Protein–RNA interactions for Protein: A8TX70

COL6A5, Collagen alpha-5(VI) chain, humanhuman

Predictions only

Length 2,615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5A8TX70 AC004241.3-201ENST00000611728 517 ntBASIC0.42□□□□□ -2.34
COL6A5A8TX70 AL161423.1-201ENST00000613700 262 ntBASIC0.42□□□□□ -2.34
COL6A5A8TX70 RNY4P27-201ENST00000363341 96 ntBASIC0.42□□□□□ -2.34
COL6A5A8TX70 RSL24D1P8-201ENST00000434442 492 ntBASIC0.42□□□□□ -2.34
COL6A5A8TX70 MTATP6P7-201ENST00000453315 681 ntBASIC0.42□□□□□ -2.34
COL6A5A8TX70 RPS27P23-201ENST00000487608 251 ntBASIC0.42□□□□□ -2.34
COL6A5A8TX70 AC103851.1-201ENST00000506833 274 ntBASIC0.42□□□□□ -2.34
COL6A5A8TX70 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.42□□□□□ -2.34
COL6A5A8TX70 AC004817.2-201ENST00000561794 651 ntBASIC0.42□□□□□ -2.34
COL6A5A8TX70 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC0.42□□□□□ -2.34
COL6A5A8TX70 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC0.42□□□□□ -2.34
COL6A5A8TX70 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC0.42□□□□□ -2.34
COL6A5A8TX70 RNU1-58P-201ENST00000362413 163 ntBASIC0.41□□□□□ -2.34
COL6A5A8TX70 RNU4-67P-201ENST00000364569 141 ntBASIC0.41□□□□□ -2.34
COL6A5A8TX70 RPS4XP3-201ENST00000398541 413 ntBASIC0.41□□□□□ -2.34
COL6A5A8TX70 AL356131.1-201ENST00000405826 414 ntBASIC0.41□□□□□ -2.34
COL6A5A8TX70 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC0.41□□□□□ -2.34
COL6A5A8TX70 ANKRD26P4-201ENST00000455755 950 ntBASIC0.41□□□□□ -2.34
COL6A5A8TX70 NCOR1P1-202ENST00000486162 291 ntBASIC0.41□□□□□ -2.34
COL6A5A8TX70 AC008834.1-201ENST00000511612 175 ntBASIC0.41□□□□□ -2.34
COL6A5A8TX70 AC025465.4-201ENST00000513422 638 ntBASIC0.41□□□□□ -2.34
COL6A5A8TX70 MTCYBP41-201ENST00000528913 1123 ntBASIC0.41□□□□□ -2.34
COL6A5A8TX70 AC068880.5-201ENST00000624331 290 ntBASIC0.41□□□□□ -2.34
COL6A5A8TX70 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC0.41□□□□□ -2.34
COL6A5A8TX70 RNU6-152P-201ENST00000384037 107 ntBASIC0.41□□□□□ -2.34
COL6A5A8TX70 MIR146A-201ENST00000385201 99 ntBASIC0.41□□□□□ -2.34
COL6A5A8TX70 AC006461.1-201ENST00000412637 326 ntBASIC0.41□□□□□ -2.34
COL6A5A8TX70 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC0.41□□□□□ -2.34
COL6A5A8TX70 AC114737.2-201ENST00000421583 173 ntBASIC0.41□□□□□ -2.34
COL6A5A8TX70 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.41□□□□□ -2.34
COL6A5A8TX70 CBX3P3-201ENST00000508108 532 ntBASIC0.41□□□□□ -2.34
COL6A5A8TX70 AC093770.1-201ENST00000511559 571 ntBASIC0.41□□□□□ -2.34
COL6A5A8TX70 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC0.41□□□□□ -2.34
COL6A5A8TX70 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC0.41□□□□□ -2.34
COL6A5A8TX70 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC0.41□□□□□ -2.34
COL6A5A8TX70 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC0.41□□□□□ -2.34
COL6A5A8TX70 AC009712.1-201ENST00000564938 316 ntBASIC0.41□□□□□ -2.34
COL6A5A8TX70 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC0.41□□□□□ -2.34
COL6A5A8TX70 TPTE2P4-201ENST00000258589 1605 ntBASIC0.4□□□□□ -2.34
COL6A5A8TX70 RNU1-72P-201ENST00000362976 153 ntBASIC0.4□□□□□ -2.34
COL6A5A8TX70 Y_RNA.403-201ENST00000383977 101 ntBASIC0.4□□□□□ -2.34
COL6A5A8TX70 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.4□□□□□ -2.34
COL6A5A8TX70 TRAPPC2P4-201ENST00000421750 331 ntBASIC0.4□□□□□ -2.34
COL6A5A8TX70 MTND5P15-201ENST00000434246 349 ntBASIC0.4□□□□□ -2.34
COL6A5A8TX70 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC0.4□□□□□ -2.34
COL6A5A8TX70 RPS24P6-201ENST00000452670 400 ntBASIC0.4□□□□□ -2.34
COL6A5A8TX70 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC0.4□□□□□ -2.34
COL6A5A8TX70 RPL23AP3-201ENST00000453844 468 ntBASIC0.4□□□□□ -2.34
COL6A5A8TX70 HMGN2P9-201ENST00000476875 229 ntBASIC0.4□□□□□ -2.34
COL6A5A8TX70 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC0.4□□□□□ -2.34
COL6A5A8TX70 AC112206.3-201ENST00000514578 389 ntBASIC0.4□□□□□ -2.34
COL6A5A8TX70 RNU6-1073P-201ENST00000517182 106 ntBASIC0.4□□□□□ -2.34
COL6A5A8TX70 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC0.4□□□□□ -2.34
COL6A5A8TX70 AC090115.3-201ENST00000553218 849 ntBASIC0.4□□□□□ -2.34
COL6A5A8TX70 AC025165.5-201ENST00000602802 578 ntBASIC0.4□□□□□ -2.34
COL6A5A8TX70 AC073308.1-201ENST00000623696 305 ntBASIC0.4□□□□□ -2.34
COL6A5A8TX70 RNU6ATAC2P-201ENST00000387943 126 ntBASIC0.4□□□□□ -2.35
COL6A5A8TX70 OR9R1P-201ENST00000412200 877 ntBASIC0.4□□□□□ -2.35
COL6A5A8TX70 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC0.4□□□□□ -2.35
COL6A5A8TX70 AL645638.1-201ENST00000440519 361 ntBASIC0.4□□□□□ -2.35
COL6A5A8TX70 RNU7-157P-201ENST00000459600 66 ntBASIC0.4□□□□□ -2.35
COL6A5A8TX70 RPL31P60-201ENST00000478450 367 ntBASIC0.4□□□□□ -2.35
COL6A5A8TX70 AC074198.2-201ENST00000508153 258 ntBASIC0.4□□□□□ -2.35
COL6A5A8TX70 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC0.4□□□□□ -2.35
COL6A5A8TX70 CIR1P1-201ENST00000524055 1133 ntBASIC0.4□□□□□ -2.35
COL6A5A8TX70 AP003484.1-201ENST00000530974 250 ntBASIC0.4□□□□□ -2.35
COL6A5A8TX70 AC004812.1-201ENST00000540773 146 ntBASIC0.4□□□□□ -2.35
COL6A5A8TX70 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC0.4□□□□□ -2.35
COL6A5A8TX70 MIR5190-201ENST00000581537 80 ntBASIC0.4□□□□□ -2.35
COL6A5A8TX70 MIR6130-201ENST00000619419 109 ntBASIC0.4□□□□□ -2.35
COL6A5A8TX70 AC080100.1-201ENST00000624239 5356 ntBASIC0.4□□□□□ -2.35
COL6A5A8TX70 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC0.39□□□□□ -2.35
COL6A5A8TX70 ZNF29P-201ENST00000225587 168 ntBASIC0.39□□□□□ -2.35
COL6A5A8TX70 AL513475.1-201ENST00000406602 315 ntBASIC0.39□□□□□ -2.35
COL6A5A8TX70 AL590556.1-201ENST00000423231 483 ntBASIC0.39□□□□□ -2.35
COL6A5A8TX70 AL035666.1-201ENST00000446195 348 ntBASIC0.39□□□□□ -2.35
COL6A5A8TX70 KLF3P2-201ENST00000465138 268 ntBASIC0.39□□□□□ -2.35
COL6A5A8TX70 RPL39P28-201ENST00000465655 155 ntBASIC0.39□□□□□ -2.35
COL6A5A8TX70 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC0.39□□□□□ -2.35
COL6A5A8TX70 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC0.39□□□□□ -2.35
COL6A5A8TX70 RNU6-335P-201ENST00000364563 113 ntBASIC0.39□□□□□ -2.35
COL6A5A8TX70 MIR515-2-201ENST00000384883 83 ntBASIC0.39□□□□□ -2.35
COL6A5A8TX70 MIR515-1-201ENST00000384884 83 ntBASIC0.39□□□□□ -2.35
COL6A5A8TX70 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC0.39□□□□□ -2.35
COL6A5A8TX70 RABEPKP1-201ENST00000440529 1026 ntBASIC0.39□□□□□ -2.35
COL6A5A8TX70 SETP11-201ENST00000473027 690 ntBASIC0.39□□□□□ -2.35
COL6A5A8TX70 AC087879.1-201ENST00000474343 374 ntBASIC0.39□□□□□ -2.35
COL6A5A8TX70 RRN3P3-201ENST00000549207 578 ntBASIC0.39□□□□□ -2.35
COL6A5A8TX70 LINC02211-204ENST00000642024 1070 ntBASIC0.39□□□□□ -2.35
COL6A5A8TX70 MRPL35P3-201ENST00000421557 364 ntBASIC0.38□□□□□ -2.35
COL6A5A8TX70 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC0.38□□□□□ -2.35
COL6A5A8TX70 AC245047.4-201ENST00000433189 144 ntBASIC0.38□□□□□ -2.35
COL6A5A8TX70 RPL23AP33-201ENST00000442301 452 ntBASIC0.38□□□□□ -2.35
COL6A5A8TX70 TRAPPC2P3-201ENST00000443200 321 ntBASIC0.38□□□□□ -2.35
COL6A5A8TX70 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC0.38□□□□□ -2.35
COL6A5A8TX70 RPL22P13-201ENST00000493291 347 ntBASIC0.38□□□□□ -2.35
COL6A5A8TX70 AC011406.1-201ENST00000512440 370 ntBASIC0.38□□□□□ -2.35
COL6A5A8TX70 MIR4299-201ENST00000577899 72 ntBASIC0.38□□□□□ -2.35
COL6A5A8TX70 AC090616.5-202ENST00000582111 297 ntBASIC0.38□□□□□ -2.35
COL6A5A8TX70 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC0.38□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 120.5 ms