Protein–RNA interactions for Protein: P13612

ITGA4, Integrin alpha-4, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4P13612 AC006946.1-201ENST00000429106 328 ntBASIC4.33□□□□□ -1.72
ITGA4P13612 AC099799.1-201ENST00000439809 192 ntBASIC4.33□□□□□ -1.72
ITGA4P13612 DAP3P1-201ENST00000441522 278 ntBASIC4.33□□□□□ -1.72
ITGA4P13612 FABP5P15-201ENST00000453566 214 ntBASIC4.33□□□□□ -1.72
ITGA4P13612 HMGN1P11-201ENST00000508668 303 ntBASIC4.33□□□□□ -1.72
ITGA4P13612 SNORA67.7-201ENST00000516664 135 ntBASIC4.33□□□□□ -1.72
ITGA4P13612 AC004024.1-201ENST00000549244 247 ntBASIC4.33□□□□□ -1.72
ITGA4P13612 TRAV32-201ENST00000553993 340 ntBASIC4.33□□□□□ -1.72
ITGA4P13612 MIR3158-1-201ENST00000583596 81 ntBASIC4.33□□□□□ -1.72
ITGA4P13612 VN1R107P-201ENST00000601784 209 ntBASIC4.33□□□□□ -1.72
ITGA4P13612 AL121917.1-203ENST00000605534 577 ntBASIC4.33□□□□□ -1.72
ITGA4P13612 AL591516.1-201ENST00000611326 274 ntBASIC4.33□□□□□ -1.72
ITGA4P13612 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.33□□□□□ -1.72
ITGA4P13612 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC4.33□□□□□ -1.72
ITGA4P13612 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
ITGA4P13612 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.33□□□□□ -1.72
ITGA4P13612 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
ITGA4P13612 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
ITGA4P13612 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
ITGA4P13612 AC091812.1-201ENST00000432235 1948 ntBASIC4.33□□□□□ -1.72
ITGA4P13612 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.32□□□□□ -1.72
ITGA4P13612 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
ITGA4P13612 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.32□□□□□ -1.72
ITGA4P13612 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
ITGA4P13612 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
ITGA4P13612 Y_RNA.176-201ENST00000363815 109 ntBASIC4.32□□□□□ -1.72
ITGA4P13612 RNU6-450P-201ENST00000364654 107 ntBASIC4.32□□□□□ -1.72
ITGA4P13612 RNU6-384P-201ENST00000364900 104 ntBASIC4.32□□□□□ -1.72
ITGA4P13612 Y_RNA.389-201ENST00000383924 113 ntBASIC4.32□□□□□ -1.72
ITGA4P13612 RNU6-174P-201ENST00000410406 106 ntBASIC4.32□□□□□ -1.72
ITGA4P13612 RNU2-23P-201ENST00000410545 195 ntBASIC4.32□□□□□ -1.72
ITGA4P13612 AL592148.1-201ENST00000413568 445 ntBASIC4.32□□□□□ -1.72
ITGA4P13612 CYP4F29P-201ENST00000420685 446 ntBASIC4.32□□□□□ -1.72
ITGA4P13612 DPH3P2-201ENST00000422618 250 ntBASIC4.32□□□□□ -1.72
ITGA4P13612 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC4.32□□□□□ -1.72
ITGA4P13612 NDUFB4P7-201ENST00000423198 363 ntBASIC4.32□□□□□ -1.72
ITGA4P13612 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC4.32□□□□□ -1.72
ITGA4P13612 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
ITGA4P13612 AC007919.1-201ENST00000429380 217 ntBASIC4.32□□□□□ -1.72
ITGA4P13612 MYL8P-204ENST00000431574 518 ntBASIC4.32□□□□□ -1.72
ITGA4P13612 AL353997.1-201ENST00000432936 108 ntBASIC4.32□□□□□ -1.72
ITGA4P13612 AL731563.1-201ENST00000442202 214 ntBASIC4.32□□□□□ -1.72
ITGA4P13612 HMGN2P21-201ENST00000447764 270 ntBASIC4.32□□□□□ -1.72
ITGA4P13612 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
ITGA4P13612 snoU13.4-201ENST00000458916 104 ntBASIC4.32□□□□□ -1.72
ITGA4P13612 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.32□□□□□ -1.72
ITGA4P13612 PPIAP15-201ENST00000479662 484 ntBASIC4.32□□□□□ -1.72
ITGA4P13612 AC105758.1-201ENST00000506038 399 ntBASIC4.32□□□□□ -1.72
ITGA4P13612 RNU4-77P-201ENST00000516692 156 ntBASIC4.32□□□□□ -1.72
ITGA4P13612 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC4.32□□□□□ -1.72
ITGA4P13612 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.32□□□□□ -1.72
ITGA4P13612 AC110588.1-201ENST00000559699 137 ntBASIC4.32□□□□□ -1.72
ITGA4P13612 SUB1P3-201ENST00000564581 315 ntBASIC4.32□□□□□ -1.72
ITGA4P13612 MIR4429-201ENST00000580105 73 ntBASIC4.32□□□□□ -1.72
ITGA4P13612 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC4.32□□□□□ -1.72
ITGA4P13612 SNORD58B-201ENST00000607313 66 ntBASIC4.32□□□□□ -1.72
ITGA4P13612 AL355810.1-201ENST00000614629 552 ntBASIC4.32□□□□□ -1.72
ITGA4P13612 U4.1-201ENST00000620349 87 ntBASIC4.32□□□□□ -1.72
ITGA4P13612 BMS1P21-201ENST00000634565 365 ntBASIC4.32□□□□□ -1.72
ITGA4P13612 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
ITGA4P13612 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.32□□□□□ -1.72
ITGA4P13612 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
ITGA4P13612 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
ITGA4P13612 Y_RNA.48-201ENST00000362710 103 ntBASIC4.31□□□□□ -1.72
ITGA4P13612 Y_RNA.245-201ENST00000364493 95 ntBASIC4.31□□□□□ -1.72
ITGA4P13612 RNA5SP97-201ENST00000365006 84 ntBASIC4.31□□□□□ -1.72
ITGA4P13612 RNU6-596P-201ENST00000365395 98 ntBASIC4.31□□□□□ -1.72
ITGA4P13612 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
ITGA4P13612 MIR30B-201ENST00000384850 88 ntBASIC4.31□□□□□ -1.72
ITGA4P13612 PTMAP2-201ENST00000397627 327 ntBASIC4.31□□□□□ -1.72
ITGA4P13612 AL445584.1-201ENST00000431451 330 ntBASIC4.31□□□□□ -1.72
ITGA4P13612 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC4.31□□□□□ -1.72
ITGA4P13612 RN7SL271P-201ENST00000487601 295 ntBASIC4.31□□□□□ -1.72
ITGA4P13612 AL160314.1-201ENST00000490836 438 ntBASIC4.31□□□□□ -1.72
ITGA4P13612 RN7SL323P-201ENST00000494712 295 ntBASIC4.31□□□□□ -1.72
ITGA4P13612 AC110794.1-201ENST00000505816 425 ntBASIC4.31□□□□□ -1.72
ITGA4P13612 RNU6-635P-201ENST00000516651 102 ntBASIC4.31□□□□□ -1.72
ITGA4P13612 RNA5SP290-201ENST00000517133 127 ntBASIC4.31□□□□□ -1.72
ITGA4P13612 AP002404.1-201ENST00000532005 451 ntBASIC4.31□□□□□ -1.72
ITGA4P13612 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC4.31□□□□□ -1.72
ITGA4P13612 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.31□□□□□ -1.72
ITGA4P13612 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.31□□□□□ -1.72
ITGA4P13612 MIR92B-201ENST00000607575 96 ntBASIC4.31□□□□□ -1.72
ITGA4P13612 AP002826.1-201ENST00000608835 315 ntBASIC4.31□□□□□ -1.72
ITGA4P13612 AC090132.2-201ENST00000615881 347 ntBASIC4.31□□□□□ -1.72
ITGA4P13612 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC4.31□□□□□ -1.72
ITGA4P13612 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.31□□□□□ -1.72
ITGA4P13612 FP236240.3-201ENST00000623061 327 ntBASIC4.31□□□□□ -1.72
ITGA4P13612 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
ITGA4P13612 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
ITGA4P13612 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
ITGA4P13612 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
ITGA4P13612 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.31□□□□□ -1.72
ITGA4P13612 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
ITGA4P13612 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.31□□□□□ -1.72
ITGA4P13612 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.3□□□□□ -1.72
ITGA4P13612 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
ITGA4P13612 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
ITGA4P13612 MIR412-201ENST00000362142 91 ntBASIC4.3□□□□□ -1.72
ITGA4P13612 Y_RNA.39-201ENST00000362620 98 ntBASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms