Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 AL596276.1-201ENST00000434465 418 ntBASIC2.88□□□□□ -1.95
TO15178 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.88□□□□□ -1.95
TO15178 AL714022.1-201ENST00000439897 151 ntBASIC2.88□□□□□ -1.95
TO15178 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.88□□□□□ -1.95
TO15178 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.88□□□□□ -1.95
TO15178 BX510359.1-201ENST00000456973 237 ntBASIC2.88□□□□□ -1.95
TO15178 GMFBP1-201ENST00000467831 427 ntBASIC2.88□□□□□ -1.95
TO15178 TRBV1-201ENST00000476502 284 ntBASIC2.88□□□□□ -1.95
TO15178 RPS27P26-201ENST00000494583 239 ntBASIC2.88□□□□□ -1.95
TO15178 EIF4EP3-201ENST00000498782 656 ntBASIC2.88□□□□□ -1.95
TO15178 SUMO2P6-201ENST00000505273 288 ntBASIC2.88□□□□□ -1.95
TO15178 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC2.88□□□□□ -1.95
TO15178 SEM1P1-201ENST00000506694 209 ntBASIC2.88□□□□□ -1.95
TO15178 AC009646.1-201ENST00000510455 318 ntBASIC2.88□□□□□ -1.95
TO15178 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.88□□□□□ -1.95
TO15178 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC2.88□□□□□ -1.95
TO15178 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC2.88□□□□□ -1.95
TO15178 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.88□□□□□ -1.95
TO15178 AC024940.5-201ENST00000622889 474 ntBASIC2.88□□□□□ -1.95
TO15178 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
TO15178 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
TO15178 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.88□□□□□ -1.95
TO15178 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.88□□□□□ -1.95
TO15178 MTND4P35-201ENST00000604257 1375 ntBASIC2.87□□□□□ -1.95
TO15178 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.87□□□□□ -1.95
TO15178 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
TO15178 MTND5P19-201ENST00000424872 1794 ntBASIC2.87□□□□□ -1.95
TO15178 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
TO15178 RNU2-29P-201ENST00000410423 189 ntBASIC2.87□□□□□ -1.95
TO15178 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC2.87□□□□□ -1.95
TO15178 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC2.87□□□□□ -1.95
TO15178 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.87□□□□□ -1.95
TO15178 UBE2V1P10-201ENST00000414685 269 ntBASIC2.87□□□□□ -1.95
TO15178 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.87□□□□□ -1.95
TO15178 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.87□□□□□ -1.95
TO15178 RPL37P4-201ENST00000448908 268 ntBASIC2.87□□□□□ -1.95
TO15178 RPL26P9-201ENST00000457466 433 ntBASIC2.87□□□□□ -1.95
TO15178 AL162395.1-201ENST00000457882 422 ntBASIC2.87□□□□□ -1.95
TO15178 RNU7-23P-201ENST00000459465 62 ntBASIC2.87□□□□□ -1.95
TO15178 RPL27AP5-201ENST00000469428 449 ntBASIC2.87□□□□□ -1.95
TO15178 AC126182.1-201ENST00000478134 357 ntBASIC2.87□□□□□ -1.95
TO15178 AC117522.3-201ENST00000507974 584 ntBASIC2.87□□□□□ -1.95
TO15178 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2.87□□□□□ -1.95
TO15178 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.87□□□□□ -1.95
TO15178 AC104383.1-201ENST00000530297 370 ntBASIC2.87□□□□□ -1.95
TO15178 HSPE1P20-201ENST00000538133 289 ntBASIC2.87□□□□□ -1.95
TO15178 AL512310.1-201ENST00000548639 172 ntBASIC2.87□□□□□ -1.95
TO15178 AL391261.3-201ENST00000557194 520 ntBASIC2.87□□□□□ -1.95
TO15178 AL157871.3-201ENST00000557231 293 ntBASIC2.87□□□□□ -1.95
TO15178 MIR4703-201ENST00000577728 79 ntBASIC2.87□□□□□ -1.95
TO15178 MIR5195-201ENST00000583555 115 ntBASIC2.87□□□□□ -1.95
TO15178 UBL5P2-201ENST00000583788 219 ntBASIC2.87□□□□□ -1.95
TO15178 AL137843.1-201ENST00000605078 385 ntBASIC2.87□□□□□ -1.95
TO15178 AC126118.1-201ENST00000607744 628 ntBASIC2.87□□□□□ -1.95
TO15178 AF250324.2-201ENST00000608299 610 ntBASIC2.87□□□□□ -1.95
TO15178 AC013562.2-201ENST00000611632 603 ntBASIC2.87□□□□□ -1.95
TO15178 AC068792.1-201ENST00000621354 417 ntBASIC2.87□□□□□ -1.95
TO15178 MIR3651-201ENST00000630427 90 ntBASIC2.87□□□□□ -1.95
TO15178 U2.21-201ENST00000637295 81 ntBASIC2.87□□□□□ -1.95
TO15178 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
TO15178 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
TO15178 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
TO15178 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
TO15178 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
TO15178 AL035425.3-201ENST00000564206 4996 ntBASIC2.86□□□□□ -1.95
TO15178 Y_RNA.33-201ENST00000362591 102 ntBASIC2.86□□□□□ -1.95
TO15178 RNU6-996P-201ENST00000365438 107 ntBASIC2.86□□□□□ -1.95
TO15178 RNU6-395P-201ENST00000365662 106 ntBASIC2.86□□□□□ -1.95
TO15178 RNU6-116P-201ENST00000384042 109 ntBASIC2.86□□□□□ -1.95
TO15178 Y_RNA.505-201ENST00000384489 102 ntBASIC2.86□□□□□ -1.95
TO15178 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
TO15178 RNU6-1158P-201ENST00000391167 107 ntBASIC2.86□□□□□ -1.95
TO15178 AC068050.1-201ENST00000394891 380 ntBASIC2.86□□□□□ -1.95
TO15178 RPL17P50-201ENST00000396131 546 ntBASIC2.86□□□□□ -1.95
TO15178 AL591416.1-201ENST00000404015 867 ntBASIC2.86□□□□□ -1.95
TO15178 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.86□□□□□ -1.95
TO15178 NDUFS5P4-201ENST00000412983 318 ntBASIC2.86□□□□□ -1.95
TO15178 AF274854.1-201ENST00000413236 615 ntBASIC2.86□□□□□ -1.95
TO15178 RPL26P27-201ENST00000414397 437 ntBASIC2.86□□□□□ -1.95
TO15178 BX682237.1-201ENST00000415016 335 ntBASIC2.86□□□□□ -1.95
TO15178 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.86□□□□□ -1.95
TO15178 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC2.86□□□□□ -1.95
TO15178 HMGB1P9-201ENST00000429856 646 ntBASIC2.86□□□□□ -1.95
TO15178 RPL7P54-201ENST00000438336 674 ntBASIC2.86□□□□□ -1.95
TO15178 AC009296.1-201ENST00000443146 155 ntBASIC2.86□□□□□ -1.95
TO15178 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC2.86□□□□□ -1.95
TO15178 AC104058.1-201ENST00000448028 297 ntBASIC2.86□□□□□ -1.95
TO15178 AC003071.1-201ENST00000451219 789 ntBASIC2.86□□□□□ -1.95
TO15178 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.86□□□□□ -1.95
TO15178 MTATP6P7-201ENST00000453315 681 ntBASIC2.86□□□□□ -1.95
TO15178 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.86□□□□□ -1.95
TO15178 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC2.86□□□□□ -1.95
TO15178 AC139453.3-201ENST00000493276 369 ntBASIC2.86□□□□□ -1.95
TO15178 AC019235.1-201ENST00000503847 207 ntBASIC2.86□□□□□ -1.95
TO15178 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC2.86□□□□□ -1.95
TO15178 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.86□□□□□ -1.95
TO15178 RNU1-103P-201ENST00000516502 125 ntBASIC2.86□□□□□ -1.95
TO15178 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.86□□□□□ -1.95
TO15178 NACAP3-201ENST00000552100 481 ntBASIC2.86□□□□□ -1.95
TO15178 AL512360.1-201ENST00000555346 234 ntBASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms