Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 AC114737.2-201ENST00000421583 173 ntBASIC0.5□□□□□ -2.33
SPTA1P02549 AC246680.2-201ENST00000422106 389 ntBASIC0.5□□□□□ -2.33
SPTA1P02549 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC0.5□□□□□ -2.33
SPTA1P02549 HSPE1P21-201ENST00000438283 308 ntBASIC0.5□□□□□ -2.33
SPTA1P02549 SNRPEP7-201ENST00000438350 220 ntBASIC0.5□□□□□ -2.33
SPTA1P02549 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC0.5□□□□□ -2.33
SPTA1P02549 RPL39P29-201ENST00000447779 157 ntBASIC0.5□□□□□ -2.33
SPTA1P02549 SNRPGP6-201ENST00000451124 220 ntBASIC0.5□□□□□ -2.33
SPTA1P02549 AC092757.1-201ENST00000467293 467 ntBASIC0.5□□□□□ -2.33
SPTA1P02549 AC015908.1-201ENST00000478739 476 ntBASIC0.5□□□□□ -2.33
SPTA1P02549 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC0.5□□□□□ -2.33
SPTA1P02549 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC0.5□□□□□ -2.33
SPTA1P02549 AF213884.2-201ENST00000510417 903 ntBASIC0.5□□□□□ -2.33
SPTA1P02549 SCARNA11.3-201ENST00000517276 130 ntBASIC0.5□□□□□ -2.33
SPTA1P02549 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC0.5□□□□□ -2.33
SPTA1P02549 MTND2P26-201ENST00000528255 1029 ntBASIC0.5□□□□□ -2.33
SPTA1P02549 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC0.5□□□□□ -2.33
SPTA1P02549 MIR4514-201ENST00000581410 57 ntBASIC0.5□□□□□ -2.33
SPTA1P02549 AL355812.1-201ENST00000603215 216 ntBASIC0.5□□□□□ -2.33
SPTA1P02549 RPL21P136-201ENST00000605378 396 ntBASIC0.5□□□□□ -2.33
SPTA1P02549 AP000238.1-201ENST00000608759 426 ntBASIC0.5□□□□□ -2.33
SPTA1P02549 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
SPTA1P02549 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC0.5□□□□□ -2.33
SPTA1P02549 MIR6130-201ENST00000619419 109 ntBASIC0.5□□□□□ -2.33
SPTA1P02549 AP003476.1-201ENST00000623984 516 ntBASIC0.5□□□□□ -2.33
SPTA1P02549 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC0.5□□□□□ -2.33
SPTA1P02549 AC139453.3-201ENST00000493276 369 ntBASIC0.5□□□□□ -2.33
SPTA1P02549 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC0.5□□□□□ -2.33
SPTA1P02549 IGLVI-20-201ENST00000519296 130 ntBASIC0.5□□□□□ -2.33
SPTA1P02549 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC0.5□□□□□ -2.33
SPTA1P02549 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
SPTA1P02549 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC0.5□□□□□ -2.33
SPTA1P02549 MIR3198-2-201ENST00000577868 80 ntBASIC0.5□□□□□ -2.33
SPTA1P02549 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC0.5□□□□□ -2.33
SPTA1P02549 AL360181.4-201ENST00000621752 134 ntBASIC0.5□□□□□ -2.33
SPTA1P02549 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
SPTA1P02549 AC016716.1-201ENST00000265882 708 ntBASIC0.49□□□□□ -2.33
SPTA1P02549 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC0.49□□□□□ -2.33
SPTA1P02549 RNA5SP368-201ENST00000364298 116 ntBASIC0.49□□□□□ -2.33
SPTA1P02549 RNU6-1328P-201ENST00000410938 106 ntBASIC0.49□□□□□ -2.33
SPTA1P02549 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC0.49□□□□□ -2.33
SPTA1P02549 SFR1P2-201ENST00000421841 730 ntBASIC0.49□□□□□ -2.33
SPTA1P02549 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC0.49□□□□□ -2.33
SPTA1P02549 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC0.49□□□□□ -2.33
SPTA1P02549 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC0.49□□□□□ -2.33
SPTA1P02549 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC0.49□□□□□ -2.33
SPTA1P02549 UBL5P1-201ENST00000507979 193 ntBASIC0.49□□□□□ -2.33
SPTA1P02549 SNORA62.5-201ENST00000516634 120 ntBASIC0.49□□□□□ -2.33
SPTA1P02549 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC0.49□□□□□ -2.33
SPTA1P02549 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC0.49□□□□□ -2.33
SPTA1P02549 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC0.49□□□□□ -2.33
SPTA1P02549 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC0.49□□□□□ -2.33
SPTA1P02549 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC0.49□□□□□ -2.33
SPTA1P02549 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC0.49□□□□□ -2.33
SPTA1P02549 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC0.49□□□□□ -2.33
SPTA1P02549 DUSP12P1-201ENST00000612874 516 ntBASIC0.49□□□□□ -2.33
SPTA1P02549 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC0.49□□□□□ -2.33
SPTA1P02549 MTATP6P31-201ENST00000406985 692 ntBASIC0.49□□□□□ -2.33
SPTA1P02549 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.49□□□□□ -2.33
SPTA1P02549 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC0.49□□□□□ -2.33
SPTA1P02549 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC0.49□□□□□ -2.33
SPTA1P02549 RNU6-322P-201ENST00000516010 103 ntBASIC0.49□□□□□ -2.33
SPTA1P02549 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC0.49□□□□□ -2.33
SPTA1P02549 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC0.49□□□□□ -2.33
SPTA1P02549 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC0.49□□□□□ -2.33
SPTA1P02549 MIR5571-201ENST00000577998 113 ntBASIC0.49□□□□□ -2.33
SPTA1P02549 ZNF92P3-201ENST00000596594 954 ntBASIC0.49□□□□□ -2.33
SPTA1P02549 AL009028.1-201ENST00000604895 802 ntBASIC0.49□□□□□ -2.33
SPTA1P02549 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.49□□□□□ -2.33
SPTA1P02549 ZNF29P-201ENST00000225587 168 ntBASIC0.48□□□□□ -2.33
SPTA1P02549 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC0.48□□□□□ -2.33
SPTA1P02549 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
SPTA1P02549 MTCO3P4-201ENST00000419236 787 ntBASIC0.48□□□□□ -2.33
SPTA1P02549 MRPL35P3-201ENST00000421557 364 ntBASIC0.48□□□□□ -2.33
SPTA1P02549 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC0.48□□□□□ -2.33
SPTA1P02549 AP001025.1-201ENST00000486139 332 ntBASIC0.48□□□□□ -2.33
SPTA1P02549 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC0.48□□□□□ -2.33
SPTA1P02549 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC0.48□□□□□ -2.33
SPTA1P02549 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC0.48□□□□□ -2.33
SPTA1P02549 AL136313.1-201ENST00000624804 202 ntBASIC0.48□□□□□ -2.33
SPTA1P02549 AP003485.1-201ENST00000625093 753 ntBASIC0.48□□□□□ -2.33
SPTA1P02549 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
SPTA1P02549 CR848007.1-201ENST00000442354 1699 ntBASIC0.48□□□□□ -2.33
SPTA1P02549 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
SPTA1P02549 Y_RNA.185-201ENST00000363894 100 ntBASIC0.48□□□□□ -2.33
SPTA1P02549 SNORA68.1-201ENST00000364537 132 ntBASIC0.48□□□□□ -2.33
SPTA1P02549 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.48□□□□□ -2.33
SPTA1P02549 AL356421.1-201ENST00000403255 413 ntBASIC0.48□□□□□ -2.33
SPTA1P02549 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC0.48□□□□□ -2.33
SPTA1P02549 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC0.48□□□□□ -2.33
SPTA1P02549 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.48□□□□□ -2.33
SPTA1P02549 snoU109.1-201ENST00000459339 135 ntBASIC0.48□□□□□ -2.33
SPTA1P02549 OR2A41P-201ENST00000473586 105 ntBASIC0.48□□□□□ -2.33
SPTA1P02549 AC008834.1-201ENST00000511612 175 ntBASIC0.48□□□□□ -2.33
SPTA1P02549 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC0.48□□□□□ -2.33
SPTA1P02549 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC0.48□□□□□ -2.33
SPTA1P02549 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC0.48□□□□□ -2.33
SPTA1P02549 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC0.48□□□□□ -2.33
SPTA1P02549 AP001485.1-201ENST00000604799 199 ntBASIC0.48□□□□□ -2.33
SPTA1P02549 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC0.48□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms