Protein–RNA interactions for Protein: O95076

ALX3, Homeobox protein aristaless-like 3, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX3O95076 UBE2Q2P9-201ENST00000490086 202 ntBASIC4.41□□□□□ -1.7
ALX3O95076 AC005840.1-201ENST00000498412 377 ntBASIC4.41□□□□□ -1.7
ALX3O95076 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC4.41□□□□□ -1.7
ALX3O95076 RNU6-941P-201ENST00000516346 108 ntBASIC4.41□□□□□ -1.7
ALX3O95076 RN7SKP49-201ENST00000516675 260 ntBASIC4.41□□□□□ -1.7
ALX3O95076 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC4.41□□□□□ -1.7
ALX3O95076 AC126177.5-201ENST00000549599 178 ntBASIC4.41□□□□□ -1.7
ALX3O95076 RPL21P9-201ENST00000556149 474 ntBASIC4.41□□□□□ -1.7
ALX3O95076 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.41□□□□□ -1.7
ALX3O95076 AL133393.1-201ENST00000603277 287 ntBASIC4.41□□□□□ -1.7
ALX3O95076 AP005432.2-201ENST00000608162 586 ntBASIC4.41□□□□□ -1.7
ALX3O95076 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC4.41□□□□□ -1.7
ALX3O95076 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC4.41□□□□□ -1.7
ALX3O95076 AC005086.4-201ENST00000623065 213 ntBASIC4.41□□□□□ -1.7
ALX3O95076 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.41□□□□□ -1.7
ALX3O95076 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.41□□□□□ -1.7
ALX3O95076 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
ALX3O95076 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.41□□□□□ -1.7
ALX3O95076 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
ALX3O95076 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.4□□□□□ -1.7
ALX3O95076 DHX9P1-201ENST00000436565 3076 ntBASIC4.4□□□□□ -1.7
ALX3O95076 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.7
ALX3O95076 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.7
ALX3O95076 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
ALX3O95076 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
ALX3O95076 RNU6-653P-201ENST00000363074 106 ntBASIC4.4□□□□□ -1.71
ALX3O95076 RNU1-20P-201ENST00000363314 162 ntBASIC4.4□□□□□ -1.71
ALX3O95076 RNU6-626P-201ENST00000363354 107 ntBASIC4.4□□□□□ -1.71
ALX3O95076 RNU6-879P-201ENST00000364328 108 ntBASIC4.4□□□□□ -1.71
ALX3O95076 SNORA2.3-201ENST00000383920 135 ntBASIC4.4□□□□□ -1.71
ALX3O95076 RNU6-843P-201ENST00000384454 104 ntBASIC4.4□□□□□ -1.71
ALX3O95076 RNU6-178P-201ENST00000384631 104 ntBASIC4.4□□□□□ -1.71
ALX3O95076 MIR10A-201ENST00000385043 110 ntBASIC4.4□□□□□ -1.71
ALX3O95076 AL592291.1-201ENST00000403830 352 ntBASIC4.4□□□□□ -1.71
ALX3O95076 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.4□□□□□ -1.71
ALX3O95076 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.4□□□□□ -1.71
ALX3O95076 GEMIN8P3-201ENST00000445417 720 ntBASIC4.4□□□□□ -1.71
ALX3O95076 AL590399.6-201ENST00000446396 307 ntBASIC4.4□□□□□ -1.71
ALX3O95076 SRI-210ENST00000490437 570 ntTSL 2 BASIC4.4□□□□□ -1.71
ALX3O95076 RN7SL547P-201ENST00000490793 290 ntBASIC4.4□□□□□ -1.71
ALX3O95076 RPS27P26-201ENST00000494583 239 ntBASIC4.4□□□□□ -1.71
ALX3O95076 SNORA40.9-201ENST00000515895 93 ntBASIC4.4□□□□□ -1.71
ALX3O95076 RNU6-1114P-201ENST00000516022 107 ntBASIC4.4□□□□□ -1.71
ALX3O95076 RNU6-919P-201ENST00000516731 104 ntBASIC4.4□□□□□ -1.71
ALX3O95076 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC4.4□□□□□ -1.71
ALX3O95076 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC4.4□□□□□ -1.71
ALX3O95076 AC084757.4-201ENST00000616350 526 ntBASIC4.4□□□□□ -1.71
ALX3O95076 RN7SL722P-201ENST00000617780 284 ntBASIC4.4□□□□□ -1.71
ALX3O95076 RN7SL565P-201ENST00000618246 284 ntBASIC4.4□□□□□ -1.71
ALX3O95076 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.4□□□□□ -1.71
ALX3O95076 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.4□□□□□ -1.71
ALX3O95076 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.4□□□□□ -1.71
ALX3O95076 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC4.4□□□□□ -1.71
ALX3O95076 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.39□□□□□ -1.71
ALX3O95076 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.39□□□□□ -1.71
ALX3O95076 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
ALX3O95076 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.39□□□□□ -1.71
ALX3O95076 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC4.39□□□□□ -1.71
ALX3O95076 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
ALX3O95076 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.39□□□□□ -1.71
ALX3O95076 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.39□□□□□ -1.71
ALX3O95076 RNA5SP183-201ENST00000362452 119 ntBASIC4.39□□□□□ -1.71
ALX3O95076 RNU6-44P-201ENST00000384045 107 ntBASIC4.39□□□□□ -1.71
ALX3O95076 SNORA67-201ENST00000384423 137 ntBASIC4.39□□□□□ -1.71
ALX3O95076 MIR93-201ENST00000385024 80 ntBASIC4.39□□□□□ -1.71
ALX3O95076 MIR765-201ENST00000390226 114 ntBASIC4.39□□□□□ -1.71
ALX3O95076 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
ALX3O95076 SNORA40C-201ENST00000391285 128 ntBASIC4.39□□□□□ -1.71
ALX3O95076 AC009804.1-201ENST00000400949 179 ntBASIC4.39□□□□□ -1.71
ALX3O95076 RNU6ATAC18P-201ENST00000408413 101 ntBASIC4.39□□□□□ -1.71
ALX3O95076 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC4.39□□□□□ -1.71
ALX3O95076 RNU6-257P-201ENST00000410238 98 ntBASIC4.39□□□□□ -1.71
ALX3O95076 Y_RNA.597-201ENST00000410463 100 ntBASIC4.39□□□□□ -1.71
ALX3O95076 RNA5SP104-201ENST00000410989 118 ntBASIC4.39□□□□□ -1.71
ALX3O95076 RPS6P12-201ENST00000432491 726 ntBASIC4.39□□□□□ -1.71
ALX3O95076 AC096638.1-201ENST00000444678 216 ntBASIC4.39□□□□□ -1.71
ALX3O95076 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.39□□□□□ -1.71
ALX3O95076 AC025445.1-201ENST00000502728 300 ntBASIC4.39□□□□□ -1.71
ALX3O95076 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC4.39□□□□□ -1.71
ALX3O95076 ENPP7P9-201ENST00000514456 627 ntBASIC4.39□□□□□ -1.71
ALX3O95076 RNA5SP154-201ENST00000516193 111 ntBASIC4.39□□□□□ -1.71
ALX3O95076 RNA5SP392-201ENST00000516905 112 ntBASIC4.39□□□□□ -1.71
ALX3O95076 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.39□□□□□ -1.71
ALX3O95076 AC069240.1-201ENST00000548774 375 ntBASIC4.39□□□□□ -1.71
ALX3O95076 ATP5J2P6-201ENST00000565203 266 ntBASIC4.39□□□□□ -1.71
ALX3O95076 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC4.39□□□□□ -1.71
ALX3O95076 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.39□□□□□ -1.71
ALX3O95076 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC4.39□□□□□ -1.71
ALX3O95076 RPL7P50-201ENST00000600588 727 ntBASIC4.39□□□□□ -1.71
ALX3O95076 AC069307.1-201ENST00000602820 447 ntBASIC4.39□□□□□ -1.71
ALX3O95076 BMS1P21-201ENST00000634565 365 ntBASIC4.39□□□□□ -1.71
ALX3O95076 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.39□□□□□ -1.71
ALX3O95076 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
ALX3O95076 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
ALX3O95076 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
ALX3O95076 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
ALX3O95076 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.39□□□□□ -1.71
ALX3O95076 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
ALX3O95076 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
ALX3O95076 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 124.5 ms