Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 RNU6-213P-201ENST00000384051 104 ntBASIC5.38□□□□□ -1.55
HOXA2O43364 BX510359.2-201ENST00000417920 305 ntBASIC5.38□□□□□ -1.55
HOXA2O43364 SNRPEP9-201ENST00000436794 238 ntBASIC5.38□□□□□ -1.55
HOXA2O43364 AURKAPS2-201ENST00000454983 333 ntBASIC5.38□□□□□ -1.55
HOXA2O43364 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
HOXA2O43364 AC005840.1-201ENST00000498412 377 ntBASIC5.38□□□□□ -1.55
HOXA2O43364 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.38□□□□□ -1.55
HOXA2O43364 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.38□□□□□ -1.55
HOXA2O43364 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC5.38□□□□□ -1.55
HOXA2O43364 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.38□□□□□ -1.55
HOXA2O43364 AL356157.2-201ENST00000605122 111 ntBASIC5.38□□□□□ -1.55
HOXA2O43364 AC019206.1-201ENST00000621938 425 ntBASIC5.38□□□□□ -1.55
HOXA2O43364 MIR6810-201ENST00000622701 70 ntBASIC5.38□□□□□ -1.55
HOXA2O43364 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
HOXA2O43364 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
HOXA2O43364 A2MP1-204ENST00000566278 4130 ntBASIC5.38□□□□□ -1.55
HOXA2O43364 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
HOXA2O43364 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.37□□□□□ -1.55
HOXA2O43364 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
HOXA2O43364 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC5.37□□□□□ -1.55
HOXA2O43364 Y_RNA.7-201ENST00000362352 102 ntBASIC5.37□□□□□ -1.55
HOXA2O43364 RN7SKP145-201ENST00000363291 303 ntBASIC5.37□□□□□ -1.55
HOXA2O43364 SNORA72.2-201ENST00000365028 127 ntBASIC5.37□□□□□ -1.55
HOXA2O43364 RNA5SP241-201ENST00000391326 114 ntBASIC5.37□□□□□ -1.55
HOXA2O43364 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC5.37□□□□□ -1.55
HOXA2O43364 AC010285.1-201ENST00000470580 392 ntBASIC5.37□□□□□ -1.55
HOXA2O43364 UBE2CP3-201ENST00000502715 450 ntBASIC5.37□□□□□ -1.55
HOXA2O43364 HMGB3P3-201ENST00000510526 400 ntBASIC5.37□□□□□ -1.55
HOXA2O43364 RNU6-58P-201ENST00000517143 103 ntBASIC5.37□□□□□ -1.55
HOXA2O43364 ZNF192P1-203ENST00000565888 810 ntBASIC5.37□□□□□ -1.55
HOXA2O43364 AC022441.3-201ENST00000605737 136 ntBASIC5.37□□□□□ -1.55
HOXA2O43364 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
HOXA2O43364 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.37□□□□□ -1.55
HOXA2O43364 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HOXA2O43364 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HOXA2O43364 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
HOXA2O43364 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
HOXA2O43364 SMG1P4-204ENST00000523028 4131 ntBASIC5.37□□□□□ -1.55
HOXA2O43364 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC5.36□□□□□ -1.55
HOXA2O43364 AL109809.4-201ENST00000603520 2185 ntBASIC5.36□□□□□ -1.55
HOXA2O43364 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.36□□□□□ -1.55
HOXA2O43364 AL022311.1-201ENST00000623726 19416 ntBASIC5.36□□□□□ -1.55
HOXA2O43364 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
HOXA2O43364 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
HOXA2O43364 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
HOXA2O43364 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.36□□□□□ -1.55
HOXA2O43364 Y_RNA.23-201ENST00000362496 106 ntBASIC5.36□□□□□ -1.55
HOXA2O43364 RNU1-32P-201ENST00000363937 159 ntBASIC5.36□□□□□ -1.55
HOXA2O43364 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
HOXA2O43364 SNORA70.10-201ENST00000384515 134 ntBASIC5.36□□□□□ -1.55
HOXA2O43364 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
HOXA2O43364 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
HOXA2O43364 AC114755.2-201ENST00000413520 361 ntBASIC5.36□□□□□ -1.55
HOXA2O43364 RPL7AP61-201ENST00000443410 636 ntBASIC5.36□□□□□ -1.55
HOXA2O43364 AL451050.1-201ENST00000450126 415 ntBASIC5.36□□□□□ -1.55
HOXA2O43364 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC5.36□□□□□ -1.55
HOXA2O43364 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
HOXA2O43364 MIR378J-201ENST00000611988 109 ntBASIC5.36□□□□□ -1.55
HOXA2O43364 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
HOXA2O43364 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.36□□□□□ -1.55
HOXA2O43364 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC5.36□□□□□ -1.55
HOXA2O43364 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC5.36□□□□□ -1.55
HOXA2O43364 AC018529.3-201ENST00000624212 2254 ntBASIC5.36□□□□□ -1.55
HOXA2O43364 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.36□□□□□ -1.55
HOXA2O43364 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC5.36□□□□□ -1.55
HOXA2O43364 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
HOXA2O43364 AL356489.2-201ENST00000566968 3528 ntBASIC5.36□□□□□ -1.55
HOXA2O43364 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
HOXA2O43364 MFSD8-216ENST00000641147 4009 ntBASIC5.36□□□□□ -1.55
HOXA2O43364 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
HOXA2O43364 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.36□□□□□ -1.55
HOXA2O43364 AC000123.3-201ENST00000624029 4975 ntBASIC5.35□□□□□ -1.55
HOXA2O43364 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
HOXA2O43364 MAPK10-328ENST00000641553 4009 ntBASIC5.35□□□□□ -1.55
HOXA2O43364 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
HOXA2O43364 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
HOXA2O43364 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.35□□□□□ -1.55
HOXA2O43364 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.35□□□□□ -1.55
HOXA2O43364 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
HOXA2O43364 RNA5SP505-201ENST00000364748 108 ntBASIC5.35□□□□□ -1.55
HOXA2O43364 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC5.35□□□□□ -1.55
HOXA2O43364 MIR186-201ENST00000384988 86 ntBASIC5.35□□□□□ -1.55
HOXA2O43364 Y_RNA.595-201ENST00000410403 105 ntBASIC5.35□□□□□ -1.55
HOXA2O43364 ELOCP19-201ENST00000411919 318 ntBASIC5.35□□□□□ -1.55
HOXA2O43364 AC244098.2-201ENST00000422068 99 ntBASIC5.35□□□□□ -1.55
HOXA2O43364 RPL23AP95-201ENST00000426806 265 ntBASIC5.35□□□□□ -1.55
HOXA2O43364 SNORD108-201ENST00000459332 71 ntBASIC5.35□□□□□ -1.55
HOXA2O43364 RPS4XP22-201ENST00000480755 780 ntBASIC5.35□□□□□ -1.55
HOXA2O43364 AC093840.1-201ENST00000511599 336 ntBASIC5.35□□□□□ -1.55
HOXA2O43364 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.35□□□□□ -1.55
HOXA2O43364 RN7SKP276-201ENST00000516242 268 ntBASIC5.35□□□□□ -1.55
HOXA2O43364 RNU6-426P-201ENST00000516464 97 ntBASIC5.35□□□□□ -1.55
HOXA2O43364 AC055872.1-201ENST00000570978 278 ntBASIC5.35□□□□□ -1.55
HOXA2O43364 RN7SL290P-201ENST00000578661 300 ntBASIC5.35□□□□□ -1.55
HOXA2O43364 MIR3684-201ENST00000579779 74 ntBASIC5.35□□□□□ -1.55
HOXA2O43364 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.35□□□□□ -1.55
HOXA2O43364 AC023043.4-201ENST00000612081 449 ntBASIC5.35□□□□□ -1.55
HOXA2O43364 snoU18.1-201ENST00000629629 71 ntBASIC5.35□□□□□ -1.55
HOXA2O43364 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5.35□□□□□ -1.55
HOXA2O43364 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 119.4 ms