Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC1.48□□□□□ -2.17
HLA-DQB2P05538 AL161798.1-201ENST00000604630 131 ntBASIC1.48□□□□□ -2.17
HLA-DQB2P05538 AL512506.1-201ENST00000613918 449 ntBASIC1.48□□□□□ -2.17
HLA-DQB2P05538 AC008555.8-201ENST00000623602 2168 ntBASIC1.48□□□□□ -2.17
HLA-DQB2P05538 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
HLA-DQB2P05538 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC1.47□□□□□ -2.17
HLA-DQB2P05538 RNU6-19P-201ENST00000384718 107 ntBASIC1.47□□□□□ -2.17
HLA-DQB2P05538 MIR147B-201ENST00000390185 80 ntBASIC1.47□□□□□ -2.17
HLA-DQB2P05538 AL356421.1-201ENST00000403255 413 ntBASIC1.47□□□□□ -2.17
HLA-DQB2P05538 NDUFS5P1-201ENST00000405668 289 ntBASIC1.47□□□□□ -2.17
HLA-DQB2P05538 RNU2-63P-201ENST00000410792 194 ntBASIC1.47□□□□□ -2.17
HLA-DQB2P05538 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC1.47□□□□□ -2.17
HLA-DQB2P05538 FABP5P15-201ENST00000453566 214 ntBASIC1.47□□□□□ -2.17
HLA-DQB2P05538 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.47□□□□□ -2.17
HLA-DQB2P05538 RPS15AP36-201ENST00000492022 382 ntBASIC1.47□□□□□ -2.17
HLA-DQB2P05538 SMURF2P1-201ENST00000514992 481 ntBASIC1.47□□□□□ -2.17
HLA-DQB2P05538 SNORA25.11-201ENST00000515935 105 ntBASIC1.47□□□□□ -2.17
HLA-DQB2P05538 AC023538.1-201ENST00000534576 736 ntBASIC1.47□□□□□ -2.17
HLA-DQB2P05538 MRPS36P5-201ENST00000551909 298 ntBASIC1.47□□□□□ -2.17
HLA-DQB2P05538 AL121821.2-201ENST00000556081 394 ntBASIC1.47□□□□□ -2.17
HLA-DQB2P05538 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC1.47□□□□□ -2.17
HLA-DQB2P05538 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC1.47□□□□□ -2.17
HLA-DQB2P05538 MIR3126-201ENST00000577443 74 ntBASIC1.47□□□□□ -2.17
HLA-DQB2P05538 AC103987.3-201ENST00000582071 292 ntBASIC1.47□□□□□ -2.17
HLA-DQB2P05538 AC021171.1-201ENST00000603137 706 ntBASIC1.47□□□□□ -2.17
HLA-DQB2P05538 AL355598.1-201ENST00000604169 202 ntBASIC1.47□□□□□ -2.17
HLA-DQB2P05538 AC005034.5-201ENST00000604219 466 ntBASIC1.47□□□□□ -2.17
HLA-DQB2P05538 AF129408.1-201ENST00000608767 431 ntBASIC1.47□□□□□ -2.17
HLA-DQB2P05538 AC022202.1-201ENST00000613515 211 ntBASIC1.47□□□□□ -2.17
HLA-DQB2P05538 AL109620.1-201ENST00000618738 1197 ntBASIC1.47□□□□□ -2.17
HLA-DQB2P05538 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC1.47□□□□□ -2.17
HLA-DQB2P05538 AP000648.3-201ENST00000623539 4507 ntBASIC1.47□□□□□ -2.17
HLA-DQB2P05538 ZNF702P-202ENST00000434269 1966 ntBASIC1.47□□□□□ -2.17
HLA-DQB2P05538 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
HLA-DQB2P05538 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
HLA-DQB2P05538 RNA5SP99-201ENST00000364020 114 ntBASIC1.46□□□□□ -2.18
HLA-DQB2P05538 U8.10-201ENST00000384260 133 ntBASIC1.46□□□□□ -2.18
HLA-DQB2P05538 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC1.46□□□□□ -2.18
HLA-DQB2P05538 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC1.46□□□□□ -2.18
HLA-DQB2P05538 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.46□□□□□ -2.18
HLA-DQB2P05538 PTGES3P4-201ENST00000426243 356 ntBASIC1.46□□□□□ -2.18
HLA-DQB2P05538 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC1.46□□□□□ -2.18
HLA-DQB2P05538 AC104563.1-201ENST00000476147 376 ntBASIC1.46□□□□□ -2.18
HLA-DQB2P05538 AC018437.1-201ENST00000492214 406 ntBASIC1.46□□□□□ -2.18
HLA-DQB2P05538 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC1.46□□□□□ -2.18
HLA-DQB2P05538 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC1.46□□□□□ -2.18
HLA-DQB2P05538 RNY4P37-201ENST00000516225 96 ntBASIC1.46□□□□□ -2.18
HLA-DQB2P05538 RNU6-390P-201ENST00000516259 103 ntBASIC1.46□□□□□ -2.18
HLA-DQB2P05538 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.46□□□□□ -2.18
HLA-DQB2P05538 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
HLA-DQB2P05538 AC023825.1-201ENST00000566704 1030 ntBASIC1.46□□□□□ -2.18
HLA-DQB2P05538 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
HLA-DQB2P05538 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
HLA-DQB2P05538 AC073544.2-201ENST00000601155 540 ntBASIC1.46□□□□□ -2.18
HLA-DQB2P05538 MTCYBP22-201ENST00000603788 447 ntBASIC1.46□□□□□ -2.18
HLA-DQB2P05538 AC099785.1-201ENST00000605697 437 ntBASIC1.46□□□□□ -2.18
HLA-DQB2P05538 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC1.46□□□□□ -2.18
HLA-DQB2P05538 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC1.46□□□□□ -2.18
HLA-DQB2P05538 AL356094.1-201ENST00000624663 1212 ntBASIC1.46□□□□□ -2.18
HLA-DQB2P05538 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.46□□□□□ -2.18
HLA-DQB2P05538 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
HLA-DQB2P05538 Z75746.1-201ENST00000440243 2080 ntBASIC1.45□□□□□ -2.18
HLA-DQB2P05538 snoZ40.1-201ENST00000364540 72 ntBASIC1.45□□□□□ -2.18
HLA-DQB2P05538 MIR95-201ENST00000385072 81 ntBASIC1.45□□□□□ -2.18
HLA-DQB2P05538 AL356432.1-201ENST00000405809 419 ntBASIC1.45□□□□□ -2.18
HLA-DQB2P05538 RNA5SP450-201ENST00000411206 102 ntBASIC1.45□□□□□ -2.18
HLA-DQB2P05538 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.45□□□□□ -2.18
HLA-DQB2P05538 PGBD4P6-201ENST00000421501 610 ntBASIC1.45□□□□□ -2.18
HLA-DQB2P05538 ISCA1P1-201ENST00000426679 387 ntBASIC1.45□□□□□ -2.18
HLA-DQB2P05538 AC244035.1-201ENST00000430042 390 ntBASIC1.45□□□□□ -2.18
HLA-DQB2P05538 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
HLA-DQB2P05538 AC009238.1-201ENST00000442165 424 ntBASIC1.45□□□□□ -2.18
HLA-DQB2P05538 AC009237.6-201ENST00000446969 424 ntBASIC1.45□□□□□ -2.18
HLA-DQB2P05538 snoU109.1-201ENST00000459339 135 ntBASIC1.45□□□□□ -2.18
HLA-DQB2P05538 AC117503.1-201ENST00000472241 394 ntBASIC1.45□□□□□ -2.18
HLA-DQB2P05538 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC1.45□□□□□ -2.18
HLA-DQB2P05538 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC1.45□□□□□ -2.18
HLA-DQB2P05538 AP003355.1-201ENST00000518956 587 ntBASIC1.45□□□□□ -2.18
HLA-DQB2P05538 AC107953.1-201ENST00000522216 297 ntBASIC1.45□□□□□ -2.18
HLA-DQB2P05538 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC1.45□□□□□ -2.18
HLA-DQB2P05538 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC1.45□□□□□ -2.18
HLA-DQB2P05538 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC1.45□□□□□ -2.18
HLA-DQB2P05538 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC1.45□□□□□ -2.18
HLA-DQB2P05538 AC090079.2-201ENST00000575289 768 ntBASIC1.45□□□□□ -2.18
HLA-DQB2P05538 UBE2L4-201ENST00000587688 464 ntBASIC1.45□□□□□ -2.18
HLA-DQB2P05538 BNIP3P23-201ENST00000599655 511 ntBASIC1.45□□□□□ -2.18
HLA-DQB2P05538 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
HLA-DQB2P05538 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
HLA-DQB2P05538 AL353997.5-201ENST00000618886 171 ntBASIC1.45□□□□□ -2.18
HLA-DQB2P05538 PCF11-AS1-201ENST00000602322 1516 ntBASIC1.45□□□□□ -2.18
HLA-DQB2P05538 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
HLA-DQB2P05538 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
HLA-DQB2P05538 RNU6-661P-201ENST00000362409 107 ntBASIC1.44□□□□□ -2.18
HLA-DQB2P05538 RNU6-658P-201ENST00000384606 106 ntBASIC1.44□□□□□ -2.18
HLA-DQB2P05538 RNU6-997P-201ENST00000384725 107 ntBASIC1.44□□□□□ -2.18
HLA-DQB2P05538 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC1.44□□□□□ -2.18
HLA-DQB2P05538 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC1.44□□□□□ -2.18
HLA-DQB2P05538 AC017099.1-201ENST00000448261 1028 ntBASIC1.44□□□□□ -2.18
HLA-DQB2P05538 MTCO3P27-201ENST00000514397 196 ntBASIC1.44□□□□□ -2.18
HLA-DQB2P05538 RNA5SP61-201ENST00000516453 100 ntBASIC1.44□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms