Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC1.58□□□□□ -2.16
APOEP02649 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC1.58□□□□□ -2.16
APOEP02649 AC103987.3-201ENST00000582071 292 ntBASIC1.58□□□□□ -2.16
APOEP02649 AC069304.2-201ENST00000605154 435 ntBASIC1.58□□□□□ -2.16
APOEP02649 AF129408.1-201ENST00000608767 431 ntBASIC1.58□□□□□ -2.16
APOEP02649 AC011939.3-201ENST00000613686 466 ntBASIC1.58□□□□□ -2.16
APOEP02649 AL357080.1-201ENST00000617394 239 ntBASIC1.58□□□□□ -2.16
APOEP02649 AL118508.4-201ENST00000624142 1176 ntBASIC1.58□□□□□ -2.16
APOEP02649 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
APOEP02649 Y_RNA.140-201ENST00000363474 103 ntBASIC1.57□□□□□ -2.16
APOEP02649 RNU6-60P-201ENST00000364792 103 ntBASIC1.57□□□□□ -2.16
APOEP02649 SNORA25B-201ENST00000365507 128 ntBASIC1.57□□□□□ -2.16
APOEP02649 RNU6-207P-201ENST00000384137 107 ntBASIC1.57□□□□□ -2.16
APOEP02649 U8.10-201ENST00000384260 133 ntBASIC1.57□□□□□ -2.16
APOEP02649 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
APOEP02649 SNORA17.3-201ENST00000391159 129 ntBASIC1.57□□□□□ -2.16
APOEP02649 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
APOEP02649 AL590084.2-201ENST00000401481 382 ntBASIC1.57□□□□□ -2.16
APOEP02649 AL139397.2-201ENST00000404529 772 ntBASIC1.57□□□□□ -2.16
APOEP02649 MIR1323-201ENST00000408090 73 ntBASIC1.57□□□□□ -2.16
APOEP02649 RNU6-955P-201ENST00000410497 104 ntBASIC1.57□□□□□ -2.16
APOEP02649 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC1.57□□□□□ -2.16
APOEP02649 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC1.57□□□□□ -2.16
APOEP02649 AC092634.2-201ENST00000428146 1010 ntBASIC1.57□□□□□ -2.16
APOEP02649 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC1.57□□□□□ -2.16
APOEP02649 MTCO1P3-201ENST00000429327 192 ntBASIC1.57□□□□□ -2.16
APOEP02649 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC1.57□□□□□ -2.16
APOEP02649 AC013267.1-201ENST00000458227 267 ntBASIC1.57□□□□□ -2.16
APOEP02649 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
APOEP02649 AC023790.1-201ENST00000482174 347 ntBASIC1.57□□□□□ -2.16
APOEP02649 AC021382.1-201ENST00000483523 359 ntBASIC1.57□□□□□ -2.16
APOEP02649 RPL22P13-201ENST00000493291 347 ntBASIC1.57□□□□□ -2.16
APOEP02649 AC008628.1-201ENST00000508663 265 ntBASIC1.57□□□□□ -2.16
APOEP02649 MTND5P13-201ENST00000513046 1079 ntBASIC1.57□□□□□ -2.16
APOEP02649 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC1.57□□□□□ -2.16
APOEP02649 RNU6-927P-201ENST00000516199 100 ntBASIC1.57□□□□□ -2.16
APOEP02649 Y_RNA.675-201ENST00000516389 149 ntBASIC1.57□□□□□ -2.16
APOEP02649 AL354943.1-201ENST00000572103 781 ntBASIC1.57□□□□□ -2.16
APOEP02649 MIR4303-201ENST00000581299 66 ntBASIC1.57□□□□□ -2.16
APOEP02649 BBIP1P1-201ENST00000602999 279 ntBASIC1.57□□□□□ -2.16
APOEP02649 DUSP12P1-201ENST00000612874 516 ntBASIC1.57□□□□□ -2.16
APOEP02649 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
APOEP02649 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC1.57□□□□□ -2.16
APOEP02649 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
APOEP02649 RNU6-1167P-201ENST00000363227 94 ntBASIC1.56□□□□□ -2.16
APOEP02649 RNU1-42P-201ENST00000364033 160 ntBASIC1.56□□□□□ -2.16
APOEP02649 RNA5SP240-201ENST00000365355 128 ntBASIC1.56□□□□□ -2.16
APOEP02649 MIR320A-201ENST00000385302 82 ntBASIC1.56□□□□□ -2.16
APOEP02649 MIR1304-201ENST00000408243 91 ntBASIC1.56□□□□□ -2.16
APOEP02649 AL445669.1-201ENST00000426743 755 ntBASIC1.56□□□□□ -2.16
APOEP02649 MTND2P20-201ENST00000440805 661 ntBASIC1.56□□□□□ -2.16
APOEP02649 AL161788.1-201ENST00000441805 169 ntBASIC1.56□□□□□ -2.16
APOEP02649 AC011005.2-201ENST00000487324 359 ntBASIC1.56□□□□□ -2.16
APOEP02649 AC018868.1-201ENST00000491307 315 ntBASIC1.56□□□□□ -2.16
APOEP02649 RPS15AP36-201ENST00000492022 382 ntBASIC1.56□□□□□ -2.16
APOEP02649 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC1.56□□□□□ -2.16
APOEP02649 RNA5SP458-201ENST00000516188 119 ntBASIC1.56□□□□□ -2.16
APOEP02649 RNU6-390P-201ENST00000516259 103 ntBASIC1.56□□□□□ -2.16
APOEP02649 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC1.56□□□□□ -2.16
APOEP02649 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.56□□□□□ -2.16
APOEP02649 SLC2A13P1-201ENST00000531560 322 ntBASIC1.56□□□□□ -2.16
APOEP02649 HIGD1AP17-201ENST00000554576 276 ntBASIC1.56□□□□□ -2.16
APOEP02649 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC1.56□□□□□ -2.16
APOEP02649 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC1.56□□□□□ -2.16
APOEP02649 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC1.56□□□□□ -2.16
APOEP02649 AC015720.1-201ENST00000565251 277 ntBASIC1.56□□□□□ -2.16
APOEP02649 AC012213.3-201ENST00000577199 777 ntBASIC1.56□□□□□ -2.16
APOEP02649 AL645939.4-201ENST00000604495 135 ntBASIC1.56□□□□□ -2.16
APOEP02649 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.56□□□□□ -2.16
APOEP02649 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.56□□□□□ -2.16
APOEP02649 CDR1-202ENST00000625883 1485 ntBASIC1.56□□□□□ -2.16
APOEP02649 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
APOEP02649 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
APOEP02649 SNORA8-201ENST00000384574 139 ntBASIC1.55□□□□□ -2.16
APOEP02649 AL591034.2-201ENST00000402839 359 ntBASIC1.55□□□□□ -2.16
APOEP02649 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
APOEP02649 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.55□□□□□ -2.16
APOEP02649 AC108667.1-201ENST00000428618 249 ntBASIC1.55□□□□□ -2.16
APOEP02649 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC1.55□□□□□ -2.16
APOEP02649 AC092001.1-201ENST00000453012 261 ntBASIC1.55□□□□□ -2.16
APOEP02649 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC1.55□□□□□ -2.16
APOEP02649 RNU6-583P-201ENST00000516012 92 ntBASIC1.55□□□□□ -2.16
APOEP02649 MTCO3P15-201ENST00000526563 574 ntBASIC1.55□□□□□ -2.16
APOEP02649 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC1.55□□□□□ -2.16
APOEP02649 OR6C7P-201ENST00000547875 934 ntBASIC1.55□□□□□ -2.16
APOEP02649 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC1.55□□□□□ -2.16
APOEP02649 CYB5AP5-201ENST00000549779 389 ntBASIC1.55□□□□□ -2.16
APOEP02649 AP000942.3-201ENST00000603702 160 ntBASIC1.55□□□□□ -2.16
APOEP02649 DPPA3P3-201ENST00000603842 430 ntBASIC1.55□□□□□ -2.16
APOEP02649 AL161798.1-201ENST00000604630 131 ntBASIC1.55□□□□□ -2.16
APOEP02649 AC009237.15-201ENST00000610252 501 ntBASIC1.55□□□□□ -2.16
APOEP02649 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.54□□□□□ -2.16
APOEP02649 MIR934-201ENST00000401241 83 ntBASIC1.54□□□□□ -2.16
APOEP02649 AL033519.2-201ENST00000403958 392 ntBASIC1.54□□□□□ -2.16
APOEP02649 MTND3P20-201ENST00000407663 186 ntBASIC1.54□□□□□ -2.16
APOEP02649 AC078974.1-201ENST00000411597 223 ntBASIC1.54□□□□□ -2.16
APOEP02649 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC1.54□□□□□ -2.16
APOEP02649 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC1.54□□□□□ -2.16
APOEP02649 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC1.54□□□□□ -2.16
APOEP02649 RPL36AP53-201ENST00000432891 316 ntBASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms