Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Ccdc9Q8VC31 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
Ccdc9Q8VC31 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ccdc9Q8VC31 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ccdc9Q8VC31 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ccdc9Q8VC31 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Ccdc9Q8VC31 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC19.59■□□□□ 0.73
Ccdc9Q8VC31 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ccdc9Q8VC31 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ccdc9Q8VC31 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC19.59■□□□□ 0.73
Ccdc9Q8VC31 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC19.59■□□□□ 0.73
Ccdc9Q8VC31 Gm42642-201ENSMUST00000200683 355 ntBASIC19.59■□□□□ 0.73
Ccdc9Q8VC31 Gm10033-202ENSMUST00000211874 928 ntBASIC19.59■□□□□ 0.73
Ccdc9Q8VC31 Gm18671-201ENSMUST00000214826 683 ntBASIC19.59■□□□□ 0.73
Ccdc9Q8VC31 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ccdc9Q8VC31 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
Ccdc9Q8VC31 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ccdc9Q8VC31 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ccdc9Q8VC31 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ccdc9Q8VC31 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ccdc9Q8VC31 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Ccdc9Q8VC31 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Ccdc9Q8VC31 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ccdc9Q8VC31 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Ccdc9Q8VC31 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ccdc9Q8VC31 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ccdc9Q8VC31 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ccdc9Q8VC31 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ccdc9Q8VC31 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
Ccdc9Q8VC31 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ccdc9Q8VC31 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
Ccdc9Q8VC31 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ccdc9Q8VC31 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ccdc9Q8VC31 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ccdc9Q8VC31 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ccdc9Q8VC31 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ccdc9Q8VC31 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ccdc9Q8VC31 Gm8495-201ENSMUST00000188740 694 ntBASIC19.58■□□□□ 0.72
Ccdc9Q8VC31 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC19.58■□□□□ 0.72
Ccdc9Q8VC31 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Ccdc9Q8VC31 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ccdc9Q8VC31 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ccdc9Q8VC31 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ccdc9Q8VC31 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ccdc9Q8VC31 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ccdc9Q8VC31 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Ccdc9Q8VC31 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Ccdc9Q8VC31 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Ccdc9Q8VC31 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC19.58■□□□□ 0.72
Ccdc9Q8VC31 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Ccdc9Q8VC31 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ccdc9Q8VC31 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ccdc9Q8VC31 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ccdc9Q8VC31 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ccdc9Q8VC31 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ccdc9Q8VC31 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ccdc9Q8VC31 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC19.57■□□□□ 0.72
Ccdc9Q8VC31 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ccdc9Q8VC31 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC19.57■□□□□ 0.72
Ccdc9Q8VC31 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ccdc9Q8VC31 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ccdc9Q8VC31 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ccdc9Q8VC31 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ccdc9Q8VC31 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ccdc9Q8VC31 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ccdc9Q8VC31 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ccdc9Q8VC31 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ccdc9Q8VC31 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Ccdc9Q8VC31 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ccdc9Q8VC31 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ccdc9Q8VC31 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ccdc9Q8VC31 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ccdc9Q8VC31 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Ccdc9Q8VC31 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Ccdc9Q8VC31 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ccdc9Q8VC31 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ccdc9Q8VC31 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ccdc9Q8VC31 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ccdc9Q8VC31 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Ccdc9Q8VC31 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ccdc9Q8VC31 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Ccdc9Q8VC31 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC19.56■□□□□ 0.72
Ccdc9Q8VC31 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Ccdc9Q8VC31 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ccdc9Q8VC31 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ccdc9Q8VC31 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ccdc9Q8VC31 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ccdc9Q8VC31 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC19.55■□□□□ 0.72
Ccdc9Q8VC31 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ccdc9Q8VC31 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Ccdc9Q8VC31 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ccdc9Q8VC31 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC19.55■□□□□ 0.72
Ccdc9Q8VC31 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Ccdc9Q8VC31 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Ccdc9Q8VC31 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Ccdc9Q8VC31 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ccdc9Q8VC31 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ccdc9Q8VC31 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ccdc9Q8VC31 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ccdc9Q8VC31 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC19.55■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms