Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 RNU6-754P-201ENST00000391166 107 ntBASIC2.25□□□□□ -2.05
TRIM49D1C9J1S8 AL109755.1-201ENST00000401791 649 ntBASIC2.25□□□□□ -2.05
TRIM49D1C9J1S8 RPS4XP8-201ENST00000402039 771 ntBASIC2.25□□□□□ -2.05
TRIM49D1C9J1S8 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC2.25□□□□□ -2.05
TRIM49D1C9J1S8 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC2.25□□□□□ -2.05
TRIM49D1C9J1S8 CCDC58P2-201ENST00000417131 366 ntBASIC2.25□□□□□ -2.05
TRIM49D1C9J1S8 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC2.25□□□□□ -2.05
TRIM49D1C9J1S8 MORF4L1P6-201ENST00000418771 268 ntBASIC2.25□□□□□ -2.05
TRIM49D1C9J1S8 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC2.25□□□□□ -2.05
TRIM49D1C9J1S8 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC2.25□□□□□ -2.05
TRIM49D1C9J1S8 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC2.25□□□□□ -2.05
TRIM49D1C9J1S8 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.25□□□□□ -2.05
TRIM49D1C9J1S8 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC2.25□□□□□ -2.05
TRIM49D1C9J1S8 ELOCP30-201ENST00000447108 299 ntBASIC2.25□□□□□ -2.05
TRIM49D1C9J1S8 MTND1P27-201ENST00000451117 902 ntBASIC2.25□□□□□ -2.05
TRIM49D1C9J1S8 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.25□□□□□ -2.05
TRIM49D1C9J1S8 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC2.25□□□□□ -2.05
TRIM49D1C9J1S8 RPL37P25-201ENST00000507308 276 ntBASIC2.25□□□□□ -2.05
TRIM49D1C9J1S8 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC2.25□□□□□ -2.05
TRIM49D1C9J1S8 RNU6-390P-201ENST00000516259 103 ntBASIC2.25□□□□□ -2.05
TRIM49D1C9J1S8 RNU6-405P-201ENST00000516637 110 ntBASIC2.25□□□□□ -2.05
TRIM49D1C9J1S8 RNA5SP82-201ENST00000516707 92 ntBASIC2.25□□□□□ -2.05
TRIM49D1C9J1S8 RPL7P20-201ENST00000520308 745 ntBASIC2.25□□□□□ -2.05
TRIM49D1C9J1S8 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC2.25□□□□□ -2.05
TRIM49D1C9J1S8 NDUFAF4P1-201ENST00000559425 519 ntBASIC2.25□□□□□ -2.05
TRIM49D1C9J1S8 AC027176.1-201ENST00000560204 514 ntBASIC2.25□□□□□ -2.05
TRIM49D1C9J1S8 AC103810.1-201ENST00000579873 453 ntBASIC2.25□□□□□ -2.05
TRIM49D1C9J1S8 NRBF2P5-201ENST00000603087 788 ntBASIC2.25□□□□□ -2.05
TRIM49D1C9J1S8 AL161734.1-201ENST00000609720 557 ntBASIC2.25□□□□□ -2.05
TRIM49D1C9J1S8 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.25□□□□□ -2.05
TRIM49D1C9J1S8 AC013562.2-201ENST00000611632 603 ntBASIC2.25□□□□□ -2.05
TRIM49D1C9J1S8 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.25□□□□□ -2.05
TRIM49D1C9J1S8 AC091834.1-201ENST00000614543 472 ntBASIC2.25□□□□□ -2.05
TRIM49D1C9J1S8 AP001506.1-201ENST00000615444 211 ntBASIC2.25□□□□□ -2.05
TRIM49D1C9J1S8 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.25□□□□□ -2.05
TRIM49D1C9J1S8 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
TRIM49D1C9J1S8 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
TRIM49D1C9J1S8 AC010680.1-201ENST00000590024 3590 ntBASIC2.25□□□□□ -2.05
TRIM49D1C9J1S8 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.25□□□□□ -2.05
TRIM49D1C9J1S8 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.25□□□□□ -2.05
TRIM49D1C9J1S8 AC008669.1-201ENST00000565823 2178 ntBASIC2.25□□□□□ -2.05
TRIM49D1C9J1S8 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
TRIM49D1C9J1S8 FTLP6-201ENST00000355274 422 ntBASIC2.24□□□□□ -2.05
TRIM49D1C9J1S8 Y_RNA.3-201ENST00000362331 103 ntBASIC2.24□□□□□ -2.05
TRIM49D1C9J1S8 RNU5A-1-201ENST00000362698 116 ntBASIC2.24□□□□□ -2.05
TRIM49D1C9J1S8 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
TRIM49D1C9J1S8 Y_RNA.517-201ENST00000384551 106 ntBASIC2.24□□□□□ -2.05
TRIM49D1C9J1S8 RNU6-14P-201ENST00000384630 106 ntBASIC2.24□□□□□ -2.05
TRIM49D1C9J1S8 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
TRIM49D1C9J1S8 RPL23AP32-201ENST00000395315 459 ntBASIC2.24□□□□□ -2.05
TRIM49D1C9J1S8 AL663109.1-201ENST00000411498 844 ntBASIC2.24□□□□□ -2.05
TRIM49D1C9J1S8 AC127391.1-201ENST00000411737 98 ntBASIC2.24□□□□□ -2.05
TRIM49D1C9J1S8 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.24□□□□□ -2.05
TRIM49D1C9J1S8 RPL7P37-201ENST00000425095 738 ntBASIC2.24□□□□□ -2.05
TRIM49D1C9J1S8 AC008850.1-201ENST00000427546 362 ntBASIC2.24□□□□□ -2.05
TRIM49D1C9J1S8 CALM2P2-201ENST00000428512 440 ntBASIC2.24□□□□□ -2.05
TRIM49D1C9J1S8 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.24□□□□□ -2.05
TRIM49D1C9J1S8 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.24□□□□□ -2.05
TRIM49D1C9J1S8 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC2.24□□□□□ -2.05
TRIM49D1C9J1S8 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC2.24□□□□□ -2.05
TRIM49D1C9J1S8 USP9YP15-201ENST00000442391 422 ntBASIC2.24□□□□□ -2.05
TRIM49D1C9J1S8 NDUFAF4P4-201ENST00000454883 502 ntBASIC2.24□□□□□ -2.05
TRIM49D1C9J1S8 AC010099.1-201ENST00000455434 375 ntBASIC2.24□□□□□ -2.05
TRIM49D1C9J1S8 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC2.24□□□□□ -2.05
TRIM49D1C9J1S8 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC2.24□□□□□ -2.05
TRIM49D1C9J1S8 RNU7-59P-201ENST00000459101 61 ntBASIC2.24□□□□□ -2.05
TRIM49D1C9J1S8 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC2.24□□□□□ -2.05
TRIM49D1C9J1S8 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC2.24□□□□□ -2.05
TRIM49D1C9J1S8 NRON-201ENST00000517270 370 ntBASIC2.24□□□□□ -2.05
TRIM49D1C9J1S8 RNU6-840P-201ENST00000517275 65 ntBASIC2.24□□□□□ -2.05
TRIM49D1C9J1S8 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC2.24□□□□□ -2.05
TRIM49D1C9J1S8 AC135279.1-201ENST00000543493 504 ntBASIC2.24□□□□□ -2.05
TRIM49D1C9J1S8 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC2.24□□□□□ -2.05
TRIM49D1C9J1S8 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.24□□□□□ -2.05
TRIM49D1C9J1S8 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC2.24□□□□□ -2.05
TRIM49D1C9J1S8 MIR4513-201ENST00000581077 86 ntBASIC2.24□□□□□ -2.05
TRIM49D1C9J1S8 AC073648.5-201ENST00000603502 305 ntBASIC2.24□□□□□ -2.05
TRIM49D1C9J1S8 AC091805.2-201ENST00000603848 235 ntBASIC2.24□□□□□ -2.05
TRIM49D1C9J1S8 AC121334.2-201ENST00000605387 271 ntBASIC2.24□□□□□ -2.05
TRIM49D1C9J1S8 RNU6-87P-201ENST00000607561 108 ntBASIC2.24□□□□□ -2.05
TRIM49D1C9J1S8 AL133173.2-201ENST00000614270 90 ntBASIC2.24□□□□□ -2.05
TRIM49D1C9J1S8 AC010133.1-201ENST00000615809 842 ntBASIC2.24□□□□□ -2.05
TRIM49D1C9J1S8 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
TRIM49D1C9J1S8 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.24□□□□□ -2.05
TRIM49D1C9J1S8 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.24□□□□□ -2.05
TRIM49D1C9J1S8 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.23□□□□□ -2.05
TRIM49D1C9J1S8 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
TRIM49D1C9J1S8 AC135776.4-201ENST00000624300 1904 ntBASIC2.23□□□□□ -2.05
TRIM49D1C9J1S8 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.23□□□□□ -2.05
TRIM49D1C9J1S8 Y_RNA.159-201ENST00000363674 87 ntBASIC2.23□□□□□ -2.05
TRIM49D1C9J1S8 RNU4-91P-201ENST00000364778 135 ntBASIC2.23□□□□□ -2.05
TRIM49D1C9J1S8 Y_RNA.409-201ENST00000383990 98 ntBASIC2.23□□□□□ -2.05
TRIM49D1C9J1S8 MIR1-2-201ENST00000384961 85 ntBASIC2.23□□□□□ -2.05
TRIM49D1C9J1S8 NDUFS5P1-201ENST00000405668 289 ntBASIC2.23□□□□□ -2.05
TRIM49D1C9J1S8 RNU2-16P-201ENST00000410712 136 ntBASIC2.23□□□□□ -2.05
TRIM49D1C9J1S8 ELOCP17-201ENST00000414751 326 ntBASIC2.23□□□□□ -2.05
TRIM49D1C9J1S8 Z85995.1-201ENST00000415547 335 ntBASIC2.23□□□□□ -2.05
TRIM49D1C9J1S8 AC114491.1-201ENST00000416095 246 ntBASIC2.23□□□□□ -2.05
TRIM49D1C9J1S8 MTND3P17-201ENST00000416968 344 ntBASIC2.23□□□□□ -2.05
TRIM49D1C9J1S8 AL353193.1-201ENST00000421444 268 ntBASIC2.23□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms