Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC29.4■■■□□ 2.3
CDK11AQ9UQ88 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
CDK11AQ9UQ88 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC29.4■■■□□ 2.3
CDK11AQ9UQ88 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
CDK11AQ9UQ88 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
CDK11AQ9UQ88 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
CDK11AQ9UQ88 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
CDK11AQ9UQ88 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC29.4■■■□□ 2.3
CDK11AQ9UQ88 RN7SL510P-201ENST00000581311 263 ntBASIC29.4■■■□□ 2.3
CDK11AQ9UQ88 SPEG-225ENST00000617028 815 ntTSL 5 BASIC29.4■■■□□ 2.3
CDK11AQ9UQ88 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC29.4■■■□□ 2.3
CDK11AQ9UQ88 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC29.4■■■□□ 2.3
CDK11AQ9UQ88 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
CDK11AQ9UQ88 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
CDK11AQ9UQ88 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC29.4■■■□□ 2.3
CDK11AQ9UQ88 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC29.4■■■□□ 2.3
CDK11AQ9UQ88 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC29.39■■■□□ 2.3
CDK11AQ9UQ88 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC29.39■■■□□ 2.3
CDK11AQ9UQ88 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC29.39■■■□□ 2.3
CDK11AQ9UQ88 AC111152.3-201ENST00000569699 673 ntBASIC29.39■■■□□ 2.3
CDK11AQ9UQ88 MIR3917-201ENST00000580971 93 ntBASIC29.39■■■□□ 2.3
CDK11AQ9UQ88 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC29.39■■■□□ 2.3
CDK11AQ9UQ88 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC29.39■■■□□ 2.3
CDK11AQ9UQ88 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
CDK11AQ9UQ88 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC29.39■■■□□ 2.3
CDK11AQ9UQ88 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC29.39■■■□□ 2.3
CDK11AQ9UQ88 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC29.39■■■□□ 2.3
CDK11AQ9UQ88 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.29
CDK11AQ9UQ88 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC29.39■■■□□ 2.29
CDK11AQ9UQ88 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC29.39■■■□□ 2.29
CDK11AQ9UQ88 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
CDK11AQ9UQ88 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC29.38■■■□□ 2.29
CDK11AQ9UQ88 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC29.38■■■□□ 2.29
CDK11AQ9UQ88 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
CDK11AQ9UQ88 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
CDK11AQ9UQ88 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
CDK11AQ9UQ88 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
CDK11AQ9UQ88 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC29.38■■■□□ 2.29
CDK11AQ9UQ88 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC29.38■■■□□ 2.29
CDK11AQ9UQ88 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC29.38■■■□□ 2.29
CDK11AQ9UQ88 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC29.38■■■□□ 2.29
CDK11AQ9UQ88 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC29.38■■■□□ 2.29
CDK11AQ9UQ88 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC29.38■■■□□ 2.29
CDK11AQ9UQ88 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC29.38■■■□□ 2.29
CDK11AQ9UQ88 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC29.38■■■□□ 2.29
CDK11AQ9UQ88 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
CDK11AQ9UQ88 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
CDK11AQ9UQ88 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC29.38■■■□□ 2.29
CDK11AQ9UQ88 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC29.38■■■□□ 2.29
CDK11AQ9UQ88 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC29.38■■■□□ 2.29
CDK11AQ9UQ88 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
CDK11AQ9UQ88 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
CDK11AQ9UQ88 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
CDK11AQ9UQ88 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC29.37■■■□□ 2.29
CDK11AQ9UQ88 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC29.37■■■□□ 2.29
CDK11AQ9UQ88 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
CDK11AQ9UQ88 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
CDK11AQ9UQ88 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
CDK11AQ9UQ88 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
CDK11AQ9UQ88 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
CDK11AQ9UQ88 MIR662-201ENST00000384847 95 ntBASIC29.37■■■□□ 2.29
CDK11AQ9UQ88 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC29.37■■■□□ 2.29
CDK11AQ9UQ88 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC29.37■■■□□ 2.29
CDK11AQ9UQ88 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC29.37■■■□□ 2.29
CDK11AQ9UQ88 AL157888.1-201ENST00000631930 593 ntBASIC29.37■■■□□ 2.29
CDK11AQ9UQ88 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC29.37■■■□□ 2.29
CDK11AQ9UQ88 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
CDK11AQ9UQ88 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC29.37■■■□□ 2.29
CDK11AQ9UQ88 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
CDK11AQ9UQ88 USP39-204ENST00000409766 2033 ntTSL 2 BASIC29.37■■■□□ 2.29
CDK11AQ9UQ88 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
CDK11AQ9UQ88 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
CDK11AQ9UQ88 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
CDK11AQ9UQ88 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
CDK11AQ9UQ88 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
CDK11AQ9UQ88 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC29.36■■■□□ 2.29
CDK11AQ9UQ88 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
CDK11AQ9UQ88 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
CDK11AQ9UQ88 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC29.36■■■□□ 2.29
CDK11AQ9UQ88 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
CDK11AQ9UQ88 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
CDK11AQ9UQ88 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC29.36■■■□□ 2.29
CDK11AQ9UQ88 AL136038.4-201ENST00000603606 1261 ntBASIC29.36■■■□□ 2.29
CDK11AQ9UQ88 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC29.36■■■□□ 2.29
CDK11AQ9UQ88 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
CDK11AQ9UQ88 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC29.36■■■□□ 2.29
CDK11AQ9UQ88 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
CDK11AQ9UQ88 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC29.36■■■□□ 2.29
CDK11AQ9UQ88 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC29.36■■■□□ 2.29
CDK11AQ9UQ88 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
CDK11AQ9UQ88 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC29.36■■■□□ 2.29
CDK11AQ9UQ88 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC29.35■■■□□ 2.29
CDK11AQ9UQ88 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC29.35■■■□□ 2.29
CDK11AQ9UQ88 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC29.35■■■□□ 2.29
CDK11AQ9UQ88 CHCHD2P8-201ENST00000429873 447 ntBASIC29.35■■■□□ 2.29
CDK11AQ9UQ88 NUS1P1-201ENST00000446295 882 ntBASIC29.35■■■□□ 2.29
CDK11AQ9UQ88 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC29.35■■■□□ 2.29
CDK11AQ9UQ88 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC29.35■■■□□ 2.29
CDK11AQ9UQ88 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC29.35■■■□□ 2.29
CDK11AQ9UQ88 NAA38-203ENST00000575071 553 ntTSL 2 BASIC29.35■■■□□ 2.29
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms