93□□□□□ -1.94
MSH3P20585 AC013553.2-201ENST00000604244 589 ntBASIC2.93□□□□□ -1.94
MSH3P20585 MIR6076-201ENST00000617521 113 ntBASIC2.93□□□□□ -1.94
MSH3P20585 YWHAEP7-203ENST00000622054 312 ntBASIC2.93□□□□□ -1.94
MSH3P20585 AC006111.3-201ENST00000622137 383 ntBASIC2.93□□□□□ -1.94
MSH3P20585 AC090617.7-201ENST00000623952 126 ntBASIC2.93□□□□□ -1.94
MSH3P20585 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.93□□□□□ -1.94
MSH3P20585 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
MSH3P20585 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.93□□□□□ -1.94
MSH3P20585 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
MSH3P20585 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
MSH3P20585 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
MSH3P20585 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
MSH3P20585 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
MSH3P20585 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.92□□□□□ -1.94
MSH3P20585 RNY3P3-201ENST00000363816 102 ntBASIC2.92□□□□□ -1.94
MSH3P20585 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC2.92□□□□□ -1.94
MSH3P20585 RNU6-1029P-201ENST00000384109 107 ntBASIC2.92□□□□□ -1.94
MSH3P20585 MIR483-201ENST00000385070 76 ntBASIC2.92□□□□□ -1.94
MSH3P20585 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.92□□□□□ -1.94
MSH3P20585 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC2.92□□□□□ -1.94
MSH3P20585 USP9YP6-201ENST00000413550 854 ntBASIC2.92□□□□□ -1.94
MSH3P20585 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.92□□□□□ -1.94
MSH3P20585 AL109913.1-201ENST00000421173 514 ntBASIC2.92□□□□□ -1.94
MSH3P20585 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC2.92□□□□□ -1.94
MSH3P20585 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.92□□□□□ -1.94
MSH3P20585 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC2.92□□□□□ -1.94
MSH3P20585 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC2.92□□□□□ -1.94
MSH3P20585 CBWD4P-201ENST00000445695 655 ntBASIC2.92□□□□□ -1.94
MSH3P20585 AL590664.1-201ENST00000448065 339 ntBASIC2.92□□□□□ -1.94
MSH3P20585 MTND1P18-201ENST00000448191 573 ntBASIC2.92□□□□□ -1.94
MSH3P20585 NFU1P2-201ENST00000448700 469 ntBASIC2.92□□□□□ -1.94
MSH3P20585 AL118520.1-201ENST00000450770 291 ntBASIC2.92□□□□□ -1.94
MSH3P20585 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC2.92□□□□□ -1.94
MSH3P20585 AL162395.1-201ENST00000457882 422 ntBASIC2.92□□□□□ -1.94
MSH3P20585 RNU6-953P-201ENST00000459154 107 ntBASIC2.92□□□□□ -1.94
MSH3P20585 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC2.92□□□□□ -1.94
MSH3P20585 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.92□□□□□ -1.94
MSH3P20585 AP004217.1-201ENST00000480579 346 ntBASIC2.92□□□□□ -1.94
MSH3P20585 RPS29P25-201ENST00000481709 171 ntBASIC2.92□□□□□ -1.94
MSH3P20585 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC2.92□□□□□ -1.94
MSH3P20585 AC098591.2-201ENST00000510152 315 ntBASIC2.92□□□□□ -1.94
MSH3P20585 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC2.92□□□□□ -1.94
MSH3P20585 SNORA74D-201ENST00000516404 141 ntBASIC2.92□□□□□ -1.94
MSH3P20585 RNU6-685P-201ENST00000517088 95 ntBASIC2.92□□□□□ -1.94
MSH3P20585 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC2.92□□□□□ -1.94
MSH3P20585 AC007536.1-201ENST00000533382 349 ntBASIC2.92□□□□□ -1.94
MSH3P20585 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.92□□□□□ -1.94
MSH3P20585 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.92□□□□□ -1.94
MSH3P20585 AC234778.2-201ENST00000566241 354 ntBASIC2.92□□□□□ -1.94
MSH3P20585 AC068135.2-201ENST00000569293 1028 ntBASIC2.92□□□□□ -1.94
MSH3P20585 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms