Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tpm1P58771 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tpm1P58771 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tpm1P58771 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tpm1P58771 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tpm1P58771 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tpm1P58771 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tpm1P58771 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
Tpm1P58771 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC18.13■□□□□ 0.49
Tpm1P58771 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC18.13■□□□□ 0.49
Tpm1P58771 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tpm1P58771 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Tpm1P58771 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tpm1P58771 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tpm1P58771 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tpm1P58771 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Tpm1P58771 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC18.13■□□□□ 0.49
Tpm1P58771 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tpm1P58771 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tpm1P58771 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tpm1P58771 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tpm1P58771 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tpm1P58771 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tpm1P58771 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tpm1P58771 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tpm1P58771 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tpm1P58771 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tpm1P58771 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Tpm1P58771 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tpm1P58771 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Tpm1P58771 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tpm1P58771 Gm20049-201ENSMUST00000219950 730 ntBASIC18.12■□□□□ 0.49
Tpm1P58771 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tpm1P58771 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tpm1P58771 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Tpm1P58771 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Tpm1P58771 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tpm1P58771 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tpm1P58771 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC18.12■□□□□ 0.49
Tpm1P58771 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tpm1P58771 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tpm1P58771 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tpm1P58771 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tpm1P58771 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tpm1P58771 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Tpm1P58771 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Tpm1P58771 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tpm1P58771 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Tpm1P58771 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Tpm1P58771 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Tpm1P58771 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tpm1P58771 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tpm1P58771 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tpm1P58771 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tpm1P58771 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tpm1P58771 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Tpm1P58771 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tpm1P58771 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tpm1P58771 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tpm1P58771 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC18.11■□□□□ 0.49
Tpm1P58771 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Tpm1P58771 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Tpm1P58771 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tpm1P58771 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tpm1P58771 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Tpm1P58771 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tpm1P58771 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Tpm1P58771 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC18.1■□□□□ 0.49
Tpm1P58771 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC18.1■□□□□ 0.49
Tpm1P58771 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
Tpm1P58771 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tpm1P58771 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tpm1P58771 Prob1-201ENSMUST00000097619 3021 ntBASIC18.1■□□□□ 0.49
Tpm1P58771 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Tpm1P58771 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tpm1P58771 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tpm1P58771 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Tpm1P58771 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tpm1P58771 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Tpm1P58771 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tpm1P58771 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tpm1P58771 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tpm1P58771 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tpm1P58771 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tpm1P58771 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Tpm1P58771 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tpm1P58771 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tpm1P58771 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Tpm1P58771 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tpm1P58771 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tpm1P58771 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tpm1P58771 AC120002.2-201ENSMUST00000220205 773 ntBASIC18.09■□□□□ 0.49
Tpm1P58771 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tpm1P58771 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tpm1P58771 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tpm1P58771 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
Tpm1P58771 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tpm1P58771 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Tpm1P58771 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Tpm1P58771 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms