Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC0.89□□□□□ -2.27
TNFP01375 MTND2P24-201ENST00000453434 806 ntBASIC0.89□□□□□ -2.27
TNFP01375 CYP2C59P-201ENST00000457790 269 ntBASIC0.89□□□□□ -2.27
TNFP01375 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC0.89□□□□□ -2.27
TNFP01375 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
TNFP01375 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC0.89□□□□□ -2.27
TNFP01375 HMSD-204ENST00000526932 162 ntTSL 3 BASIC0.89□□□□□ -2.27
TNFP01375 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC0.89□□□□□ -2.27
TNFP01375 MIR3973-201ENST00000579824 107 ntBASIC0.89□□□□□ -2.27
TNFP01375 MIR151B-201ENST00000584249 96 ntBASIC0.89□□□□□ -2.27
TNFP01375 AL671309.1-201ENST00000603750 544 ntBASIC0.89□□□□□ -2.27
TNFP01375 AC138473.1-201ENST00000605717 526 ntBASIC0.89□□□□□ -2.27
TNFP01375 BX322635.1-201ENST00000605804 496 ntBASIC0.89□□□□□ -2.27
TNFP01375 RMST_2.1-201ENST00000617263 136 ntBASIC0.89□□□□□ -2.27
TNFP01375 AP003400.6-201ENST00000624698 740 ntBASIC0.89□□□□□ -2.27
TNFP01375 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.88□□□□□ -2.27
TNFP01375 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC0.88□□□□□ -2.27
TNFP01375 MIR888-201ENST00000401186 77 ntBASIC0.88□□□□□ -2.27
TNFP01375 MIR548J-201ENST00000408833 112 ntBASIC0.88□□□□□ -2.27
TNFP01375 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC0.88□□□□□ -2.27
TNFP01375 AC008850.1-201ENST00000427546 362 ntBASIC0.88□□□□□ -2.27
TNFP01375 TRAPPC2P8-201ENST00000440676 396 ntBASIC0.88□□□□□ -2.27
TNFP01375 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.88□□□□□ -2.27
TNFP01375 TRAPPC2P3-201ENST00000443200 321 ntBASIC0.88□□□□□ -2.27
TNFP01375 SNRPFP3-201ENST00000457792 225 ntBASIC0.88□□□□□ -2.27
TNFP01375 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC0.88□□□□□ -2.27
TNFP01375 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC0.88□□□□□ -2.27
TNFP01375 HSPA8P13-201ENST00000523715 472 ntBASIC0.88□□□□□ -2.27
TNFP01375 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC0.88□□□□□ -2.27
TNFP01375 CR383656.7-201ENST00000548164 174 ntBASIC0.88□□□□□ -2.27
TNFP01375 AC103810.9-201ENST00000606688 112 ntBASIC0.88□□□□□ -2.27
TNFP01375 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC0.88□□□□□ -2.27
TNFP01375 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC0.88□□□□□ -2.27
TNFP01375 AC106730.3-201ENST00000624568 641 ntBASIC0.88□□□□□ -2.27
TNFP01375 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
TNFP01375 CBX3P1-201ENST00000325243 554 ntBASIC0.87□□□□□ -2.27
TNFP01375 SNORA25B-201ENST00000365507 128 ntBASIC0.87□□□□□ -2.27
TNFP01375 RNU6-741P-201ENST00000383889 107 ntBASIC0.87□□□□□ -2.27
TNFP01375 RNU6-140P-201ENST00000384566 108 ntBASIC0.87□□□□□ -2.27
TNFP01375 RNU11-5P-201ENST00000391216 129 ntBASIC0.87□□□□□ -2.27
TNFP01375 RNU2-47P-201ENST00000410649 186 ntBASIC0.87□□□□□ -2.27
TNFP01375 RNU2-15P-201ENST00000410692 191 ntBASIC0.87□□□□□ -2.27
TNFP01375 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC0.87□□□□□ -2.27
TNFP01375 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC0.87□□□□□ -2.27
TNFP01375 PNRC2P1-201ENST00000423940 420 ntBASIC0.87□□□□□ -2.27
TNFP01375 AL691517.1-201ENST00000440833 1235 ntBASIC0.87□□□□□ -2.27
TNFP01375 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC0.87□□□□□ -2.27
TNFP01375 AL022238.1-201ENST00000442557 355 ntBASIC0.87□□□□□ -2.27
TNFP01375 AC245517.4-201ENST00000448601 281 ntBASIC0.87□□□□□ -2.27
TNFP01375 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC0.87□□□□□ -2.27
TNFP01375 RNU6-491P-201ENST00000516099 110 ntBASIC0.87□□□□□ -2.27
TNFP01375 RNU6-1223P-201ENST00000517124 104 ntBASIC0.87□□□□□ -2.27
TNFP01375 AC019176.1-201ENST00000518519 225 ntBASIC0.87□□□□□ -2.27
TNFP01375 ZNF705CP-201ENST00000530515 889 ntBASIC0.87□□□□□ -2.27
TNFP01375 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC0.87□□□□□ -2.27
TNFP01375 AC016957.1-201ENST00000534895 309 ntBASIC0.87□□□□□ -2.27
TNFP01375 AC135279.1-201ENST00000543493 504 ntBASIC0.87□□□□□ -2.27
TNFP01375 HSPE1P4-201ENST00000550617 308 ntBASIC0.87□□□□□ -2.27
TNFP01375 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC0.87□□□□□ -2.27
TNFP01375 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC0.87□□□□□ -2.27
TNFP01375 AC079148.1-201ENST00000565944 819 ntBASIC0.87□□□□□ -2.27
TNFP01375 MIR4698-201ENST00000577795 80 ntBASIC0.87□□□□□ -2.27
TNFP01375 MTATP6P3-201ENST00000581686 676 ntBASIC0.87□□□□□ -2.27
TNFP01375 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC0.87□□□□□ -2.27
TNFP01375 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC0.87□□□□□ -2.27
TNFP01375 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC0.87□□□□□ -2.27
TNFP01375 MIR518D-201ENST00000385014 87 ntBASIC0.86□□□□□ -2.27
TNFP01375 AL139098.1-201ENST00000407291 389 ntBASIC0.86□□□□□ -2.27
TNFP01375 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.86□□□□□ -2.27
TNFP01375 RPL37P10-201ENST00000412884 288 ntBASIC0.86□□□□□ -2.27
TNFP01375 CYCSP33-201ENST00000414485 327 ntBASIC0.86□□□□□ -2.27
TNFP01375 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC0.86□□□□□ -2.27
TNFP01375 UBE2V1P4-201ENST00000425374 344 ntBASIC0.86□□□□□ -2.27
TNFP01375 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC0.86□□□□□ -2.27
TNFP01375 AC005908.1-201ENST00000468701 347 ntBASIC0.86□□□□□ -2.27
TNFP01375 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC0.86□□□□□ -2.27
TNFP01375 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC0.86□□□□□ -2.27
TNFP01375 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC0.86□□□□□ -2.27
TNFP01375 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC0.86□□□□□ -2.27
TNFP01375 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC0.86□□□□□ -2.27
TNFP01375 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC0.86□□□□□ -2.27
TNFP01375 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC0.86□□□□□ -2.27
TNFP01375 AL355802.3-201ENST00000607571 545 ntBASIC0.86□□□□□ -2.27
TNFP01375 FTX_3.1-201ENST00000610451 147 ntBASIC0.86□□□□□ -2.27
TNFP01375 uc_338.14-201ENST00000613162 166 ntBASIC0.86□□□□□ -2.27
TNFP01375 U1.36-201ENST00000620684 176 ntBASIC0.86□□□□□ -2.27
TNFP01375 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC0.86□□□□□ -2.27
TNFP01375 AC007490.1-201ENST00000624321 703 ntBASIC0.86□□□□□ -2.27
TNFP01375 AL512643.1-201ENST00000635735 524 ntBASIC0.86□□□□□ -2.27
TNFP01375 GS1-279B7.1-204ENST00000641809 378 ntBASIC0.86□□□□□ -2.27
TNFP01375 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC0.86□□□□□ -2.27
TNFP01375 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC0.85□□□□□ -2.27
TNFP01375 RNU1-78P-201ENST00000391248 165 ntBASIC0.85□□□□□ -2.27
TNFP01375 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
TNFP01375 ZNF92P1Y-201ENST00000415010 1191 ntBASIC0.85□□□□□ -2.27
TNFP01375 AC018630.2-202ENST00000422992 927 ntBASIC0.85□□□□□ -2.27
TNFP01375 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC0.85□□□□□ -2.27
TNFP01375 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC0.85□□□□□ -2.27
TNFP01375 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC0.85□□□□□ -2.27
TNFP01375 RPS4XP11-201ENST00000446897 772 ntBASIC0.85□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms