Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 RNU2-46P-201ENST00000517038 113 ntBASIC2.67□□□□□ -1.98
PDGFBP01127 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC2.67□□□□□ -1.98
PDGFBP01127 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.67□□□□□ -1.98
PDGFBP01127 RN7SKP299-201ENST00000606679 301 ntBASIC2.67□□□□□ -1.98
PDGFBP01127 MIR7515-201ENST00000637837 67 ntBASIC2.67□□□□□ -1.98
PDGFBP01127 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
PDGFBP01127 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.67□□□□□ -1.98
PDGFBP01127 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.67□□□□□ -1.98
PDGFBP01127 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.67□□□□□ -1.98
PDGFBP01127 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.67□□□□□ -1.98
PDGFBP01127 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.67□□□□□ -1.98
PDGFBP01127 AL161431.1-201ENST00000618966 4205 ntBASIC2.66□□□□□ -1.98
PDGFBP01127 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
PDGFBP01127 RNU5E-1-201ENST00000362477 120 ntBASIC2.66□□□□□ -1.98
PDGFBP01127 RNU1-35P-201ENST00000362782 153 ntBASIC2.66□□□□□ -1.98
PDGFBP01127 RNU6-288P-201ENST00000363690 104 ntBASIC2.66□□□□□ -1.98
PDGFBP01127 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
PDGFBP01127 RNU1-73P-201ENST00000383971 164 ntBASIC2.66□□□□□ -1.98
PDGFBP01127 RNU6-1083P-201ENST00000384022 107 ntBASIC2.66□□□□□ -1.98
PDGFBP01127 RPS3AP3-201ENST00000411933 242 ntBASIC2.66□□□□□ -1.98
PDGFBP01127 AL135786.1-201ENST00000415892 214 ntBASIC2.66□□□□□ -1.98
PDGFBP01127 ZNF90P2-204ENST00000419323 1075 ntBASIC2.66□□□□□ -1.98
PDGFBP01127 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC2.66□□□□□ -1.98
PDGFBP01127 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.66□□□□□ -1.98
PDGFBP01127 AC010153.1-201ENST00000432862 727 ntBASIC2.66□□□□□ -1.98
PDGFBP01127 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC2.66□□□□□ -1.98
PDGFBP01127 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC2.66□□□□□ -1.98
PDGFBP01127 USP9YP29-201ENST00000445112 563 ntBASIC2.66□□□□□ -1.98
PDGFBP01127 AL360221.1-201ENST00000445989 335 ntBASIC2.66□□□□□ -1.98
PDGFBP01127 DPPA3P1-201ENST00000448050 469 ntBASIC2.66□□□□□ -1.98
PDGFBP01127 RNU6-956P-201ENST00000458868 103 ntBASIC2.66□□□□□ -1.98
PDGFBP01127 AC003982.1-202ENST00000469928 248 ntBASIC2.66□□□□□ -1.98
PDGFBP01127 AC107626.1-201ENST00000471084 183 ntBASIC2.66□□□□□ -1.98
PDGFBP01127 RPS27AP10-201ENST00000496103 208 ntBASIC2.66□□□□□ -1.98
PDGFBP01127 CKS1BP2-201ENST00000497342 240 ntBASIC2.66□□□□□ -1.98
PDGFBP01127 RNA5SP337-201ENST00000517007 109 ntBASIC2.66□□□□□ -1.98
PDGFBP01127 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC2.66□□□□□ -1.98
PDGFBP01127 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.66□□□□□ -1.98
PDGFBP01127 AP005136.1-201ENST00000579765 429 ntBASIC2.66□□□□□ -1.98
PDGFBP01127 AC090616.3-201ENST00000582184 217 ntBASIC2.66□□□□□ -1.98
PDGFBP01127 MIR4293-201ENST00000584305 78 ntBASIC2.66□□□□□ -1.98
PDGFBP01127 AL161798.1-201ENST00000604630 131 ntBASIC2.66□□□□□ -1.98
PDGFBP01127 AL627309.6-201ENST00000606857 840 ntBASIC2.66□□□□□ -1.98
PDGFBP01127 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
PDGFBP01127 DUSP12P1-201ENST00000612874 516 ntBASIC2.66□□□□□ -1.98
PDGFBP01127 AC025594.3-201ENST00000613068 790 ntBASIC2.66□□□□□ -1.98
PDGFBP01127 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
PDGFBP01127 MIR3199-2-201ENST00000636243 86 ntBASIC2.66□□□□□ -1.98
PDGFBP01127 LRRC77P-213ENST00000637727 880 ntBASIC2.66□□□□□ -1.98
PDGFBP01127 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.66□□□□□ -1.98
PDGFBP01127 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.66□□□□□ -1.98
PDGFBP01127 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.66□□□□□ -1.98
PDGFBP01127 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.66□□□□□ -1.98
PDGFBP01127 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.65□□□□□ -1.98
PDGFBP01127 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
PDGFBP01127 RNU6-188P-201ENST00000364207 107 ntBASIC2.65□□□□□ -1.99
PDGFBP01127 Y_RNA.359-201ENST00000365498 102 ntBASIC2.65□□□□□ -1.99
PDGFBP01127 RNU6-297P-201ENST00000384636 107 ntBASIC2.65□□□□□ -1.99
PDGFBP01127 NDUFS5P1-201ENST00000405668 289 ntBASIC2.65□□□□□ -1.99
PDGFBP01127 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
PDGFBP01127 RNU2-62P-201ENST00000410868 191 ntBASIC2.65□□□□□ -1.99
PDGFBP01127 ELOCP4-201ENST00000420090 333 ntBASIC2.65□□□□□ -1.99
PDGFBP01127 DPH3P2-201ENST00000422618 250 ntBASIC2.65□□□□□ -1.99
PDGFBP01127 AC104651.1-201ENST00000427559 735 ntBASIC2.65□□□□□ -1.99
PDGFBP01127 GPM6BP2-201ENST00000432046 144 ntBASIC2.65□□□□□ -1.99
PDGFBP01127 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.65□□□□□ -1.99
PDGFBP01127 AC104850.1-201ENST00000435940 476 ntBASIC2.65□□□□□ -1.99
PDGFBP01127 MTND4P32-201ENST00000437189 1237 ntBASIC2.65□□□□□ -1.99
PDGFBP01127 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC2.65□□□□□ -1.99
PDGFBP01127 MTND4P25-201ENST00000441039 533 ntBASIC2.65□□□□□ -1.99
PDGFBP01127 MTCO1P19-201ENST00000443487 500 ntBASIC2.65□□□□□ -1.99
PDGFBP01127 GPM6BP1-201ENST00000446387 144 ntBASIC2.65□□□□□ -1.99
PDGFBP01127 AL033528.1-201ENST00000453780 140 ntBASIC2.65□□□□□ -1.99
PDGFBP01127 RPS29P20-201ENST00000489592 171 ntBASIC2.65□□□□□ -1.99
PDGFBP01127 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.65□□□□□ -1.99
PDGFBP01127 RN7SL636P-201ENST00000497504 294 ntBASIC2.65□□□□□ -1.99
PDGFBP01127 AC010424.1-201ENST00000506336 297 ntBASIC2.65□□□□□ -1.99
PDGFBP01127 RN7SKP24-201ENST00000515888 284 ntBASIC2.65□□□□□ -1.99
PDGFBP01127 Y_RNA.672-201ENST00000516289 104 ntBASIC2.65□□□□□ -1.99
PDGFBP01127 SNORA18.6-201ENST00000516792 115 ntBASIC2.65□□□□□ -1.99
PDGFBP01127 RNU6-1220P-201ENST00000517126 108 ntBASIC2.65□□□□□ -1.99
PDGFBP01127 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
PDGFBP01127 RANP3-201ENST00000530970 276 ntBASIC2.65□□□□□ -1.99
PDGFBP01127 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.65□□□□□ -1.99
PDGFBP01127 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.65□□□□□ -1.99
PDGFBP01127 AC009063.1-201ENST00000563342 702 ntBASIC2.65□□□□□ -1.99
PDGFBP01127 AC007151.1-201ENST00000572774 483 ntBASIC2.65□□□□□ -1.99
PDGFBP01127 MIR3117-201ENST00000584034 78 ntBASIC2.65□□□□□ -1.99
PDGFBP01127 AC005771.1-201ENST00000585581 349 ntBASIC2.65□□□□□ -1.99
PDGFBP01127 AC138749.5-201ENST00000611461 208 ntBASIC2.65□□□□□ -1.99
PDGFBP01127 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC2.65□□□□□ -1.99
PDGFBP01127 AC116165.2-201ENST00000616705 206 ntBASIC2.65□□□□□ -1.99
PDGFBP01127 AC084035.1-201ENST00000634543 607 ntBASIC2.65□□□□□ -1.99
PDGFBP01127 U2.21-201ENST00000637295 81 ntBASIC2.65□□□□□ -1.99
PDGFBP01127 AC099654.13-201ENST00000639774 207 ntBASIC2.65□□□□□ -1.99
PDGFBP01127 MTND5P19-201ENST00000424872 1794 ntBASIC2.64□□□□□ -1.99
PDGFBP01127 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
PDGFBP01127 FGF7P2-201ENST00000332473 296 ntBASIC2.64□□□□□ -1.99
PDGFBP01127 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
PDGFBP01127 SNORD114-1-201ENST00000362705 72 ntBASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 126.5 ms