Protein–RNA interactions for Protein: O75112

LDB3, LIM domain-binding protein 3, humanhuman

Predictions only

Length 727 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3O75112 AL359273.1-201ENST00000510918 627 ntBASIC3.11□□□□□ -1.91
LDB3O75112 SNORA19.2-201ENST00000516013 114 ntBASIC3.11□□□□□ -1.91
LDB3O75112 RNU6-1088P-201ENST00000516850 104 ntBASIC3.11□□□□□ -1.91
LDB3O75112 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC3.11□□□□□ -1.91
LDB3O75112 AP005639.2-201ENST00000527592 928 ntBASIC3.11□□□□□ -1.91
LDB3O75112 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.11□□□□□ -1.91
LDB3O75112 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.11□□□□□ -1.91
LDB3O75112 AC093249.1-201ENST00000567049 203 ntBASIC3.11□□□□□ -1.91
LDB3O75112 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.11□□□□□ -1.91
LDB3O75112 AC005668.1-201ENST00000571142 476 ntBASIC3.11□□□□□ -1.91
LDB3O75112 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC3.11□□□□□ -1.91
LDB3O75112 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.11□□□□□ -1.91
LDB3O75112 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.11□□□□□ -1.91
LDB3O75112 AC007998.5-201ENST00000622938 237 ntBASIC3.11□□□□□ -1.91
LDB3O75112 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.11□□□□□ -1.91
LDB3O75112 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
LDB3O75112 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
LDB3O75112 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.11□□□□□ -1.91
LDB3O75112 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
LDB3O75112 Z83843.1-201ENST00000604070 3685 ntBASIC3.11□□□□□ -1.91
LDB3O75112 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
LDB3O75112 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
LDB3O75112 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
LDB3O75112 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.1□□□□□ -1.91
LDB3O75112 MIR369-201ENST00000362155 70 ntBASIC3.1□□□□□ -1.91
LDB3O75112 U3.12-201ENST00000364498 214 ntBASIC3.1□□□□□ -1.91
LDB3O75112 RNU6-701P-201ENST00000384059 107 ntBASIC3.1□□□□□ -1.91
LDB3O75112 SNORA24.1-201ENST00000384401 135 ntBASIC3.1□□□□□ -1.91
LDB3O75112 RNVU1-14-201ENST00000384770 164 ntBASIC3.1□□□□□ -1.91
LDB3O75112 AL606923.1-201ENST00000406616 190 ntBASIC3.1□□□□□ -1.91
LDB3O75112 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.1□□□□□ -1.91
LDB3O75112 AC063979.1-201ENST00000415539 377 ntBASIC3.1□□□□□ -1.91
LDB3O75112 AC009161.1-201ENST00000417306 376 ntBASIC3.1□□□□□ -1.91
LDB3O75112 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.1□□□□□ -1.91
LDB3O75112 TRAPPC2P3-201ENST00000443200 321 ntBASIC3.1□□□□□ -1.91
LDB3O75112 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC3.1□□□□□ -1.91
LDB3O75112 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.1□□□□□ -1.91
LDB3O75112 RNU7-182P-201ENST00000459009 62 ntBASIC3.1□□□□□ -1.91
LDB3O75112 AC074250.1-201ENST00000511117 192 ntBASIC3.1□□□□□ -1.91
LDB3O75112 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.1□□□□□ -1.91
LDB3O75112 RNU6-273P-201ENST00000516937 96 ntBASIC3.1□□□□□ -1.91
LDB3O75112 RN7SKP258-201ENST00000517151 304 ntBASIC3.1□□□□□ -1.91
LDB3O75112 RN7SKP256-201ENST00000517201 314 ntBASIC3.1□□□□□ -1.91
LDB3O75112 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC3.1□□□□□ -1.91
LDB3O75112 BNIP3P6-201ENST00000549284 499 ntBASIC3.1□□□□□ -1.91
LDB3O75112 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC3.1□□□□□ -1.91
LDB3O75112 FRG2DP-202ENST00000566967 323 ntBASIC3.1□□□□□ -1.91
LDB3O75112 BNIP3P25-201ENST00000596023 559 ntBASIC3.1□□□□□ -1.91
LDB3O75112 AC092807.2-201ENST00000609367 243 ntBASIC3.1□□□□□ -1.91
LDB3O75112 SNORD39.4-201ENST00000620099 78 ntBASIC3.1□□□□□ -1.91
LDB3O75112 AL589994.2-201ENST00000621124 579 ntBASIC3.1□□□□□ -1.91
LDB3O75112 U6.98-201ENST00000637157 84 ntBASIC3.1□□□□□ -1.91
LDB3O75112 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.1□□□□□ -1.91
LDB3O75112 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
LDB3O75112 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
LDB3O75112 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
LDB3O75112 SNORA63.1-201ENST00000362493 131 ntBASIC3.09□□□□□ -1.91
LDB3O75112 RNU6-1252P-201ENST00000363054 104 ntBASIC3.09□□□□□ -1.91
LDB3O75112 RNU6-179P-201ENST00000363350 107 ntBASIC3.09□□□□□ -1.91
LDB3O75112 Y_RNA.259-201ENST00000364619 101 ntBASIC3.09□□□□□ -1.91
LDB3O75112 SNORD115-7-201ENST00000365306 82 ntBASIC3.09□□□□□ -1.91
LDB3O75112 Y_RNA.339-201ENST00000365325 102 ntBASIC3.09□□□□□ -1.91
LDB3O75112 RNU6-61P-201ENST00000365528 109 ntBASIC3.09□□□□□ -1.91
LDB3O75112 SMIM11P1-201ENST00000369586 178 ntBASIC3.09□□□□□ -1.91
LDB3O75112 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
LDB3O75112 Y_RNA.576-201ENST00000384781 102 ntBASIC3.09□□□□□ -1.91
LDB3O75112 MIR493-201ENST00000385254 89 ntBASIC3.09□□□□□ -1.91
LDB3O75112 MIR1290-201ENST00000408735 78 ntBASIC3.09□□□□□ -1.91
LDB3O75112 RNU4-26P-201ENST00000410270 107 ntBASIC3.09□□□□□ -1.91
LDB3O75112 RN7SKP140-201ENST00000411196 284 ntBASIC3.09□□□□□ -1.91
LDB3O75112 AC005300.1-201ENST00000428401 373 ntBASIC3.09□□□□□ -1.91
LDB3O75112 SAR1AP4-201ENST00000429225 591 ntBASIC3.09□□□□□ -1.91
LDB3O75112 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.09□□□□□ -1.91
LDB3O75112 NDUFA5P4-201ENST00000436704 385 ntBASIC3.09□□□□□ -1.91
LDB3O75112 TXNP1-201ENST00000441872 371 ntBASIC3.09□□□□□ -1.91
LDB3O75112 NIPA2P5-201ENST00000452282 464 ntBASIC3.09□□□□□ -1.91
LDB3O75112 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.09□□□□□ -1.91
LDB3O75112 RPL7P43-201ENST00000478876 753 ntBASIC3.09□□□□□ -1.91
LDB3O75112 AP006587.4-201ENST00000526053 529 ntBASIC3.09□□□□□ -1.91
LDB3O75112 AL442663.2-201ENST00000554385 511 ntBASIC3.09□□□□□ -1.91
LDB3O75112 AL121821.2-201ENST00000556081 394 ntBASIC3.09□□□□□ -1.91
LDB3O75112 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.09□□□□□ -1.91
LDB3O75112 AC005951.2-201ENST00000576282 495 ntBASIC3.09□□□□□ -1.91
LDB3O75112 MIR3171-201ENST00000584270 74 ntBASIC3.09□□□□□ -1.91
LDB3O75112 AC174048.1-201ENST00000603389 144 ntBASIC3.09□□□□□ -1.91
LDB3O75112 AL162730.1-201ENST00000605734 292 ntBASIC3.09□□□□□ -1.91
LDB3O75112 uc_338.1-201ENST00000612113 180 ntBASIC3.09□□□□□ -1.91
LDB3O75112 AC084781.2-201ENST00000615568 161 ntBASIC3.09□□□□□ -1.91
LDB3O75112 MIR8058-201ENST00000615737 89 ntBASIC3.09□□□□□ -1.91
LDB3O75112 PLCE1P1-201ENST00000622094 305 ntBASIC3.09□□□□□ -1.91
LDB3O75112 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.09□□□□□ -1.91
LDB3O75112 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
LDB3O75112 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
LDB3O75112 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.09□□□□□ -1.92
LDB3O75112 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
LDB3O75112 AC007256.1-201ENST00000392253 2765 ntBASIC3.09□□□□□ -1.92
LDB3O75112 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.09□□□□□ -1.92
LDB3O75112 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
LDB3O75112 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC3.08□□□□□ -1.92
LDB3O75112 RNA5SP72-201ENST00000364442 117 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms