Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 AC138393.1-203ENST00000327086 343 ntBASIC1.64□□□□□ -2.15
SGCEO43556 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
SGCEO43556 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
SGCEO43556 RNU5E-1-201ENST00000362477 120 ntBASIC1.64□□□□□ -2.15
SGCEO43556 RNU1-72P-201ENST00000362976 153 ntBASIC1.64□□□□□ -2.15
SGCEO43556 RNU4-51P-201ENST00000364206 140 ntBASIC1.64□□□□□ -2.15
SGCEO43556 RNU6-853P-201ENST00000364306 107 ntBASIC1.64□□□□□ -2.15
SGCEO43556 RNA5SP126-201ENST00000365092 109 ntBASIC1.64□□□□□ -2.15
SGCEO43556 SNORA25B-201ENST00000365507 128 ntBASIC1.64□□□□□ -2.15
SGCEO43556 AL359634.1-202ENST00000404721 284 ntBASIC1.64□□□□□ -2.15
SGCEO43556 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.64□□□□□ -2.15
SGCEO43556 AL449283.1-202ENST00000418249 604 ntBASIC1.64□□□□□ -2.15
SGCEO43556 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC1.64□□□□□ -2.15
SGCEO43556 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC1.64□□□□□ -2.15
SGCEO43556 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC1.64□□□□□ -2.15
SGCEO43556 BRK1P2-201ENST00000442875 223 ntBASIC1.64□□□□□ -2.15
SGCEO43556 PPP1R2P5-201ENST00000457256 603 ntBASIC1.64□□□□□ -2.15
SGCEO43556 AC112771.1-201ENST00000463581 102 ntBASIC1.64□□□□□ -2.15
SGCEO43556 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC1.64□□□□□ -2.15
SGCEO43556 AC140059.1-201ENST00000489238 361 ntBASIC1.64□□□□□ -2.15
SGCEO43556 AC139453.3-201ENST00000493276 369 ntBASIC1.64□□□□□ -2.15
SGCEO43556 AC092436.1-201ENST00000506450 503 ntBASIC1.64□□□□□ -2.15
SGCEO43556 ACA59.2-201ENST00000517061 156 ntBASIC1.64□□□□□ -2.15
SGCEO43556 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC1.64□□□□□ -2.15
SGCEO43556 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC1.64□□□□□ -2.15
SGCEO43556 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.64□□□□□ -2.15
SGCEO43556 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC1.64□□□□□ -2.15
SGCEO43556 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC1.64□□□□□ -2.15
SGCEO43556 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC1.64□□□□□ -2.15
SGCEO43556 AC034229.4-201ENST00000607861 441 ntBASIC1.64□□□□□ -2.15
SGCEO43556 AC106052.1-201ENST00000608029 497 ntBASIC1.64□□□□□ -2.15
SGCEO43556 MIR6134-201ENST00000617606 109 ntBASIC1.64□□□□□ -2.15
SGCEO43556 AC017037.3-201ENST00000625016 472 ntBASIC1.64□□□□□ -2.15
SGCEO43556 CDC27P3-201ENST00000635418 1910 ntBASIC1.64□□□□□ -2.15
SGCEO43556 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC1.64□□□□□ -2.15
SGCEO43556 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC1.63□□□□□ -2.15
SGCEO43556 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
SGCEO43556 MIR518A2-201ENST00000384966 87 ntBASIC1.63□□□□□ -2.15
SGCEO43556 AL079342.1-201ENST00000401460 267 ntBASIC1.63□□□□□ -2.15
SGCEO43556 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC1.63□□□□□ -2.15
SGCEO43556 MIR1284-201ENST00000408337 120 ntBASIC1.63□□□□□ -2.15
SGCEO43556 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC1.63□□□□□ -2.15
SGCEO43556 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.63□□□□□ -2.15
SGCEO43556 AC244636.1-201ENST00000421152 228 ntBASIC1.63□□□□□ -2.15
SGCEO43556 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC1.63□□□□□ -2.15
SGCEO43556 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC1.63□□□□□ -2.15
SGCEO43556 RSU1P2-202ENST00000437884 485 ntBASIC1.63□□□□□ -2.15
SGCEO43556 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC1.63□□□□□ -2.15
SGCEO43556 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC1.63□□□□□ -2.15
SGCEO43556 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC1.63□□□□□ -2.15
SGCEO43556 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC1.63□□□□□ -2.15
SGCEO43556 AC116655.1-201ENST00000508324 901 ntBASIC1.63□□□□□ -2.15
SGCEO43556 AC117522.2-201ENST00000510049 657 ntBASIC1.63□□□□□ -2.15
SGCEO43556 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.63□□□□□ -2.15
SGCEO43556 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.63□□□□□ -2.15
SGCEO43556 AC034114.1-201ENST00000520293 285 ntBASIC1.63□□□□□ -2.15
SGCEO43556 UTP23-205ENST00000520733 369 ntTSL 3 BASIC1.63□□□□□ -2.15
SGCEO43556 AP005639.2-201ENST00000527592 928 ntBASIC1.63□□□□□ -2.15
SGCEO43556 RANP3-201ENST00000530970 276 ntBASIC1.63□□□□□ -2.15
SGCEO43556 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC1.63□□□□□ -2.15
SGCEO43556 MIR4782-201ENST00000577987 79 ntBASIC1.63□□□□□ -2.15
SGCEO43556 AC068790.3-201ENST00000602988 553 ntBASIC1.63□□□□□ -2.15
SGCEO43556 RPL21P136-201ENST00000605378 396 ntBASIC1.63□□□□□ -2.15
SGCEO43556 AC087045.1-201ENST00000605856 382 ntBASIC1.63□□□□□ -2.15
SGCEO43556 AC093673.2-201ENST00000609674 331 ntBASIC1.63□□□□□ -2.15
SGCEO43556 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.63□□□□□ -2.15
SGCEO43556 ATM-228ENST00000639240 498 ntTSL 5 BASIC1.63□□□□□ -2.15
SGCEO43556 ATM-230ENST00000640388 578 ntTSL 5 BASIC1.63□□□□□ -2.15
SGCEO43556 TEX21P-201ENST00000447107 1476 ntBASIC1.63□□□□□ -2.15
SGCEO43556 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
SGCEO43556 AP000776.1-201ENST00000530032 1663 ntBASIC1.62□□□□□ -2.15
SGCEO43556 Y_RNA.110-201ENST00000363220 99 ntBASIC1.62□□□□□ -2.15
SGCEO43556 SNORA16.1-201ENST00000364597 132 ntBASIC1.62□□□□□ -2.15
SGCEO43556 RNU4-26P-201ENST00000410270 107 ntBASIC1.62□□□□□ -2.15
SGCEO43556 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC1.62□□□□□ -2.15
SGCEO43556 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.62□□□□□ -2.15
SGCEO43556 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.62□□□□□ -2.15
SGCEO43556 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC1.62□□□□□ -2.15
SGCEO43556 KATNBL1P6-201ENST00000453433 915 ntBASIC1.62□□□□□ -2.15
SGCEO43556 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
SGCEO43556 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.62□□□□□ -2.15
SGCEO43556 SNORA31.3-201ENST00000516029 96 ntBASIC1.62□□□□□ -2.15
SGCEO43556 RNU5B-3P-201ENST00000516601 115 ntBASIC1.62□□□□□ -2.15
SGCEO43556 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC1.62□□□□□ -2.15
SGCEO43556 YWHAZP1-201ENST00000556286 722 ntBASIC1.62□□□□□ -2.15
SGCEO43556 AC112220.2-201ENST00000605513 533 ntBASIC1.62□□□□□ -2.15
SGCEO43556 AL133445.2-201ENST00000611191 527 ntBASIC1.62□□□□□ -2.15
SGCEO43556 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.62□□□□□ -2.15
SGCEO43556 AC013470.4-201ENST00000619978 986 ntBASIC1.62□□□□□ -2.15
SGCEO43556 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC1.62□□□□□ -2.15
SGCEO43556 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.62□□□□□ -2.15
SGCEO43556 RNA5SP212-201ENST00000391223 107 ntBASIC1.61□□□□□ -2.15
SGCEO43556 MTCO1P17-201ENST00000411522 491 ntBASIC1.61□□□□□ -2.15
SGCEO43556 AC078974.1-201ENST00000411597 223 ntBASIC1.61□□□□□ -2.15
SGCEO43556 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC1.61□□□□□ -2.15
SGCEO43556 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC1.61□□□□□ -2.15
SGCEO43556 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.61□□□□□ -2.15
SGCEO43556 HSPE1P21-201ENST00000438283 308 ntBASIC1.61□□□□□ -2.15
SGCEO43556 AC005094.1-201ENST00000440420 368 ntBASIC1.61□□□□□ -2.15
SGCEO43556 USP9YP10-201ENST00000454868 628 ntBASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms