Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC1.93□□□□□ -2.1
HLA-DPB1P04440 AL391813.1-201ENST00000603098 260 ntBASIC1.93□□□□□ -2.1
HLA-DPB1P04440 AC008121.1-201ENST00000603244 268 ntBASIC1.93□□□□□ -2.1
HLA-DPB1P04440 MIR6132-201ENST00000622083 109 ntBASIC1.93□□□□□ -2.1
HLA-DPB1P04440 AC023510.2-201ENST00000622162 746 ntBASIC1.93□□□□□ -2.1
HLA-DPB1P04440 AC006927.3-201ENST00000638789 384 ntBASIC1.93□□□□□ -2.1
HLA-DPB1P04440 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC1.93□□□□□ -2.1
HLA-DPB1P04440 AC093536.2-201ENST00000565257 1406 ntBASIC1.92□□□□□ -2.1
HLA-DPB1P04440 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
HLA-DPB1P04440 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
HLA-DPB1P04440 RNU5E-6P-201ENST00000365574 115 ntBASIC1.92□□□□□ -2.1
HLA-DPB1P04440 MIR221-201ENST00000385135 110 ntBASIC1.92□□□□□ -2.1
HLA-DPB1P04440 TAS2R15P-201ENST00000390674 928 ntBASIC1.92□□□□□ -2.1
HLA-DPB1P04440 RPS12P24-201ENST00000412619 387 ntBASIC1.92□□□□□ -2.1
HLA-DPB1P04440 OR51A5P-201ENST00000415429 942 ntBASIC1.92□□□□□ -2.1
HLA-DPB1P04440 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC1.92□□□□□ -2.1
HLA-DPB1P04440 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC1.92□□□□□ -2.1
HLA-DPB1P04440 SUMO1P4-201ENST00000429430 302 ntBASIC1.92□□□□□ -2.1
HLA-DPB1P04440 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC1.92□□□□□ -2.1
HLA-DPB1P04440 UBE2D3P1-201ENST00000436669 444 ntBASIC1.92□□□□□ -2.1
HLA-DPB1P04440 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC1.92□□□□□ -2.1
HLA-DPB1P04440 HMGB3P12-201ENST00000438745 556 ntBASIC1.92□□□□□ -2.1
HLA-DPB1P04440 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC1.92□□□□□ -2.1
HLA-DPB1P04440 AC233279.1-201ENST00000455300 423 ntBASIC1.92□□□□□ -2.1
HLA-DPB1P04440 RPL37P6-201ENST00000460682 294 ntBASIC1.92□□□□□ -2.1
HLA-DPB1P04440 AC008716.1-201ENST00000511084 513 ntBASIC1.92□□□□□ -2.1
HLA-DPB1P04440 RNA5SP200-201ENST00000516360 103 ntBASIC1.92□□□□□ -2.1
HLA-DPB1P04440 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC1.92□□□□□ -2.1
HLA-DPB1P04440 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC1.92□□□□□ -2.1
HLA-DPB1P04440 AP003122.4-201ENST00000530980 758 ntBASIC1.92□□□□□ -2.1
HLA-DPB1P04440 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC1.92□□□□□ -2.1
HLA-DPB1P04440 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC1.92□□□□□ -2.1
HLA-DPB1P04440 AC009163.5-201ENST00000575421 637 ntBASIC1.92□□□□□ -2.1
HLA-DPB1P04440 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC1.92□□□□□ -2.1
HLA-DPB1P04440 AC002984.1-201ENST00000591692 448 ntBASIC1.92□□□□□ -2.1
HLA-DPB1P04440 AL356280.1-201ENST00000603614 379 ntBASIC1.92□□□□□ -2.1
HLA-DPB1P04440 AC121334.2-201ENST00000605387 271 ntBASIC1.92□□□□□ -2.1
HLA-DPB1P04440 AC130324.3-201ENST00000614165 542 ntBASIC1.92□□□□□ -2.1
HLA-DPB1P04440 AC027807.2-201ENST00000616099 408 ntBASIC1.92□□□□□ -2.1
HLA-DPB1P04440 AC131159.1-201ENST00000621854 213 ntBASIC1.92□□□□□ -2.1
HLA-DPB1P04440 MIR3199-2-201ENST00000636243 86 ntBASIC1.92□□□□□ -2.1
HLA-DPB1P04440 Z99571.1-201ENST00000636677 394 ntBASIC1.92□□□□□ -2.1
HLA-DPB1P04440 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC1.92□□□□□ -2.1
HLA-DPB1P04440 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
HLA-DPB1P04440 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC1.92□□□□□ -2.1
HLA-DPB1P04440 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC1.91□□□□□ -2.1
HLA-DPB1P04440 ADAM3A-203ENST00000461344 2157 ntBASIC1.91□□□□□ -2.1
HLA-DPB1P04440 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC1.91□□□□□ -2.1
HLA-DPB1P04440 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC1.91□□□□□ -2.1
HLA-DPB1P04440 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC1.91□□□□□ -2.1
HLA-DPB1P04440 RNU4-1-201ENST00000363925 141 ntBASIC1.91□□□□□ -2.1
HLA-DPB1P04440 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC1.91□□□□□ -2.1
HLA-DPB1P04440 RNU6-817P-201ENST00000391083 104 ntBASIC1.91□□□□□ -2.1
HLA-DPB1P04440 SNORD115.1-201ENST00000391109 76 ntBASIC1.91□□□□□ -2.1
HLA-DPB1P04440 BTF3P7-201ENST00000407097 488 ntBASIC1.91□□□□□ -2.1
HLA-DPB1P04440 RNA5SP338-201ENST00000410495 85 ntBASIC1.91□□□□□ -2.1
HLA-DPB1P04440 RNU2-62P-201ENST00000410868 191 ntBASIC1.91□□□□□ -2.1
HLA-DPB1P04440 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC1.91□□□□□ -2.1
HLA-DPB1P04440 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC1.91□□□□□ -2.1
HLA-DPB1P04440 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC1.91□□□□□ -2.1
HLA-DPB1P04440 AL109913.1-201ENST00000421173 514 ntBASIC1.91□□□□□ -2.1
HLA-DPB1P04440 AC007283.2-201ENST00000424739 197 ntBASIC1.91□□□□□ -2.1
HLA-DPB1P04440 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC1.91□□□□□ -2.1
HLA-DPB1P04440 SRIP2-201ENST00000428470 166 ntBASIC1.91□□□□□ -2.1
HLA-DPB1P04440 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC1.91□□□□□ -2.1
HLA-DPB1P04440 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC1.91□□□□□ -2.1
HLA-DPB1P04440 OSTCP8-201ENST00000445117 448 ntBASIC1.91□□□□□ -2.1
HLA-DPB1P04440 MTATP6P7-201ENST00000453315 681 ntBASIC1.91□□□□□ -2.1
HLA-DPB1P04440 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC1.91□□□□□ -2.1
HLA-DPB1P04440 RNU7-125P-201ENST00000458760 62 ntBASIC1.91□□□□□ -2.1
HLA-DPB1P04440 RPL39P36-201ENST00000490784 156 ntBASIC1.91□□□□□ -2.1
HLA-DPB1P04440 AC112204.1-201ENST00000502591 103 ntBASIC1.91□□□□□ -2.1
HLA-DPB1P04440 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC1.91□□□□□ -2.1
HLA-DPB1P04440 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC1.91□□□□□ -2.1
HLA-DPB1P04440 RNU6-1092P-201ENST00000516955 87 ntBASIC1.91□□□□□ -2.1
HLA-DPB1P04440 AC084851.1-201ENST00000529105 249 ntBASIC1.91□□□□□ -2.1
HLA-DPB1P04440 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC1.91□□□□□ -2.1
HLA-DPB1P04440 MIR4658-201ENST00000584344 65 ntBASIC1.91□□□□□ -2.1
HLA-DPB1P04440 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC1.91□□□□□ -2.1
HLA-DPB1P04440 AC009314.1-201ENST00000603871 304 ntBASIC1.91□□□□□ -2.1
HLA-DPB1P04440 AC091152.3-201ENST00000604227 325 ntBASIC1.91□□□□□ -2.1
HLA-DPB1P04440 AC135507.1-201ENST00000607214 561 ntBASIC1.91□□□□□ -2.1
HLA-DPB1P04440 MIR7844-201ENST00000616161 122 ntBASIC1.91□□□□□ -2.1
HLA-DPB1P04440 AC092140.2-201ENST00000618027 521 ntBASIC1.91□□□□□ -2.1
HLA-DPB1P04440 DUXAP9-208ENST00000622815 614 ntBASIC1.91□□□□□ -2.1
HLA-DPB1P04440 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC1.91□□□□□ -2.1
HLA-DPB1P04440 MTND5P42-201ENST00000637720 498 ntBASIC1.91□□□□□ -2.1
HLA-DPB1P04440 MTND5P6-201ENST00000422338 1798 ntBASIC1.9□□□□□ -2.1
HLA-DPB1P04440 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC1.9□□□□□ -2.1
HLA-DPB1P04440 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.9□□□□□ -2.1
HLA-DPB1P04440 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
HLA-DPB1P04440 MTND4P35-201ENST00000604257 1375 ntBASIC1.9□□□□□ -2.11
HLA-DPB1P04440 Y_RNA.534-201ENST00000384599 112 ntBASIC1.9□□□□□ -2.11
HLA-DPB1P04440 RNU6-220P-201ENST00000390919 107 ntBASIC1.9□□□□□ -2.11
HLA-DPB1P04440 Y_RNA.608-201ENST00000410647 95 ntBASIC1.9□□□□□ -2.11
HLA-DPB1P04440 RNA5SP508-201ENST00000411327 119 ntBASIC1.9□□□□□ -2.11
HLA-DPB1P04440 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.9□□□□□ -2.11
HLA-DPB1P04440 SEPT2P1-201ENST00000419651 180 ntBASIC1.9□□□□□ -2.11
HLA-DPB1P04440 AL161651.1-201ENST00000440882 223 ntBASIC1.9□□□□□ -2.11
HLA-DPB1P04440 MTND1P12-201ENST00000455231 147 ntBASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 137 ms