Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC3.64□□□□□ -1.83
FOXN3O00409 DUSP12P1-201ENST00000612874 516 ntBASIC3.64□□□□□ -1.83
FOXN3O00409 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.64□□□□□ -1.83
FOXN3O00409 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.64□□□□□ -1.83
FOXN3O00409 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
FOXN3O00409 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.64□□□□□ -1.83
FOXN3O00409 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.64□□□□□ -1.83
FOXN3O00409 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
FOXN3O00409 AL356274.2-201ENST00000624379 3752 ntBASIC3.63□□□□□ -1.83
FOXN3O00409 PWAR6-201ENST00000552334 4618 ntBASIC3.63□□□□□ -1.83
FOXN3O00409 RNU6-393P-201ENST00000384475 107 ntBASIC3.63□□□□□ -1.83
FOXN3O00409 RNU6-658P-201ENST00000384606 106 ntBASIC3.63□□□□□ -1.83
FOXN3O00409 MIR554-201ENST00000384874 96 ntBASIC3.63□□□□□ -1.83
FOXN3O00409 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
FOXN3O00409 RN7SKP111-201ENST00000410349 271 ntBASIC3.63□□□□□ -1.83
FOXN3O00409 AC126124.2-201ENST00000413542 321 ntBASIC3.63□□□□□ -1.83
FOXN3O00409 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC3.63□□□□□ -1.83
FOXN3O00409 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC3.63□□□□□ -1.83
FOXN3O00409 HMGN2P30-201ENST00000423237 256 ntBASIC3.63□□□□□ -1.83
FOXN3O00409 RPS15AP27-201ENST00000449183 343 ntBASIC3.63□□□□□ -1.83
FOXN3O00409 RPL23AP67-201ENST00000465341 474 ntBASIC3.63□□□□□ -1.83
FOXN3O00409 AC034236.1-201ENST00000469891 373 ntBASIC3.63□□□□□ -1.83
FOXN3O00409 AP002884.2-201ENST00000471647 395 ntBASIC3.63□□□□□ -1.83
FOXN3O00409 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC3.63□□□□□ -1.83
FOXN3O00409 CCDC34P1-201ENST00000507441 517 ntBASIC3.63□□□□□ -1.83
FOXN3O00409 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC3.63□□□□□ -1.83
FOXN3O00409 AC107934.2-201ENST00000518653 310 ntBASIC3.63□□□□□ -1.83
FOXN3O00409 AC026403.1-201ENST00000518938 295 ntBASIC3.63□□□□□ -1.83
FOXN3O00409 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.63□□□□□ -1.83
FOXN3O00409 H3F3AP1-201ENST00000559984 334 ntBASIC3.63□□□□□ -1.83
FOXN3O00409 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC3.63□□□□□ -1.83
FOXN3O00409 MIR92B-201ENST00000607575 96 ntBASIC3.63□□□□□ -1.83
FOXN3O00409 AL121757.2-201ENST00000611223 313 ntBASIC3.63□□□□□ -1.83
FOXN3O00409 AC005858.4-201ENST00000623191 700 ntBASIC3.63□□□□□ -1.83
FOXN3O00409 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.63□□□□□ -1.83
FOXN3O00409 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.63□□□□□ -1.83
FOXN3O00409 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
FOXN3O00409 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
FOXN3O00409 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.63□□□□□ -1.83
FOXN3O00409 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
FOXN3O00409 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
FOXN3O00409 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
FOXN3O00409 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.62□□□□□ -1.83
FOXN3O00409 Y_RNA.11-201ENST00000362375 109 ntBASIC3.62□□□□□ -1.83
FOXN3O00409 Y_RNA.231-201ENST00000364358 102 ntBASIC3.62□□□□□ -1.83
FOXN3O00409 Y_RNA.279-201ENST00000364763 95 ntBASIC3.62□□□□□ -1.83
FOXN3O00409 RNU6-395P-201ENST00000365662 106 ntBASIC3.62□□□□□ -1.83
FOXN3O00409 RNU6-38P-201ENST00000384085 107 ntBASIC3.62□□□□□ -1.83
FOXN3O00409 RNU6-45P-201ENST00000384471 107 ntBASIC3.62□□□□□ -1.83
FOXN3O00409 Y_RNA.529-201ENST00000384586 119 ntBASIC3.62□□□□□ -1.83
FOXN3O00409 RNA5SP252-201ENST00000391131 119 ntBASIC3.62□□□□□ -1.83
FOXN3O00409 RNU6-332P-201ENST00000391193 108 ntBASIC3.62□□□□□ -1.83
FOXN3O00409 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.62□□□□□ -1.83
FOXN3O00409 AL513185.2-201ENST00000425543 193 ntBASIC3.62□□□□□ -1.83
FOXN3O00409 AC091286.1-201ENST00000431233 461 ntBASIC3.62□□□□□ -1.83
FOXN3O00409 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC3.62□□□□□ -1.83
FOXN3O00409 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.62□□□□□ -1.83
FOXN3O00409 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.62□□□□□ -1.83
FOXN3O00409 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.62□□□□□ -1.83
FOXN3O00409 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.62□□□□□ -1.83
FOXN3O00409 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC3.62□□□□□ -1.83
FOXN3O00409 AL031183.1-201ENST00000457667 207 ntBASIC3.62□□□□□ -1.83
FOXN3O00409 RNU6-333P-201ENST00000459117 107 ntBASIC3.62□□□□□ -1.83
FOXN3O00409 RPL32P34-201ENST00000486380 400 ntBASIC3.62□□□□□ -1.83
FOXN3O00409 RPS29P20-201ENST00000489592 171 ntBASIC3.62□□□□□ -1.83
FOXN3O00409 RPL38P4-201ENST00000502376 214 ntBASIC3.62□□□□□ -1.83
FOXN3O00409 MTND3P22-201ENST00000510932 243 ntBASIC3.62□□□□□ -1.83
FOXN3O00409 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.62□□□□□ -1.83
FOXN3O00409 AC112206.3-201ENST00000514578 389 ntBASIC3.62□□□□□ -1.83
FOXN3O00409 SNORA31.19-201ENST00000517079 126 ntBASIC3.62□□□□□ -1.83
FOXN3O00409 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.62□□□□□ -1.83
FOXN3O00409 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.62□□□□□ -1.83
FOXN3O00409 HIGD1AP1-201ENST00000550979 275 ntBASIC3.62□□□□□ -1.83
FOXN3O00409 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC3.62□□□□□ -1.83
FOXN3O00409 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.62□□□□□ -1.83
FOXN3O00409 AMZ2P1-203ENST00000565833 850 ntBASIC3.62□□□□□ -1.83
FOXN3O00409 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.62□□□□□ -1.83
FOXN3O00409 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.62□□□□□ -1.83
FOXN3O00409 AC012119.1-201ENST00000603184 222 ntBASIC3.62□□□□□ -1.83
FOXN3O00409 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.62□□□□□ -1.83
FOXN3O00409 AP003400.5-201ENST00000624827 617 ntBASIC3.62□□□□□ -1.83
FOXN3O00409 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.62□□□□□ -1.83
FOXN3O00409 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.62□□□□□ -1.83
FOXN3O00409 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
FOXN3O00409 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
FOXN3O00409 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.61□□□□□ -1.83
FOXN3O00409 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
FOXN3O00409 AC017071.1-201ENST00000564407 2204 ntBASIC3.61□□□□□ -1.83
FOXN3O00409 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
FOXN3O00409 SNORD3E-201ENST00000362899 217 ntBASIC3.61□□□□□ -1.83
FOXN3O00409 Y_RNA.373-201ENST00000365600 103 ntBASIC3.61□□□□□ -1.83
FOXN3O00409 Y_RNA.378-201ENST00000365652 113 ntBASIC3.61□□□□□ -1.83
FOXN3O00409 RNA5SP219-201ENST00000390940 113 ntBASIC3.61□□□□□ -1.83
FOXN3O00409 AL592114.1-201ENST00000403842 483 ntBASIC3.61□□□□□ -1.83
FOXN3O00409 Y_RNA.615-201ENST00000410769 117 ntBASIC3.61□□□□□ -1.83
FOXN3O00409 AL645937.1-202ENST00000421799 937 ntBASIC3.61□□□□□ -1.83
FOXN3O00409 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.61□□□□□ -1.83
FOXN3O00409 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.61□□□□□ -1.83
FOXN3O00409 MTND4LP16-201ENST00000440828 295 ntBASIC3.61□□□□□ -1.83
FOXN3O00409 AC093019.1-201ENST00000443135 252 ntBASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 123.7 ms