Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 SNRPGP17-201ENST00000603780 214 ntBASIC1.82□□□□□ -2.12
TPM1P09493 AC099785.1-201ENST00000605697 437 ntBASIC1.82□□□□□ -2.12
TPM1P09493 AC034229.4-201ENST00000607861 441 ntBASIC1.82□□□□□ -2.12
TPM1P09493 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.82□□□□□ -2.12
TPM1P09493 AC013470.4-201ENST00000619978 986 ntBASIC1.82□□□□□ -2.12
TPM1P09493 AC097655.1-201ENST00000635075 318 ntBASIC1.82□□□□□ -2.12
TPM1P09493 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.81□□□□□ -2.12
TPM1P09493 AP000648.3-201ENST00000623539 4507 ntBASIC1.81□□□□□ -2.12
TPM1P09493 RNU1-23P-201ENST00000363361 144 ntBASIC1.81□□□□□ -2.12
TPM1P09493 RNU6-188P-201ENST00000364207 107 ntBASIC1.81□□□□□ -2.12
TPM1P09493 RNU6-1280P-201ENST00000365211 107 ntBASIC1.81□□□□□ -2.12
TPM1P09493 OR9R1P-201ENST00000412200 877 ntBASIC1.81□□□□□ -2.12
TPM1P09493 VN1R36P-201ENST00000414936 291 ntBASIC1.81□□□□□ -2.12
TPM1P09493 OR51A5P-201ENST00000415429 942 ntBASIC1.81□□□□□ -2.12
TPM1P09493 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
TPM1P09493 AC104651.1-201ENST00000427559 735 ntBASIC1.81□□□□□ -2.12
TPM1P09493 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC1.81□□□□□ -2.12
TPM1P09493 USP9YP24-201ENST00000434374 697 ntBASIC1.81□□□□□ -2.12
TPM1P09493 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC1.81□□□□□ -2.12
TPM1P09493 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.81□□□□□ -2.12
TPM1P09493 AC117522.2-201ENST00000510049 657 ntBASIC1.81□□□□□ -2.12
TPM1P09493 RNU6-678P-201ENST00000516832 109 ntBASIC1.81□□□□□ -2.12
TPM1P09493 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC1.81□□□□□ -2.12
TPM1P09493 AC084851.1-201ENST00000529105 249 ntBASIC1.81□□□□□ -2.12
TPM1P09493 DUXAP5-201ENST00000529668 529 ntBASIC1.81□□□□□ -2.12
TPM1P09493 OR5B19P-201ENST00000531766 928 ntBASIC1.81□□□□□ -2.12
TPM1P09493 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC1.81□□□□□ -2.12
TPM1P09493 AC060771.1-201ENST00000582031 164 ntBASIC1.81□□□□□ -2.12
TPM1P09493 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.81□□□□□ -2.12
TPM1P09493 AC087045.1-201ENST00000605856 382 ntBASIC1.81□□□□□ -2.12
TPM1P09493 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.81□□□□□ -2.12
TPM1P09493 U6.99-201ENST00000637524 83 ntBASIC1.81□□□□□ -2.12
TPM1P09493 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
TPM1P09493 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
TPM1P09493 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.8□□□□□ -2.12
TPM1P09493 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
TPM1P09493 Z98749.2-208ENST00000381646 500 ntBASIC1.8□□□□□ -2.12
TPM1P09493 AL359634.1-202ENST00000404721 284 ntBASIC1.8□□□□□ -2.12
TPM1P09493 AL360221.1-201ENST00000445989 335 ntBASIC1.8□□□□□ -2.12
TPM1P09493 ELOCP30-201ENST00000447108 299 ntBASIC1.8□□□□□ -2.12
TPM1P09493 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC1.8□□□□□ -2.12
TPM1P09493 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.8□□□□□ -2.12
TPM1P09493 SNORA31.3-201ENST00000516029 96 ntBASIC1.8□□□□□ -2.12
TPM1P09493 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC1.8□□□□□ -2.12
TPM1P09493 UTP23-205ENST00000520733 369 ntTSL 3 BASIC1.8□□□□□ -2.12
TPM1P09493 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC1.8□□□□□ -2.12
TPM1P09493 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC1.8□□□□□ -2.12
TPM1P09493 AL132657.2-201ENST00000564417 358 ntBASIC1.8□□□□□ -2.12
TPM1P09493 ELOCP5-201ENST00000604924 333 ntBASIC1.8□□□□□ -2.12
TPM1P09493 NDUFA8P1-201ENST00000605525 367 ntBASIC1.8□□□□□ -2.12
TPM1P09493 RNU6-91P-201ENST00000607774 107 ntBASIC1.8□□□□□ -2.12
TPM1P09493 AC091948.2-201ENST00000636510 279 ntBASIC1.8□□□□□ -2.12
TPM1P09493 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
TPM1P09493 RNU5E-1-201ENST00000362477 120 ntBASIC1.79□□□□□ -2.12
TPM1P09493 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.79□□□□□ -2.12
TPM1P09493 MIR583-201ENST00000384846 75 ntBASIC1.79□□□□□ -2.12
TPM1P09493 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC1.79□□□□□ -2.12
TPM1P09493 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC1.79□□□□□ -2.12
TPM1P09493 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC1.79□□□□□ -2.12
TPM1P09493 BRK1P2-201ENST00000442875 223 ntBASIC1.79□□□□□ -2.12
TPM1P09493 NDUFAF4P2-201ENST00000445374 520 ntBASIC1.79□□□□□ -2.12
TPM1P09493 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.79□□□□□ -2.12
TPM1P09493 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.79□□□□□ -2.12
TPM1P09493 AC008834.1-201ENST00000511612 175 ntBASIC1.79□□□□□ -2.12
TPM1P09493 AC010486.1-201ENST00000511793 424 ntBASIC1.79□□□□□ -2.12
TPM1P09493 AP003355.1-201ENST00000518956 587 ntBASIC1.79□□□□□ -2.12
TPM1P09493 AC005832.3-201ENST00000537929 631 ntBASIC1.79□□□□□ -2.12
TPM1P09493 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC1.79□□□□□ -2.12
TPM1P09493 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.79□□□□□ -2.12
TPM1P09493 AL512347.1-201ENST00000566420 503 ntBASIC1.79□□□□□ -2.12
TPM1P09493 AC126365.2-201ENST00000580630 379 ntBASIC1.79□□□□□ -2.12
TPM1P09493 MIR4285-201ENST00000581001 85 ntBASIC1.79□□□□□ -2.12
TPM1P09493 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC1.79□□□□□ -2.12
TPM1P09493 AC090186.1-201ENST00000605991 572 ntBASIC1.79□□□□□ -2.12
TPM1P09493 AC103810.8-201ENST00000607347 118 ntBASIC1.79□□□□□ -2.12
TPM1P09493 AC084768.2-201ENST00000622736 221 ntBASIC1.79□□□□□ -2.12
TPM1P09493 AP000676.3-201ENST00000623299 569 ntBASIC1.79□□□□□ -2.12
TPM1P09493 AP003485.1-201ENST00000625093 753 ntBASIC1.79□□□□□ -2.12
TPM1P09493 AC010149.2-201ENST00000637608 315 ntBASIC1.79□□□□□ -2.12
TPM1P09493 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
TPM1P09493 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.78□□□□□ -2.12
TPM1P09493 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC1.78□□□□□ -2.12
TPM1P09493 AL590084.1-201ENST00000407885 387 ntBASIC1.78□□□□□ -2.12
TPM1P09493 RN7SKP101-201ENST00000411376 320 ntBASIC1.78□□□□□ -2.12
TPM1P09493 RPL7P54-201ENST00000438336 674 ntBASIC1.78□□□□□ -2.12
TPM1P09493 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC1.78□□□□□ -2.12
TPM1P09493 ANXA2P1-201ENST00000505539 926 ntBASIC1.78□□□□□ -2.12
TPM1P09493 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC1.78□□□□□ -2.12
TPM1P09493 RNU5B-3P-201ENST00000516601 115 ntBASIC1.78□□□□□ -2.12
TPM1P09493 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC1.78□□□□□ -2.12
TPM1P09493 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC1.78□□□□□ -2.12
TPM1P09493 AC023825.1-201ENST00000566704 1030 ntBASIC1.78□□□□□ -2.12
TPM1P09493 MIR4648-201ENST00000580107 72 ntBASIC1.78□□□□□ -2.12
TPM1P09493 AC021646.1-201ENST00000605469 484 ntBASIC1.78□□□□□ -2.12
TPM1P09493 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.78□□□□□ -2.12
TPM1P09493 AC126118.1-201ENST00000607744 628 ntBASIC1.78□□□□□ -2.12
TPM1P09493 AC068944.2-201ENST00000610373 403 ntBASIC1.78□□□□□ -2.12
TPM1P09493 uc_338.5-201ENST00000611839 155 ntBASIC1.78□□□□□ -2.12
TPM1P09493 AC108479.2-201ENST00000617314 601 ntBASIC1.78□□□□□ -2.12
TPM1P09493 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms