Protein–RNA interactions for Protein: P12270

TPR, Nucleoprotein TPR, humanhuman

Known RBP Predictions only

Length 2,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPRP12270 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC0.67□□□□□ -2.3
TPRP12270 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.67□□□□□ -2.3
TPRP12270 AL161629.2-201ENST00000615347 275 ntBASIC0.67□□□□□ -2.3
TPRP12270 AC068880.5-201ENST00000624331 290 ntBASIC0.67□□□□□ -2.3
TPRP12270 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC0.67□□□□□ -2.3
TPRP12270 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC0.66□□□□□ -2.3
TPRP12270 RNU6-444P-201ENST00000383988 108 ntBASIC0.66□□□□□ -2.3
TPRP12270 SNORD26-201ENST00000384147 75 ntBASIC0.66□□□□□ -2.3
TPRP12270 RNU6-452P-201ENST00000384406 107 ntBASIC0.66□□□□□ -2.3
TPRP12270 DSTNP4-201ENST00000399472 474 ntBASIC0.66□□□□□ -2.3
TPRP12270 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC0.66□□□□□ -2.3
TPRP12270 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC0.66□□□□□ -2.3
TPRP12270 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC0.66□□□□□ -2.3
TPRP12270 AC093770.1-201ENST00000511559 571 ntBASIC0.66□□□□□ -2.3
TPRP12270 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC0.66□□□□□ -2.3
TPRP12270 SNORA70.16-201ENST00000516390 95 ntBASIC0.66□□□□□ -2.3
TPRP12270 SNORA31.25-201ENST00000517242 134 ntBASIC0.66□□□□□ -2.3
TPRP12270 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC0.66□□□□□ -2.3
TPRP12270 C1DP5-201ENST00000525775 383 ntBASIC0.66□□□□□ -2.3
TPRP12270 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.66□□□□□ -2.3
TPRP12270 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC0.66□□□□□ -2.3
TPRP12270 AP001330.4-201ENST00000604350 154 ntBASIC0.66□□□□□ -2.3
TPRP12270 AC004775.1-201ENST00000607389 753 ntBASIC0.66□□□□□ -2.3
TPRP12270 AC006213.4-201ENST00000616184 634 ntBASIC0.66□□□□□ -2.3
TPRP12270 MTND5P11-201ENST00000511037 1812 ntBASIC0.66□□□□□ -2.3
TPRP12270 CBX3P1-201ENST00000325243 554 ntBASIC0.65□□□□□ -2.3
TPRP12270 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC0.65□□□□□ -2.3
TPRP12270 RNU6-1226P-201ENST00000384317 107 ntBASIC0.65□□□□□ -2.3
TPRP12270 AC068050.1-201ENST00000394891 380 ntBASIC0.65□□□□□ -2.3
TPRP12270 RNU6-920P-201ENST00000410926 92 ntBASIC0.65□□□□□ -2.3
TPRP12270 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC0.65□□□□□ -2.3
TPRP12270 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC0.65□□□□□ -2.3
TPRP12270 KLF3P2-201ENST00000465138 268 ntBASIC0.65□□□□□ -2.3
TPRP12270 IGLVI-20-201ENST00000519296 130 ntBASIC0.65□□□□□ -2.3
TPRP12270 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC0.65□□□□□ -2.3
TPRP12270 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC0.65□□□□□ -2.3
TPRP12270 AC027104.1-201ENST00000563702 681 ntBASIC0.65□□□□□ -2.3
TPRP12270 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC0.65□□□□□ -2.3
TPRP12270 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC0.65□□□□□ -2.3
TPRP12270 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC0.65□□□□□ -2.3
TPRP12270 AC021851.1-201ENST00000608537 1082 ntBASIC0.65□□□□□ -2.3
TPRP12270 AC009974.1-201ENST00000608881 455 ntBASIC0.65□□□□□ -2.3
TPRP12270 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC0.65□□□□□ -2.3
TPRP12270 AP000776.1-201ENST00000530032 1663 ntBASIC0.65□□□□□ -2.3
TPRP12270 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC0.65□□□□□ -2.3
TPRP12270 RNU6-39P-201ENST00000384344 107 ntBASIC0.65□□□□□ -2.31
TPRP12270 MIR1468-201ENST00000410600 86 ntBASIC0.65□□□□□ -2.31
TPRP12270 TRIM60P5Y-201ENST00000413946 574 ntBASIC0.65□□□□□ -2.31
TPRP12270 AL035410.1-201ENST00000427409 427 ntBASIC0.65□□□□□ -2.31
TPRP12270 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC0.65□□□□□ -2.31
TPRP12270 TAAR7P-201ENST00000436141 242 ntBASIC0.65□□□□□ -2.31
TPRP12270 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC0.65□□□□□ -2.31
TPRP12270 SUMO2P2-201ENST00000456482 255 ntBASIC0.65□□□□□ -2.31
TPRP12270 VPS26AP1-201ENST00000483197 979 ntBASIC0.65□□□□□ -2.31
TPRP12270 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
TPRP12270 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
TPRP12270 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC0.65□□□□□ -2.31
TPRP12270 HMGB1P51-201ENST00000605166 638 ntBASIC0.65□□□□□ -2.31
TPRP12270 AC240442.1-201ENST00000616055 283 ntBASIC0.65□□□□□ -2.31
TPRP12270 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC0.64□□□□□ -2.31
TPRP12270 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC0.64□□□□□ -2.31
TPRP12270 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC0.64□□□□□ -2.31
TPRP12270 SNRPGP12-201ENST00000449481 213 ntBASIC0.64□□□□□ -2.31
TPRP12270 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC0.64□□□□□ -2.31
TPRP12270 CBX3P3-201ENST00000508108 532 ntBASIC0.64□□□□□ -2.31
TPRP12270 RNU6-798P-201ENST00000516912 103 ntBASIC0.64□□□□□ -2.31
TPRP12270 AC087481.2-201ENST00000565492 330 ntBASIC0.64□□□□□ -2.31
TPRP12270 AC068620.3-201ENST00000602749 560 ntBASIC0.64□□□□□ -2.31
TPRP12270 XIAPP1-201ENST00000603162 600 ntBASIC0.64□□□□□ -2.31
TPRP12270 AL450336.1-201ENST00000605180 586 ntBASIC0.64□□□□□ -2.31
TPRP12270 MIR6718-201ENST00000616153 80 ntBASIC0.64□□□□□ -2.31
TPRP12270 AC068787.1-201ENST00000623908 691 ntBASIC0.64□□□□□ -2.31
TPRP12270 AL109659.3-201ENST00000624985 950 ntBASIC0.64□□□□□ -2.31
TPRP12270 AL356473.1-201ENST00000406203 1408 ntBASIC0.64□□□□□ -2.31
TPRP12270 AC007785.2-201ENST00000598627 1916 ntBASIC0.64□□□□□ -2.31
TPRP12270 RNU6-1083P-201ENST00000384022 107 ntBASIC0.64□□□□□ -2.31
TPRP12270 Y_RNA.457-201ENST00000384237 111 ntBASIC0.64□□□□□ -2.31
TPRP12270 U3.29-201ENST00000391296 212 ntBASIC0.64□□□□□ -2.31
TPRP12270 RPS3AP24-201ENST00000407896 734 ntBASIC0.64□□□□□ -2.31
TPRP12270 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC0.64□□□□□ -2.31
TPRP12270 AL359385.1-201ENST00000456509 365 ntBASIC0.64□□□□□ -2.31
TPRP12270 RPS20P24-201ENST00000457473 361 ntBASIC0.64□□□□□ -2.31
TPRP12270 RNU6-420P-201ENST00000458780 107 ntBASIC0.64□□□□□ -2.31
TPRP12270 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC0.64□□□□□ -2.31
TPRP12270 AC078899.2-201ENST00000595282 212 ntBASIC0.64□□□□□ -2.31
TPRP12270 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC0.64□□□□□ -2.31
TPRP12270 AL137246.1-201ENST00000607072 977 ntBASIC0.64□□□□□ -2.31
TPRP12270 AC079395.3-201ENST00000615161 484 ntBASIC0.64□□□□□ -2.31
TPRP12270 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC0.64□□□□□ -2.31
TPRP12270 AC095031.1-201ENST00000623685 672 ntBASIC0.64□□□□□ -2.31
TPRP12270 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC0.64□□□□□ -2.31
TPRP12270 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC0.64□□□□□ -2.31
TPRP12270 RNU6-1249P-201ENST00000363237 111 ntBASIC0.63□□□□□ -2.31
TPRP12270 RNA5SP299-201ENST00000391203 116 ntBASIC0.63□□□□□ -2.31
TPRP12270 MICF-203ENST00000432679 129 ntBASIC0.63□□□□□ -2.31
TPRP12270 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC0.63□□□□□ -2.31
TPRP12270 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC0.63□□□□□ -2.31
TPRP12270 AC015908.1-201ENST00000478739 476 ntBASIC0.63□□□□□ -2.31
TPRP12270 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC0.63□□□□□ -2.31
TPRP12270 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms