Protein–RNA interactions for Protein: P0DMS9

TMIGD3, Transmembrane domain-containing protein TMIGD3, humanhuman

Predicted RBP Predictions only

Length 266 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMIGD3P0DMS9 AP003122.3-201ENST00000526316 255 ntBASIC3.38□□□□□ -1.87
TMIGD3P0DMS9 AC084851.1-201ENST00000529105 249 ntBASIC3.38□□□□□ -1.87
TMIGD3P0DMS9 AP000889.2-201ENST00000532684 490 ntBASIC3.38□□□□□ -1.87
TMIGD3P0DMS9 GLYCAM1-201ENST00000546596 285 ntBASIC3.38□□□□□ -1.87
TMIGD3P0DMS9 AC093027.1-201ENST00000546698 429 ntBASIC3.38□□□□□ -1.87
TMIGD3P0DMS9 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.38□□□□□ -1.87
TMIGD3P0DMS9 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.38□□□□□ -1.87
TMIGD3P0DMS9 AL157871.3-201ENST00000557231 293 ntBASIC3.38□□□□□ -1.87
TMIGD3P0DMS9 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC3.38□□□□□ -1.87
TMIGD3P0DMS9 MIR3941-201ENST00000582572 103 ntBASIC3.38□□□□□ -1.87
TMIGD3P0DMS9 MIR5187-201ENST00000583479 76 ntBASIC3.38□□□□□ -1.87
TMIGD3P0DMS9 SNORD39.4-201ENST00000620099 78 ntBASIC3.38□□□□□ -1.87
TMIGD3P0DMS9 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
TMIGD3P0DMS9 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.38□□□□□ -1.87
TMIGD3P0DMS9 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
TMIGD3P0DMS9 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
TMIGD3P0DMS9 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.37□□□□□ -1.87
TMIGD3P0DMS9 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
TMIGD3P0DMS9 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
TMIGD3P0DMS9 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
TMIGD3P0DMS9 Y_RNA.535-201ENST00000384612 99 ntBASIC3.37□□□□□ -1.87
TMIGD3P0DMS9 MIR325-201ENST00000385260 98 ntBASIC3.37□□□□□ -1.87
TMIGD3P0DMS9 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
TMIGD3P0DMS9 SAR1AP2-201ENST00000392696 594 ntBASIC3.37□□□□□ -1.87
TMIGD3P0DMS9 SNORA11.2-201ENST00000408318 127 ntBASIC3.37□□□□□ -1.87
TMIGD3P0DMS9 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
TMIGD3P0DMS9 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.37□□□□□ -1.87
TMIGD3P0DMS9 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC3.37□□□□□ -1.87
TMIGD3P0DMS9 AL158156.1-201ENST00000422509 473 ntBASIC3.37□□□□□ -1.87
TMIGD3P0DMS9 AC092573.2-201ENST00000434546 243 ntBASIC3.37□□□□□ -1.87
TMIGD3P0DMS9 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.37□□□□□ -1.87
TMIGD3P0DMS9 Z82210.1-201ENST00000440037 231 ntBASIC3.37□□□□□ -1.87
TMIGD3P0DMS9 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.37□□□□□ -1.87
TMIGD3P0DMS9 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.37□□□□□ -1.87
TMIGD3P0DMS9 AL031183.1-201ENST00000457667 207 ntBASIC3.37□□□□□ -1.87
TMIGD3P0DMS9 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.37□□□□□ -1.87
TMIGD3P0DMS9 AC087884.1-201ENST00000469738 328 ntBASIC3.37□□□□□ -1.87
TMIGD3P0DMS9 TRBV12-2-201ENST00000489763 344 ntBASIC3.37□□□□□ -1.87
TMIGD3P0DMS9 AC022493.1-201ENST00000492984 337 ntBASIC3.37□□□□□ -1.87
TMIGD3P0DMS9 RPL30P5-201ENST00000494923 336 ntBASIC3.37□□□□□ -1.87
TMIGD3P0DMS9 TRBVA-201ENST00000498804 316 ntBASIC3.37□□□□□ -1.87
TMIGD3P0DMS9 MTND3P25-201ENST00000509243 135 ntBASIC3.37□□□□□ -1.87
TMIGD3P0DMS9 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.37□□□□□ -1.87
TMIGD3P0DMS9 RNU6-277P-201ENST00000516272 106 ntBASIC3.37□□□□□ -1.87
TMIGD3P0DMS9 RNU6-1069P-201ENST00000516612 133 ntBASIC3.37□□□□□ -1.87
TMIGD3P0DMS9 RNU6-256P-201ENST00000516747 97 ntBASIC3.37□□□□□ -1.87
TMIGD3P0DMS9 RNU6-1088P-201ENST00000516850 104 ntBASIC3.37□□□□□ -1.87
TMIGD3P0DMS9 RNU6-273P-201ENST00000516937 96 ntBASIC3.37□□□□□ -1.87
TMIGD3P0DMS9 AP000889.1-201ENST00000530968 660 ntBASIC3.37□□□□□ -1.87
TMIGD3P0DMS9 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.37□□□□□ -1.87
TMIGD3P0DMS9 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC3.37□□□□□ -1.87
TMIGD3P0DMS9 AC090877.1-201ENST00000561418 344 ntBASIC3.37□□□□□ -1.87
TMIGD3P0DMS9 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.37□□□□□ -1.87
TMIGD3P0DMS9 MIR3672-201ENST00000584290 82 ntBASIC3.37□□□□□ -1.87
TMIGD3P0DMS9 MIR5692C1-201ENST00000585309 91 ntBASIC3.37□□□□□ -1.87
TMIGD3P0DMS9 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.37□□□□□ -1.87
TMIGD3P0DMS9 uc_338.15-201ENST00000615470 191 ntBASIC3.37□□□□□ -1.87
TMIGD3P0DMS9 AL138880.2-201ENST00000616214 239 ntBASIC3.37□□□□□ -1.87
TMIGD3P0DMS9 U7.8-201ENST00000619968 63 ntBASIC3.37□□□□□ -1.87
TMIGD3P0DMS9 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.37□□□□□ -1.87
TMIGD3P0DMS9 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.37□□□□□ -1.87
TMIGD3P0DMS9 AC244205.2-202ENST00000635781 342 ntBASIC3.37□□□□□ -1.87
TMIGD3P0DMS9 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
TMIGD3P0DMS9 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
TMIGD3P0DMS9 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
TMIGD3P0DMS9 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
TMIGD3P0DMS9 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.37□□□□□ -1.87
TMIGD3P0DMS9 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
TMIGD3P0DMS9 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
TMIGD3P0DMS9 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC3.36□□□□□ -1.87
TMIGD3P0DMS9 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.36□□□□□ -1.87
TMIGD3P0DMS9 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
TMIGD3P0DMS9 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
TMIGD3P0DMS9 Y_RNA.33-201ENST00000362591 102 ntBASIC3.36□□□□□ -1.87
TMIGD3P0DMS9 Y_RNA.813-201ENST00000364639 102 ntBASIC3.36□□□□□ -1.87
TMIGD3P0DMS9 RNU6-395P-201ENST00000365662 106 ntBASIC3.36□□□□□ -1.87
TMIGD3P0DMS9 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.36□□□□□ -1.87
TMIGD3P0DMS9 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
TMIGD3P0DMS9 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
TMIGD3P0DMS9 MIR450B-201ENST00000401182 78 ntBASIC3.36□□□□□ -1.87
TMIGD3P0DMS9 HLFP1-201ENST00000402375 499 ntBASIC3.36□□□□□ -1.87
TMIGD3P0DMS9 RNU6-1025P-201ENST00000410629 104 ntBASIC3.36□□□□□ -1.87
TMIGD3P0DMS9 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.36□□□□□ -1.87
TMIGD3P0DMS9 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.36□□□□□ -1.87
TMIGD3P0DMS9 AC005019.1-201ENST00000436455 431 ntBASIC3.36□□□□□ -1.87
TMIGD3P0DMS9 RPS3AP12-201ENST00000443616 753 ntBASIC3.36□□□□□ -1.87
TMIGD3P0DMS9 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.36□□□□□ -1.87
TMIGD3P0DMS9 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC3.36□□□□□ -1.87
TMIGD3P0DMS9 AC117503.1-201ENST00000472241 394 ntBASIC3.36□□□□□ -1.87
TMIGD3P0DMS9 AC084357.1-201ENST00000473404 255 ntBASIC3.36□□□□□ -1.87
TMIGD3P0DMS9 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC3.36□□□□□ -1.87
TMIGD3P0DMS9 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC3.36□□□□□ -1.87
TMIGD3P0DMS9 AC006445.2-201ENST00000510061 472 ntBASIC3.36□□□□□ -1.87
TMIGD3P0DMS9 AC010265.1-201ENST00000513509 211 ntBASIC3.36□□□□□ -1.87
TMIGD3P0DMS9 CASP1P1-201ENST00000526345 212 ntBASIC3.36□□□□□ -1.87
TMIGD3P0DMS9 CYCSP27-201ENST00000527643 293 ntBASIC3.36□□□□□ -1.87
TMIGD3P0DMS9 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC3.36□□□□□ -1.87
TMIGD3P0DMS9 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3.36□□□□□ -1.87
TMIGD3P0DMS9 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.36□□□□□ -1.87
TMIGD3P0DMS9 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 125.1 ms