Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.19□□□□□ -1.9
TNFRSF1BP20333 AC244517.12-201ENST00000623581 663 ntBASIC3.19□□□□□ -1.9
TNFRSF1BP20333 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.19□□□□□ -1.9
TNFRSF1BP20333 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.19□□□□□ -1.9
TNFRSF1BP20333 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
TNFRSF1BP20333 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
TNFRSF1BP20333 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
TNFRSF1BP20333 AC032011.1-201ENST00000611703 1549 ntBASIC3.19□□□□□ -1.9
TNFRSF1BP20333 RNA5SP197-201ENST00000363357 119 ntBASIC3.18□□□□□ -1.9
TNFRSF1BP20333 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
TNFRSF1BP20333 Y_RNA.480-201ENST00000384364 102 ntBASIC3.18□□□□□ -1.9
TNFRSF1BP20333 AL445189.1-201ENST00000405722 338 ntBASIC3.18□□□□□ -1.9
TNFRSF1BP20333 RPS12P24-201ENST00000412619 387 ntBASIC3.18□□□□□ -1.9
TNFRSF1BP20333 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC3.18□□□□□ -1.9
TNFRSF1BP20333 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC3.18□□□□□ -1.9
TNFRSF1BP20333 AL035423.1-201ENST00000420331 213 ntBASIC3.18□□□□□ -1.9
TNFRSF1BP20333 AC244098.2-201ENST00000422068 99 ntBASIC3.18□□□□□ -1.9
TNFRSF1BP20333 RPL31P12-201ENST00000422587 358 ntBASIC3.18□□□□□ -1.9
TNFRSF1BP20333 MTCO1P39-201ENST00000426148 480 ntBASIC3.18□□□□□ -1.9
TNFRSF1BP20333 AC004975.1-201ENST00000428733 208 ntBASIC3.18□□□□□ -1.9
TNFRSF1BP20333 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.18□□□□□ -1.9
TNFRSF1BP20333 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.18□□□□□ -1.9
TNFRSF1BP20333 TPT1P12-201ENST00000448968 492 ntBASIC3.18□□□□□ -1.9
TNFRSF1BP20333 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.18□□□□□ -1.9
TNFRSF1BP20333 NUTF2P7-201ENST00000453086 375 ntBASIC3.18□□□□□ -1.9
TNFRSF1BP20333 AC006539.3-201ENST00000454258 129 ntBASIC3.18□□□□□ -1.9
TNFRSF1BP20333 AC021205.2-201ENST00000480069 347 ntBASIC3.18□□□□□ -1.9
TNFRSF1BP20333 AC026801.1-201ENST00000497178 464 ntBASIC3.18□□□□□ -1.9
TNFRSF1BP20333 MLLT10P2-201ENST00000506434 249 ntBASIC3.18□□□□□ -1.9
TNFRSF1BP20333 RNU6-1046P-201ENST00000516538 107 ntBASIC3.18□□□□□ -1.9
TNFRSF1BP20333 RNU6-1016P-201ENST00000516689 94 ntBASIC3.18□□□□□ -1.9
TNFRSF1BP20333 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.18□□□□□ -1.9
TNFRSF1BP20333 AC022634.1-201ENST00000520765 532 ntBASIC3.18□□□□□ -1.9
TNFRSF1BP20333 RNU6-323P-201ENST00000521915 107 ntBASIC3.18□□□□□ -1.9
TNFRSF1BP20333 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.18□□□□□ -1.9
TNFRSF1BP20333 AC005951.2-201ENST00000576282 495 ntBASIC3.18□□□□□ -1.9
TNFRSF1BP20333 MIR5692A1-201ENST00000580523 69 ntBASIC3.18□□□□□ -1.9
TNFRSF1BP20333 ATP5A1P2-202ENST00000616464 443 ntBASIC3.18□□□□□ -1.9
TNFRSF1BP20333 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.18□□□□□ -1.9
TNFRSF1BP20333 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.18□□□□□ -1.9
TNFRSF1BP20333 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
TNFRSF1BP20333 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
TNFRSF1BP20333 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.18□□□□□ -1.9
TNFRSF1BP20333 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
TNFRSF1BP20333 AC058791.1-201ENST00000608412 3198 ntBASIC3.18□□□□□ -1.9
TNFRSF1BP20333 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
TNFRSF1BP20333 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
TNFRSF1BP20333 AL353746.1-201ENST00000566293 6881 ntBASIC3.17□□□□□ -1.9
TNFRSF1BP20333 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.17□□□□□ -1.9
TNFRSF1BP20333 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
TNFRSF1BP20333 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
TNFRSF1BP20333 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
TNFRSF1BP20333 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.17□□□□□ -1.9
TNFRSF1BP20333 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
TNFRSF1BP20333 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
TNFRSF1BP20333 RNU5A-1-201ENST00000362698 116 ntBASIC3.17□□□□□ -1.9
TNFRSF1BP20333 Y_RNA.145-201ENST00000363527 102 ntBASIC3.17□□□□□ -1.9
TNFRSF1BP20333 SNORA70.2-201ENST00000364506 135 ntBASIC3.17□□□□□ -1.9
TNFRSF1BP20333 RNU6-335P-201ENST00000364563 113 ntBASIC3.17□□□□□ -1.9
TNFRSF1BP20333 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.17□□□□□ -1.9
TNFRSF1BP20333 RNU6-784P-201ENST00000384330 106 ntBASIC3.17□□□□□ -1.9
TNFRSF1BP20333 RNU6-45P-201ENST00000384471 107 ntBASIC3.17□□□□□ -1.9
TNFRSF1BP20333 RN7SKP58-201ENST00000411010 305 ntBASIC3.17□□□□□ -1.9
TNFRSF1BP20333 RNA5SP31-201ENST00000411144 127 ntBASIC3.17□□□□□ -1.9
TNFRSF1BP20333 RNU6-1304P-201ENST00000411374 106 ntBASIC3.17□□□□□ -1.9
TNFRSF1BP20333 AL513331.1-201ENST00000411908 397 ntBASIC3.17□□□□□ -1.9
TNFRSF1BP20333 ATP5A1P2-201ENST00000412323 255 ntBASIC3.17□□□□□ -1.9
TNFRSF1BP20333 AC126124.2-201ENST00000413542 321 ntBASIC3.17□□□□□ -1.9
TNFRSF1BP20333 AC245054.2-201ENST00000415639 319 ntBASIC3.17□□□□□ -1.9
TNFRSF1BP20333 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.17□□□□□ -1.9
TNFRSF1BP20333 RPL30P15-201ENST00000457129 321 ntBASIC3.17□□□□□ -1.9
TNFRSF1BP20333 HMGN1P18-201ENST00000457642 277 ntBASIC3.17□□□□□ -1.9
TNFRSF1BP20333 U3.44-201ENST00000458938 192 ntBASIC3.17□□□□□ -1.9
TNFRSF1BP20333 AC117503.1-201ENST00000472241 394 ntBASIC3.17□□□□□ -1.9
TNFRSF1BP20333 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.17□□□□□ -1.9
TNFRSF1BP20333 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC3.17□□□□□ -1.9
TNFRSF1BP20333 AC002456.2-201ENST00000509356 380 ntBASIC3.17□□□□□ -1.9
TNFRSF1BP20333 AC116337.1-201ENST00000509680 687 ntBASIC3.17□□□□□ -1.9
TNFRSF1BP20333 RNU6-927P-201ENST00000516199 100 ntBASIC3.17□□□□□ -1.9
TNFRSF1BP20333 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.17□□□□□ -1.9
TNFRSF1BP20333 RNU6-264P-201ENST00000517134 104 ntBASIC3.17□□□□□ -1.9
TNFRSF1BP20333 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC3.17□□□□□ -1.9
TNFRSF1BP20333 AC087854.1-201ENST00000519706 414 ntBASIC3.17□□□□□ -1.9
TNFRSF1BP20333 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.17□□□□□ -1.9
TNFRSF1BP20333 PARP1P2-201ENST00000556806 195 ntBASIC3.17□□□□□ -1.9
TNFRSF1BP20333 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.17□□□□□ -1.9
TNFRSF1BP20333 MIR5047-201ENST00000579212 100 ntBASIC3.17□□□□□ -1.9
TNFRSF1BP20333 AC136443.5-201ENST00000603741 370 ntBASIC3.17□□□□□ -1.9
TNFRSF1BP20333 AC016925.2-201ENST00000605108 242 ntBASIC3.17□□□□□ -1.9
TNFRSF1BP20333 MIR15A-201ENST00000607334 83 ntBASIC3.17□□□□□ -1.9
TNFRSF1BP20333 AL442067.1-201ENST00000613261 223 ntBASIC3.17□□□□□ -1.9
TNFRSF1BP20333 AC034102.8-201ENST00000615146 484 ntBASIC3.17□□□□□ -1.9
TNFRSF1BP20333 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
TNFRSF1BP20333 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
TNFRSF1BP20333 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.17□□□□□ -1.9
TNFRSF1BP20333 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
TNFRSF1BP20333 MTND5P19-201ENST00000424872 1794 ntBASIC3.17□□□□□ -1.9
TNFRSF1BP20333 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.17□□□□□ -1.9
TNFRSF1BP20333 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
TNFRSF1BP20333 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 160.7 ms