Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Casc4Q6P2L7 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Casc4Q6P2L7 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Casc4Q6P2L7 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Casc4Q6P2L7 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Casc4Q6P2L7 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC16.42■□□□□ 0.22
Casc4Q6P2L7 Gm7284-201ENSMUST00000131667 944 ntBASIC16.42■□□□□ 0.22
Casc4Q6P2L7 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC16.42■□□□□ 0.22
Casc4Q6P2L7 Gm45328-201ENSMUST00000210942 917 ntBASIC16.42■□□□□ 0.22
Casc4Q6P2L7 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Casc4Q6P2L7 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC16.42■□□□□ 0.22
Casc4Q6P2L7 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Casc4Q6P2L7 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Casc4Q6P2L7 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Casc4Q6P2L7 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Casc4Q6P2L7 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Casc4Q6P2L7 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Casc4Q6P2L7 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Casc4Q6P2L7 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Casc4Q6P2L7 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Casc4Q6P2L7 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Casc4Q6P2L7 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Casc4Q6P2L7 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Casc4Q6P2L7 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Casc4Q6P2L7 Zkscan3-208ENSMUST00000224820 5398 ntBASIC16.41■□□□□ 0.22
Casc4Q6P2L7 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Casc4Q6P2L7 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Casc4Q6P2L7 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC16.41■□□□□ 0.22
Casc4Q6P2L7 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Casc4Q6P2L7 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Casc4Q6P2L7 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Casc4Q6P2L7 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Casc4Q6P2L7 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC16.41■□□□□ 0.22
Casc4Q6P2L7 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Casc4Q6P2L7 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Casc4Q6P2L7 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Casc4Q6P2L7 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Casc4Q6P2L7 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Casc4Q6P2L7 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Casc4Q6P2L7 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Casc4Q6P2L7 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Casc4Q6P2L7 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Casc4Q6P2L7 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Casc4Q6P2L7 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Casc4Q6P2L7 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Casc4Q6P2L7 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Casc4Q6P2L7 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC16.4■□□□□ 0.22
Casc4Q6P2L7 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC16.4■□□□□ 0.22
Casc4Q6P2L7 Gm7367-201ENSMUST00000057611 492 ntBASIC16.4■□□□□ 0.22
Casc4Q6P2L7 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Casc4Q6P2L7 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Casc4Q6P2L7 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Casc4Q6P2L7 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Casc4Q6P2L7 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Casc4Q6P2L7 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Casc4Q6P2L7 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Casc4Q6P2L7 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC16.4■□□□□ 0.22
Casc4Q6P2L7 Gm15442-201ENSMUST00000117905 1527 ntBASIC16.4■□□□□ 0.22
Casc4Q6P2L7 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Casc4Q6P2L7 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Casc4Q6P2L7 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC16.39■□□□□ 0.21
Casc4Q6P2L7 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Casc4Q6P2L7 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Casc4Q6P2L7 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Casc4Q6P2L7 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Casc4Q6P2L7 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC16.39■□□□□ 0.21
Casc4Q6P2L7 Ighv6-1-201ENSMUST00000193612 343 ntBASIC16.39■□□□□ 0.21
Casc4Q6P2L7 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Casc4Q6P2L7 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Casc4Q6P2L7 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Casc4Q6P2L7 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Casc4Q6P2L7 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Casc4Q6P2L7 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Casc4Q6P2L7 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Casc4Q6P2L7 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Casc4Q6P2L7 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
Casc4Q6P2L7 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Casc4Q6P2L7 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC16.38■□□□□ 0.21
Casc4Q6P2L7 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Casc4Q6P2L7 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Casc4Q6P2L7 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Casc4Q6P2L7 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Casc4Q6P2L7 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Casc4Q6P2L7 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Casc4Q6P2L7 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC16.38■□□□□ 0.21
Casc4Q6P2L7 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC16.38■□□□□ 0.21
Casc4Q6P2L7 Gm14859-201ENSMUST00000117752 357 ntBASIC16.38■□□□□ 0.21
Casc4Q6P2L7 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Casc4Q6P2L7 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Casc4Q6P2L7 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Casc4Q6P2L7 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
Casc4Q6P2L7 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Casc4Q6P2L7 AC154471.1-201ENSMUST00000224418 436 ntBASIC16.38■□□□□ 0.21
Casc4Q6P2L7 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Casc4Q6P2L7 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Casc4Q6P2L7 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
Casc4Q6P2L7 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Casc4Q6P2L7 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC16.38■□□□□ 0.21
Casc4Q6P2L7 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Casc4Q6P2L7 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms