Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.38□□□□□ -2.35
TOP2AP11388 AC025588.2-201ENST00000604851 466 ntBASIC0.38□□□□□ -2.35
TOP2AP11388 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC0.38□□□□□ -2.35
TOP2AP11388 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC0.38□□□□□ -2.35
TOP2AP11388 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC0.38□□□□□ -2.35
TOP2AP11388 Y_RNA.471-201ENST00000384312 102 ntBASIC0.37□□□□□ -2.35
TOP2AP11388 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC0.37□□□□□ -2.35
TOP2AP11388 AC093106.2-201ENST00000428212 385 ntBASIC0.37□□□□□ -2.35
TOP2AP11388 CR769776.1-201ENST00000441254 787 ntBASIC0.37□□□□□ -2.35
TOP2AP11388 Z82190.1-201ENST00000454534 490 ntBASIC0.37□□□□□ -2.35
TOP2AP11388 AC087477.1-201ENST00000465747 340 ntBASIC0.37□□□□□ -2.35
TOP2AP11388 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC0.37□□□□□ -2.35
TOP2AP11388 BNIP3P16-201ENST00000589779 534 ntBASIC0.37□□□□□ -2.35
TOP2AP11388 AC095031.1-201ENST00000623685 672 ntBASIC0.37□□□□□ -2.35
TOP2AP11388 AP003400.5-201ENST00000624827 617 ntBASIC0.37□□□□□ -2.35
TOP2AP11388 AC134026.1-201ENST00000623249 2239 ntBASIC0.36□□□□□ -2.35
TOP2AP11388 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC0.36□□□□□ -2.35
TOP2AP11388 MIR329-2-201ENST00000385029 84 ntBASIC0.36□□□□□ -2.35
TOP2AP11388 RNU6-220P-201ENST00000390919 107 ntBASIC0.36□□□□□ -2.35
TOP2AP11388 AL354941.1-201ENST00000438600 464 ntBASIC0.36□□□□□ -2.35
TOP2AP11388 MIR5190-201ENST00000581537 80 ntBASIC0.36□□□□□ -2.35
TOP2AP11388 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC0.36□□□□□ -2.35
TOP2AP11388 MIR1912-201ENST00000410389 80 ntBASIC0.35□□□□□ -2.35
TOP2AP11388 RPS25P9-201ENST00000435591 252 ntBASIC0.35□□□□□ -2.35
TOP2AP11388 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC0.35□□□□□ -2.35
TOP2AP11388 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC0.34□□□□□ -2.35
TOP2AP11388 BX248409.1-201ENST00000455497 255 ntBASIC0.34□□□□□ -2.35
TOP2AP11388 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC0.34□□□□□ -2.35
TOP2AP11388 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC0.34□□□□□ -2.35
TOP2AP11388 FAM106CP-201ENST00000582212 507 ntBASIC0.34□□□□□ -2.35
TOP2AP11388 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.34□□□□□ -2.35
TOP2AP11388 FRG1HP-204ENST00000617940 757 ntBASIC0.34□□□□□ -2.35
TOP2AP11388 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC0.34□□□□□ -2.35
TOP2AP11388 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC0.34□□□□□ -2.35
TOP2AP11388 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.34□□□□□ -2.36
TOP2AP11388 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC0.33□□□□□ -2.36
TOP2AP11388 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC0.33□□□□□ -2.36
TOP2AP11388 RNU6-902P-201ENST00000517212 91 ntBASIC0.33□□□□□ -2.36
TOP2AP11388 MIR424-201ENST00000362227 98 ntBASIC0.33□□□□□ -2.36
TOP2AP11388 U3.29-201ENST00000391296 212 ntBASIC0.33□□□□□ -2.36
TOP2AP11388 EDDM3CP-201ENST00000415977 425 ntBASIC0.33□□□□□ -2.36
TOP2AP11388 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC0.33□□□□□ -2.36
TOP2AP11388 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC0.33□□□□□ -2.36
TOP2AP11388 MRPS36P2-201ENST00000512569 299 ntBASIC0.33□□□□□ -2.36
TOP2AP11388 AP003717.3-201ENST00000544832 1180 ntBASIC0.33□□□□□ -2.36
TOP2AP11388 MIR3126-201ENST00000577443 74 ntBASIC0.33□□□□□ -2.36
TOP2AP11388 AC092474.3-201ENST00000603022 568 ntBASIC0.33□□□□□ -2.36
TOP2AP11388 AC018638.7-201ENST00000605836 1114 ntBASIC0.33□□□□□ -2.36
TOP2AP11388 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.32□□□□□ -2.36
TOP2AP11388 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC0.32□□□□□ -2.36
TOP2AP11388 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC0.32□□□□□ -2.36
TOP2AP11388 RNU6-173P-201ENST00000364215 104 ntBASIC0.32□□□□□ -2.36
TOP2AP11388 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.32□□□□□ -2.36
TOP2AP11388 AC087588.1-201ENST00000462203 316 ntBASIC0.32□□□□□ -2.36
TOP2AP11388 TRBVB-201ENST00000477100 408 ntBASIC0.32□□□□□ -2.36
TOP2AP11388 AC146944.4-201ENST00000602697 718 ntBASIC0.32□□□□□ -2.36
TOP2AP11388 AC004492.1-201ENST00000607036 742 ntBASIC0.32□□□□□ -2.36
TOP2AP11388 AL138726.1-201ENST00000614873 333 ntBASIC0.32□□□□□ -2.36
TOP2AP11388 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC0.32□□□□□ -2.36
TOP2AP11388 RNU6-105P-201ENST00000363909 104 ntBASIC0.31□□□□□ -2.36
TOP2AP11388 MIR767-201ENST00000390228 109 ntBASIC0.31□□□□□ -2.36
TOP2AP11388 RPS3AP37-201ENST00000419176 745 ntBASIC0.31□□□□□ -2.36
TOP2AP11388 AC010099.3-201ENST00000423896 409 ntBASIC0.31□□□□□ -2.36
TOP2AP11388 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC0.31□□□□□ -2.36
TOP2AP11388 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC0.31□□□□□ -2.36
TOP2AP11388 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC0.31□□□□□ -2.36
TOP2AP11388 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC0.31□□□□□ -2.36
TOP2AP11388 RAB11AP2-201ENST00000545905 639 ntBASIC0.31□□□□□ -2.36
TOP2AP11388 AL669831.4-202ENST00000590817 238 ntBASIC0.31□□□□□ -2.36
TOP2AP11388 Y_RNA.476-201ENST00000384347 108 ntBASIC0.3□□□□□ -2.36
TOP2AP11388 TRIM60P3Y-201ENST00000432201 673 ntBASIC0.3□□□□□ -2.36
TOP2AP11388 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC0.3□□□□□ -2.36
TOP2AP11388 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC0.3□□□□□ -2.36
TOP2AP11388 AL589880.1-201ENST00000448271 287 ntBASIC0.3□□□□□ -2.36
TOP2AP11388 HMGB1P35-201ENST00000503360 598 ntBASIC0.3□□□□□ -2.36
TOP2AP11388 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC0.3□□□□□ -2.36
TOP2AP11388 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.3□□□□□ -2.36
TOP2AP11388 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC0.3□□□□□ -2.36
TOP2AP11388 MIR5589-201ENST00000579442 60 ntBASIC0.3□□□□□ -2.36
TOP2AP11388 AC004852.3-201ENST00000614131 326 ntBASIC0.3□□□□□ -2.36
TOP2AP11388 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.29□□□□□ -2.36
TOP2AP11388 OR8K4P-201ENST00000534608 872 ntBASIC0.29□□□□□ -2.36
TOP2AP11388 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.29□□□□□ -2.36
TOP2AP11388 MIR4802-201ENST00000581881 80 ntBASIC0.29□□□□□ -2.36
TOP2AP11388 U3.13-201ENST00000364804 214 ntBASIC0.28□□□□□ -2.36
TOP2AP11388 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.28□□□□□ -2.36
TOP2AP11388 RNU6-26P-201ENST00000383985 107 ntBASIC0.28□□□□□ -2.36
TOP2AP11388 HMGN2P39-201ENST00000398005 273 ntBASIC0.28□□□□□ -2.36
TOP2AP11388 MRPS36P1-201ENST00000421291 307 ntBASIC0.28□□□□□ -2.36
TOP2AP11388 AC098614.2-201ENST00000426040 255 ntBASIC0.28□□□□□ -2.36
TOP2AP11388 MTND6P13-201ENST00000443510 523 ntBASIC0.28□□□□□ -2.36
TOP2AP11388 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC0.28□□□□□ -2.36
TOP2AP11388 RPL30P7-201ENST00000479312 323 ntBASIC0.28□□□□□ -2.36
TOP2AP11388 AL133373.1-201ENST00000497098 94 ntBASIC0.28□□□□□ -2.36
TOP2AP11388 AP003122.4-201ENST00000530980 758 ntBASIC0.28□□□□□ -2.36
TOP2AP11388 AC073569.3-201ENST00000619055 682 ntBASIC0.28□□□□□ -2.36
TOP2AP11388 AC110792.3-201ENST00000595906 1614 ntBASIC0.28□□□□□ -2.36
TOP2AP11388 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC0.28□□□□□ -2.36
TOP2AP11388 ELOCP11-201ENST00000436690 332 ntBASIC0.28□□□□□ -2.37
TOP2AP11388 ELOCP16-201ENST00000444494 332 ntBASIC0.28□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 117.4 ms