Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
SH3KBP1Q96B97 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SH3KBP1Q96B97 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SH3KBP1Q96B97 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SH3KBP1Q96B97 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
SH3KBP1Q96B97 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SH3KBP1Q96B97 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
SH3KBP1Q96B97 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC18.84■□□□□ 0.61
SH3KBP1Q96B97 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC18.84■□□□□ 0.61
SH3KBP1Q96B97 AC097488.1-201ENST00000507834 756 ntBASIC18.84■□□□□ 0.61
SH3KBP1Q96B97 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SH3KBP1Q96B97 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC18.84■□□□□ 0.61
SH3KBP1Q96B97 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC18.84■□□□□ 0.61
SH3KBP1Q96B97 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC18.84■□□□□ 0.61
SH3KBP1Q96B97 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC18.84■□□□□ 0.61
SH3KBP1Q96B97 AP000692.2-201ENST00000608391 879 ntBASIC18.84■□□□□ 0.61
SH3KBP1Q96B97 AC011298.2-201ENST00000617989 482 ntBASIC18.84■□□□□ 0.61
SH3KBP1Q96B97 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
SH3KBP1Q96B97 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SH3KBP1Q96B97 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SH3KBP1Q96B97 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SH3KBP1Q96B97 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
SH3KBP1Q96B97 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.84■□□□□ 0.61
SH3KBP1Q96B97 RCC2P6-201ENST00000526625 1557 ntBASIC18.84■□□□□ 0.61
SH3KBP1Q96B97 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SH3KBP1Q96B97 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.84■□□□□ 0.61
SH3KBP1Q96B97 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SH3KBP1Q96B97 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SH3KBP1Q96B97 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC18.83■□□□□ 0.61
SH3KBP1Q96B97 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SH3KBP1Q96B97 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SH3KBP1Q96B97 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SH3KBP1Q96B97 LINC01568-207ENST00000641790 1380 ntBASIC18.83■□□□□ 0.61
SH3KBP1Q96B97 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SH3KBP1Q96B97 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.61
SH3KBP1Q96B97 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.83■□□□□ 0.61
SH3KBP1Q96B97 KRT18P22-201ENST00000402024 1347 ntBASIC18.83■□□□□ 0.61
SH3KBP1Q96B97 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.61
SH3KBP1Q96B97 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SH3KBP1Q96B97 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SH3KBP1Q96B97 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SH3KBP1Q96B97 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
SH3KBP1Q96B97 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SH3KBP1Q96B97 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
SH3KBP1Q96B97 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC18.83■□□□□ 0.6
SH3KBP1Q96B97 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.83■□□□□ 0.6
SH3KBP1Q96B97 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC18.83■□□□□ 0.6
SH3KBP1Q96B97 AL160286.2-201ENST00000567150 934 ntBASIC18.83■□□□□ 0.6
SH3KBP1Q96B97 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC18.83■□□□□ 0.6
SH3KBP1Q96B97 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.83■□□□□ 0.6
SH3KBP1Q96B97 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SH3KBP1Q96B97 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
SH3KBP1Q96B97 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SH3KBP1Q96B97 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.83■□□□□ 0.6
SH3KBP1Q96B97 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.83■□□□□ 0.6
SH3KBP1Q96B97 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SH3KBP1Q96B97 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18.83■□□□□ 0.6
SH3KBP1Q96B97 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SH3KBP1Q96B97 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
SH3KBP1Q96B97 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SH3KBP1Q96B97 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
SH3KBP1Q96B97 AC087289.5-201ENST00000586076 3175 ntBASIC18.82■□□□□ 0.6
SH3KBP1Q96B97 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SH3KBP1Q96B97 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.82■□□□□ 0.6
SH3KBP1Q96B97 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
SH3KBP1Q96B97 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC18.82■□□□□ 0.6
SH3KBP1Q96B97 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC18.82■□□□□ 0.6
SH3KBP1Q96B97 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC18.82■□□□□ 0.6
SH3KBP1Q96B97 AL390955.1-201ENST00000428694 934 ntBASIC18.82■□□□□ 0.6
SH3KBP1Q96B97 GLRB-205ENST00000512619 728 ntTSL 3 BASIC18.82■□□□□ 0.6
SH3KBP1Q96B97 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
SH3KBP1Q96B97 PPOX-219ENST00000544598 813 ntTSL 2 BASIC18.82■□□□□ 0.6
SH3KBP1Q96B97 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.82■□□□□ 0.6
SH3KBP1Q96B97 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC18.82■□□□□ 0.6
SH3KBP1Q96B97 AC005363.2-201ENST00000618631 242 ntBASIC18.82■□□□□ 0.6
SH3KBP1Q96B97 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SH3KBP1Q96B97 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.82■□□□□ 0.6
SH3KBP1Q96B97 AC090340.1-201ENST00000620778 4980 ntBASIC18.82■□□□□ 0.6
SH3KBP1Q96B97 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.82■□□□□ 0.6
SH3KBP1Q96B97 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.82■□□□□ 0.6
SH3KBP1Q96B97 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SH3KBP1Q96B97 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
SH3KBP1Q96B97 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SH3KBP1Q96B97 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SH3KBP1Q96B97 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SH3KBP1Q96B97 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.81■□□□□ 0.6
SH3KBP1Q96B97 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SH3KBP1Q96B97 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SH3KBP1Q96B97 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
SH3KBP1Q96B97 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
SH3KBP1Q96B97 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SH3KBP1Q96B97 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
SH3KBP1Q96B97 CRYGFP-201ENST00000418459 633 ntBASIC18.81■□□□□ 0.6
SH3KBP1Q96B97 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SH3KBP1Q96B97 FAM207BP-201ENST00000447172 505 ntBASIC18.81■□□□□ 0.6
SH3KBP1Q96B97 KRT18P21-201ENST00000515767 1272 ntBASIC18.81■□□□□ 0.6
SH3KBP1Q96B97 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC18.81■□□□□ 0.6
SH3KBP1Q96B97 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SH3KBP1Q96B97 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.81■□□□□ 0.6
SH3KBP1Q96B97 SLC25A1P4-201ENST00000567977 778 ntBASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms