Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 AC096576.1-201ENST00000489014 359 ntBASIC4.02□□□□□ -1.77
SNRPA1P09661 Y_RNA.654-201ENST00000497848 106 ntBASIC4.02□□□□□ -1.77
SNRPA1P09661 RANP3-201ENST00000530970 276 ntBASIC4.02□□□□□ -1.77
SNRPA1P09661 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.02□□□□□ -1.77
SNRPA1P09661 AP000763.2-201ENST00000540641 163 ntBASIC4.02□□□□□ -1.77
SNRPA1P09661 DPPA3P3-201ENST00000603842 430 ntBASIC4.02□□□□□ -1.77
SNRPA1P09661 AL033523.1-201ENST00000605153 153 ntBASIC4.02□□□□□ -1.77
SNRPA1P09661 AL670379.4-201ENST00000605279 254 ntBASIC4.02□□□□□ -1.77
SNRPA1P09661 MIR1302-2-201ENST00000607096 138 ntBASIC4.02□□□□□ -1.77
SNRPA1P09661 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC4.02□□□□□ -1.77
SNRPA1P09661 AC012409.4-201ENST00000612923 249 ntBASIC4.02□□□□□ -1.77
SNRPA1P09661 RMST_9.1-201ENST00000619945 193 ntBASIC4.02□□□□□ -1.77
SNRPA1P09661 AL353748.2-201ENST00000622148 471 ntBASIC4.02□□□□□ -1.77
SNRPA1P09661 AC066616.2-201ENST00000559334 1481 ntBASIC4.02□□□□□ -1.77
SNRPA1P09661 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SNRPA1P09661 AP001486.2-201ENST00000561652 5113 ntBASIC4.02□□□□□ -1.77
SNRPA1P09661 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
SNRPA1P09661 AP001350.1-201ENST00000601906 1524 ntBASIC4.01□□□□□ -1.77
SNRPA1P09661 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC4.01□□□□□ -1.77
SNRPA1P09661 Y_RNA.301-201ENST00000364990 103 ntBASIC4.01□□□□□ -1.77
SNRPA1P09661 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
SNRPA1P09661 RNU6-387P-201ENST00000411331 105 ntBASIC4.01□□□□□ -1.77
SNRPA1P09661 USP9YP20-201ENST00000419224 558 ntBASIC4.01□□□□□ -1.77
SNRPA1P09661 MTCO2P12-201ENST00000427426 682 ntBASIC4.01□□□□□ -1.77
SNRPA1P09661 AC079780.1-201ENST00000428259 207 ntBASIC4.01□□□□□ -1.77
SNRPA1P09661 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC4.01□□□□□ -1.77
SNRPA1P09661 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC4.01□□□□□ -1.77
SNRPA1P09661 CEACAMP4-201ENST00000457676 421 ntBASIC4.01□□□□□ -1.77
SNRPA1P09661 SCARNA18-201ENST00000459004 134 ntBASIC4.01□□□□□ -1.77
SNRPA1P09661 RPL21P93-201ENST00000480465 489 ntBASIC4.01□□□□□ -1.77
SNRPA1P09661 AC106872.2-201ENST00000494303 480 ntBASIC4.01□□□□□ -1.77
SNRPA1P09661 RNU6-864P-201ENST00000516256 108 ntBASIC4.01□□□□□ -1.77
SNRPA1P09661 RNU6-685P-201ENST00000517088 95 ntBASIC4.01□□□□□ -1.77
SNRPA1P09661 RN7SKP289-201ENST00000517244 295 ntBASIC4.01□□□□□ -1.77
SNRPA1P09661 AC009812.2-201ENST00000517657 457 ntBASIC4.01□□□□□ -1.77
SNRPA1P09661 AP006587.4-201ENST00000526053 529 ntBASIC4.01□□□□□ -1.77
SNRPA1P09661 AP005597.4-201ENST00000526762 229 ntBASIC4.01□□□□□ -1.77
SNRPA1P09661 OR4H12P-201ENST00000556269 907 ntBASIC4.01□□□□□ -1.77
SNRPA1P09661 H3F3AP1-201ENST00000559984 334 ntBASIC4.01□□□□□ -1.77
SNRPA1P09661 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC4.01□□□□□ -1.77
SNRPA1P09661 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC4.01□□□□□ -1.77
SNRPA1P09661 AC092747.3-201ENST00000603769 301 ntBASIC4.01□□□□□ -1.77
SNRPA1P09661 AC113139.1-201ENST00000605049 239 ntBASIC4.01□□□□□ -1.77
SNRPA1P09661 uc_338.15-201ENST00000615470 191 ntBASIC4.01□□□□□ -1.77
SNRPA1P09661 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC4.01□□□□□ -1.77
SNRPA1P09661 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
SNRPA1P09661 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
SNRPA1P09661 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
SNRPA1P09661 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SNRPA1P09661 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
SNRPA1P09661 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC4□□□□□ -1.77
SNRPA1P09661 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4□□□□□ -1.77
SNRPA1P09661 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
SNRPA1P09661 SNORA63-201ENST00000363450 132 ntBASIC4□□□□□ -1.77
SNRPA1P09661 SNORA71.1-201ENST00000364523 117 ntBASIC4□□□□□ -1.77
SNRPA1P09661 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
SNRPA1P09661 RNU6-1227P-201ENST00000383981 107 ntBASIC4□□□□□ -1.77
SNRPA1P09661 Y_RNA.510-201ENST00000384511 114 ntBASIC4□□□□□ -1.77
SNRPA1P09661 HIST1H2APS3-201ENST00000403259 134 ntBASIC4□□□□□ -1.77
SNRPA1P09661 HSPE1P26-201ENST00000405341 275 ntBASIC4□□□□□ -1.77
SNRPA1P09661 AC092809.3-201ENST00000415453 231 ntBASIC4□□□□□ -1.77
SNRPA1P09661 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC4□□□□□ -1.77
SNRPA1P09661 AC107083.1-201ENST00000439643 279 ntBASIC4□□□□□ -1.77
SNRPA1P09661 AL121871.1-201ENST00000443413 436 ntBASIC4□□□□□ -1.77
SNRPA1P09661 NEFMP1-201ENST00000443423 1006 ntBASIC4□□□□□ -1.77
SNRPA1P09661 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC4□□□□□ -1.77
SNRPA1P09661 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC4□□□□□ -1.77
SNRPA1P09661 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC4□□□□□ -1.77
SNRPA1P09661 SNORA31.22-201ENST00000517204 135 ntBASIC4□□□□□ -1.77
SNRPA1P09661 RNU6-840P-201ENST00000517275 65 ntBASIC4□□□□□ -1.77
SNRPA1P09661 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC4□□□□□ -1.77
SNRPA1P09661 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC4□□□□□ -1.77
SNRPA1P09661 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC4□□□□□ -1.77
SNRPA1P09661 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC4□□□□□ -1.77
SNRPA1P09661 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC4□□□□□ -1.77
SNRPA1P09661 AC005034.5-201ENST00000604219 466 ntBASIC4□□□□□ -1.77
SNRPA1P09661 AL022345.1-201ENST00000607292 135 ntBASIC4□□□□□ -1.77
SNRPA1P09661 Z82243.1-201ENST00000609432 473 ntBASIC4□□□□□ -1.77
SNRPA1P09661 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC4□□□□□ -1.77
SNRPA1P09661 AC007998.5-201ENST00000622938 237 ntBASIC4□□□□□ -1.77
SNRPA1P09661 AC048347.1-201ENST00000624621 427 ntBASIC4□□□□□ -1.77
SNRPA1P09661 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SNRPA1P09661 AF117829.1-206ENST00000621883 3802 ntBASIC3.99□□□□□ -1.77
SNRPA1P09661 AC103710.2-202ENST00000641454 2853 ntBASIC3.99□□□□□ -1.77
SNRPA1P09661 Y_RNA.138-201ENST00000363462 102 ntBASIC3.99□□□□□ -1.77
SNRPA1P09661 Y_RNA.387-201ENST00000383918 102 ntBASIC3.99□□□□□ -1.77
SNRPA1P09661 RNU6-1074P-201ENST00000383995 104 ntBASIC3.99□□□□□ -1.77
SNRPA1P09661 Y_RNA.431-201ENST00000384086 102 ntBASIC3.99□□□□□ -1.77
SNRPA1P09661 RNU6-1127P-201ENST00000384580 107 ntBASIC3.99□□□□□ -1.77
SNRPA1P09661 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
SNRPA1P09661 RNA5SP111-201ENST00000411386 101 ntBASIC3.99□□□□□ -1.77
SNRPA1P09661 POLHP1-201ENST00000411806 470 ntBASIC3.99□□□□□ -1.77
SNRPA1P09661 AC005534.2-201ENST00000431047 433 ntBASIC3.99□□□□□ -1.77
SNRPA1P09661 RPS15AP27-201ENST00000449183 343 ntBASIC3.99□□□□□ -1.77
SNRPA1P09661 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC3.99□□□□□ -1.77
SNRPA1P09661 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.99□□□□□ -1.77
SNRPA1P09661 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.99□□□□□ -1.77
SNRPA1P09661 Y_RNA.682-201ENST00000516457 100 ntBASIC3.99□□□□□ -1.77
SNRPA1P09661 Y_RNA.689-201ENST00000516589 107 ntBASIC3.99□□□□□ -1.77
SNRPA1P09661 RNU6-1088P-201ENST00000516850 104 ntBASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms