Protein–RNA interactions for Protein: Q8IZU3

SYCP3, Synaptonemal complex protein 3, humanhuman

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP3Q8IZU3 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
SYCP3Q8IZU3 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC21.01■□□□□ 0.95
SYCP3Q8IZU3 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC21■□□□□ 0.95
SYCP3Q8IZU3 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC21■□□□□ 0.95
SYCP3Q8IZU3 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SYCP3Q8IZU3 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC21■□□□□ 0.95
SYCP3Q8IZU3 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC21■□□□□ 0.95
SYCP3Q8IZU3 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SYCP3Q8IZU3 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SYCP3Q8IZU3 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SYCP3Q8IZU3 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
SYCP3Q8IZU3 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC21■□□□□ 0.95
SYCP3Q8IZU3 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC21■□□□□ 0.95
SYCP3Q8IZU3 TSPY23P-201ENST00000440136 739 ntBASIC21■□□□□ 0.95
SYCP3Q8IZU3 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC21■□□□□ 0.95
SYCP3Q8IZU3 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC21■□□□□ 0.95
SYCP3Q8IZU3 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC21■□□□□ 0.95
SYCP3Q8IZU3 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SYCP3Q8IZU3 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC21■□□□□ 0.95
SYCP3Q8IZU3 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
SYCP3Q8IZU3 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC21■□□□□ 0.95
SYCP3Q8IZU3 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
SYCP3Q8IZU3 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC21■□□□□ 0.95
SYCP3Q8IZU3 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC20.99■□□□□ 0.95
SYCP3Q8IZU3 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SYCP3Q8IZU3 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SYCP3Q8IZU3 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SYCP3Q8IZU3 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.99■□□□□ 0.95
SYCP3Q8IZU3 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC20.99■□□□□ 0.95
SYCP3Q8IZU3 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC20.99■□□□□ 0.95
SYCP3Q8IZU3 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC20.99■□□□□ 0.95
SYCP3Q8IZU3 FAM207BP-201ENST00000447172 505 ntBASIC20.99■□□□□ 0.95
SYCP3Q8IZU3 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC20.99■□□□□ 0.95
SYCP3Q8IZU3 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SYCP3Q8IZU3 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC20.99■□□□□ 0.95
SYCP3Q8IZU3 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC20.99■□□□□ 0.95
SYCP3Q8IZU3 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC20.99■□□□□ 0.95
SYCP3Q8IZU3 MIR4785-201ENST00000585005 73 ntBASIC20.99■□□□□ 0.95
SYCP3Q8IZU3 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC20.99■□□□□ 0.95
SYCP3Q8IZU3 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC20.99■□□□□ 0.95
SYCP3Q8IZU3 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SYCP3Q8IZU3 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SYCP3Q8IZU3 IRX1P1-201ENST00000438849 1838 ntBASIC20.99■□□□□ 0.95
SYCP3Q8IZU3 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SYCP3Q8IZU3 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC20.99■□□□□ 0.95
SYCP3Q8IZU3 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SYCP3Q8IZU3 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SYCP3Q8IZU3 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC20.98■□□□□ 0.95
SYCP3Q8IZU3 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SYCP3Q8IZU3 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SYCP3Q8IZU3 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SYCP3Q8IZU3 AL161938.1-201ENST00000569833 2180 ntBASIC20.98■□□□□ 0.95
SYCP3Q8IZU3 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SYCP3Q8IZU3 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SYCP3Q8IZU3 AC008040.2-201ENST00000461049 708 ntBASIC20.98■□□□□ 0.95
SYCP3Q8IZU3 AC116562.2-201ENST00000507042 360 ntBASIC20.98■□□□□ 0.95
SYCP3Q8IZU3 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC20.98■□□□□ 0.95
SYCP3Q8IZU3 AP003071.4-201ENST00000562276 1284 ntBASIC20.98■□□□□ 0.95
SYCP3Q8IZU3 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC20.98■□□□□ 0.95
SYCP3Q8IZU3 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC20.98■□□□□ 0.95
SYCP3Q8IZU3 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
SYCP3Q8IZU3 GOLGA6L5P-202ENST00000515341 1828 ntBASIC20.98■□□□□ 0.95
SYCP3Q8IZU3 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SYCP3Q8IZU3 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
SYCP3Q8IZU3 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC20.98■□□□□ 0.95
SYCP3Q8IZU3 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
SYCP3Q8IZU3 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SYCP3Q8IZU3 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC20.97■□□□□ 0.95
SYCP3Q8IZU3 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.97■□□□□ 0.95
SYCP3Q8IZU3 FP475955.4-201ENST00000623131 1990 ntBASIC20.97■□□□□ 0.95
SYCP3Q8IZU3 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SYCP3Q8IZU3 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SYCP3Q8IZU3 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SYCP3Q8IZU3 KRT8P11-201ENST00000409686 1436 ntBASIC20.97■□□□□ 0.95
SYCP3Q8IZU3 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
SYCP3Q8IZU3 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC20.97■□□□□ 0.95
SYCP3Q8IZU3 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SYCP3Q8IZU3 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC20.97■□□□□ 0.95
SYCP3Q8IZU3 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SYCP3Q8IZU3 MESTP1-201ENST00000404287 994 ntBASIC20.97■□□□□ 0.95
SYCP3Q8IZU3 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC20.97■□□□□ 0.95
SYCP3Q8IZU3 DHDH-203ENST00000522614 776 ntTSL 5 BASIC20.97■□□□□ 0.95
SYCP3Q8IZU3 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC20.97■□□□□ 0.95
SYCP3Q8IZU3 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SYCP3Q8IZU3 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SYCP3Q8IZU3 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC20.97■□□□□ 0.95
SYCP3Q8IZU3 REXO1L10P-201ENST00000615707 1290 ntBASIC20.97■□□□□ 0.95
SYCP3Q8IZU3 REXO1L12P-201ENST00000622156 912 ntBASIC20.97■□□□□ 0.95
SYCP3Q8IZU3 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
SYCP3Q8IZU3 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SYCP3Q8IZU3 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SYCP3Q8IZU3 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SYCP3Q8IZU3 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC20.97■□□□□ 0.95
SYCP3Q8IZU3 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
SYCP3Q8IZU3 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SYCP3Q8IZU3 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC20.97■□□□□ 0.95
SYCP3Q8IZU3 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SYCP3Q8IZU3 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC20.97■□□□□ 0.95
SYCP3Q8IZU3 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC20.97■□□□□ 0.95
SYCP3Q8IZU3 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms