Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.26□□□□□ -2.21
COL1A1P02452 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC1.26□□□□□ -2.21
COL1A1P02452 AC123912.5-201ENST00000605470 343 ntBASIC1.26□□□□□ -2.21
COL1A1P02452 U4atac.1-201ENST00000618345 95 ntBASIC1.26□□□□□ -2.21
COL1A1P02452 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC1.26□□□□□ -2.21
COL1A1P02452 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC1.26□□□□□ -2.21
COL1A1P02452 RNU4-38P-201ENST00000364472 129 ntBASIC1.25□□□□□ -2.21
COL1A1P02452 RNU4-42P-201ENST00000364738 142 ntBASIC1.25□□□□□ -2.21
COL1A1P02452 MIR513A1-201ENST00000385138 129 ntBASIC1.25□□□□□ -2.21
COL1A1P02452 U6atac.2-201ENST00000408644 118 ntBASIC1.25□□□□□ -2.21
COL1A1P02452 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC1.25□□□□□ -2.21
COL1A1P02452 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC1.25□□□□□ -2.21
COL1A1P02452 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC1.25□□□□□ -2.21
COL1A1P02452 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC1.25□□□□□ -2.21
COL1A1P02452 TRBV26OR9-2-201ENST00000432077 293 ntBASIC1.25□□□□□ -2.21
COL1A1P02452 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC1.25□□□□□ -2.21
COL1A1P02452 RPS15AP5-201ENST00000436276 388 ntBASIC1.25□□□□□ -2.21
COL1A1P02452 AL357134.1-201ENST00000445848 426 ntBASIC1.25□□□□□ -2.21
COL1A1P02452 AC022483.1-201ENST00000514020 567 ntBASIC1.25□□□□□ -2.21
COL1A1P02452 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC1.25□□□□□ -2.21
COL1A1P02452 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC1.25□□□□□ -2.21
COL1A1P02452 AP005639.2-201ENST00000527592 928 ntBASIC1.25□□□□□ -2.21
COL1A1P02452 AC124947.2-202ENST00000552735 133 ntBASIC1.25□□□□□ -2.21
COL1A1P02452 AC007151.1-201ENST00000572774 483 ntBASIC1.25□□□□□ -2.21
COL1A1P02452 AC105245.1-201ENST00000581934 244 ntBASIC1.25□□□□□ -2.21
COL1A1P02452 AL445493.3-201ENST00000619568 477 ntBASIC1.25□□□□□ -2.21
COL1A1P02452 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
COL1A1P02452 MIR532-201ENST00000385025 91 ntBASIC1.24□□□□□ -2.21
COL1A1P02452 AL158823.1-201ENST00000418441 478 ntBASIC1.24□□□□□ -2.21
COL1A1P02452 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC1.24□□□□□ -2.21
COL1A1P02452 MTND5P8-201ENST00000449817 1083 ntBASIC1.24□□□□□ -2.21
COL1A1P02452 AC108059.3-201ENST00000456388 214 ntBASIC1.24□□□□□ -2.21
COL1A1P02452 AC092989.1-201ENST00000481235 277 ntBASIC1.24□□□□□ -2.21
COL1A1P02452 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC1.24□□□□□ -2.21
COL1A1P02452 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
COL1A1P02452 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
COL1A1P02452 RNU6-416P-201ENST00000516265 103 ntBASIC1.24□□□□□ -2.21
COL1A1P02452 AC103833.1-201ENST00000517442 172 ntBASIC1.24□□□□□ -2.21
COL1A1P02452 AC022880.1-201ENST00000534017 973 ntBASIC1.24□□□□□ -2.21
COL1A1P02452 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC1.24□□□□□ -2.21
COL1A1P02452 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC1.24□□□□□ -2.21
COL1A1P02452 VN1R107P-201ENST00000601784 209 ntBASIC1.24□□□□□ -2.21
COL1A1P02452 AL020997.3-201ENST00000602843 359 ntBASIC1.24□□□□□ -2.21
COL1A1P02452 MTND4LP5-201ENST00000605152 292 ntBASIC1.24□□□□□ -2.21
COL1A1P02452 AC007349.4-201ENST00000608114 532 ntBASIC1.24□□□□□ -2.21
COL1A1P02452 AC092140.2-201ENST00000618027 521 ntBASIC1.24□□□□□ -2.21
COL1A1P02452 AC109454.4-201ENST00000623411 649 ntBASIC1.24□□□□□ -2.21
COL1A1P02452 AC022513.1-201ENST00000624512 117 ntBASIC1.24□□□□□ -2.21
COL1A1P02452 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.24□□□□□ -2.21
COL1A1P02452 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
COL1A1P02452 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
COL1A1P02452 RNU6-1005P-201ENST00000384519 107 ntBASIC1.24□□□□□ -2.21
COL1A1P02452 MTCO3P46-201ENST00000425787 232 ntBASIC1.24□□□□□ -2.21
COL1A1P02452 MTND4LP14-201ENST00000429447 288 ntBASIC1.24□□□□□ -2.21
COL1A1P02452 AC002542.1-201ENST00000440683 193 ntBASIC1.24□□□□□ -2.21
COL1A1P02452 AL691517.1-201ENST00000440833 1235 ntBASIC1.24□□□□□ -2.21
COL1A1P02452 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC1.24□□□□□ -2.21
COL1A1P02452 GDI2P2-201ENST00000445131 608 ntBASIC1.24□□□□□ -2.21
COL1A1P02452 AL929288.2-201ENST00000446368 407 ntBASIC1.24□□□□□ -2.21
COL1A1P02452 MTND2P6-201ENST00000455337 1030 ntBASIC1.24□□□□□ -2.21
COL1A1P02452 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC1.24□□□□□ -2.21
COL1A1P02452 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC1.24□□□□□ -2.21
COL1A1P02452 SCARNA15.2-201ENST00000516409 127 ntBASIC1.24□□□□□ -2.21
COL1A1P02452 RNA5SP330-201ENST00000517096 96 ntBASIC1.24□□□□□ -2.21
COL1A1P02452 CBX3P7-201ENST00000532876 502 ntBASIC1.24□□□□□ -2.21
COL1A1P02452 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC1.24□□□□□ -2.21
COL1A1P02452 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
COL1A1P02452 AL163051.2-201ENST00000618976 735 ntBASIC1.24□□□□□ -2.21
COL1A1P02452 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC1.24□□□□□ -2.21
COL1A1P02452 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC1.24□□□□□ -2.21
COL1A1P02452 AC005832.2-201ENST00000538921 1430 ntBASIC1.23□□□□□ -2.21
COL1A1P02452 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
COL1A1P02452 RNA5SP212-201ENST00000391223 107 ntBASIC1.23□□□□□ -2.21
COL1A1P02452 TMSB4XP8-201ENST00000402089 135 ntBASIC1.23□□□□□ -2.21
COL1A1P02452 RNU2-49P-201ENST00000410666 184 ntBASIC1.23□□□□□ -2.21
COL1A1P02452 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC1.23□□□□□ -2.21
COL1A1P02452 TMSB4XP6-201ENST00000415187 135 ntBASIC1.23□□□□□ -2.21
COL1A1P02452 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC1.23□□□□□ -2.21
COL1A1P02452 TMSB4XP1-201ENST00000424567 135 ntBASIC1.23□□□□□ -2.21
COL1A1P02452 RPL31P54-201ENST00000429803 370 ntBASIC1.23□□□□□ -2.21
COL1A1P02452 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.23□□□□□ -2.21
COL1A1P02452 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.23□□□□□ -2.21
COL1A1P02452 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC1.23□□□□□ -2.21
COL1A1P02452 TPRKBP1-201ENST00000456243 481 ntBASIC1.23□□□□□ -2.21
COL1A1P02452 AC087884.1-201ENST00000469738 328 ntBASIC1.23□□□□□ -2.21
COL1A1P02452 LARP1BP2-201ENST00000486594 519 ntBASIC1.23□□□□□ -2.21
COL1A1P02452 RPS23P4-201ENST00000487908 423 ntBASIC1.23□□□□□ -2.21
COL1A1P02452 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.23□□□□□ -2.21
COL1A1P02452 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC1.23□□□□□ -2.21
COL1A1P02452 AC098591.2-201ENST00000510152 315 ntBASIC1.23□□□□□ -2.21
COL1A1P02452 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC1.23□□□□□ -2.21
COL1A1P02452 ARL2BPP5-201ENST00000523141 481 ntBASIC1.23□□□□□ -2.21
COL1A1P02452 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC1.23□□□□□ -2.21
COL1A1P02452 AP001269.3-201ENST00000588718 329 ntBASIC1.23□□□□□ -2.21
COL1A1P02452 AC008121.1-201ENST00000603244 268 ntBASIC1.23□□□□□ -2.21
COL1A1P02452 AC112191.3-201ENST00000604371 277 ntBASIC1.23□□□□□ -2.21
COL1A1P02452 AL020996.3-201ENST00000606617 222 ntBASIC1.23□□□□□ -2.21
COL1A1P02452 AC103810.8-201ENST00000607347 118 ntBASIC1.23□□□□□ -2.21
COL1A1P02452 MTND5P30-201ENST00000452896 1731 ntBASIC1.23□□□□□ -2.21
COL1A1P02452 AC010889.1-201ENST00000566193 2666 ntBASIC1.22□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms