Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
GdnfP48540 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
GdnfP48540 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
GdnfP48540 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
GdnfP48540 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
GdnfP48540 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC14.22□□□□□ -0.13
GdnfP48540 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
GdnfP48540 Gm44616-201ENSMUST00000206417 1732 ntBASIC14.22□□□□□ -0.13
GdnfP48540 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
GdnfP48540 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
GdnfP48540 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
GdnfP48540 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
GdnfP48540 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
GdnfP48540 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
GdnfP48540 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
GdnfP48540 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
GdnfP48540 AC115863.1-201ENSMUST00000214815 1813 ntBASIC14.22□□□□□ -0.13
GdnfP48540 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
GdnfP48540 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
GdnfP48540 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
GdnfP48540 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC14.22□□□□□ -0.13
GdnfP48540 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
GdnfP48540 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
GdnfP48540 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
GdnfP48540 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
GdnfP48540 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
GdnfP48540 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
GdnfP48540 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
GdnfP48540 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
GdnfP48540 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
GdnfP48540 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
GdnfP48540 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
GdnfP48540 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
GdnfP48540 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
GdnfP48540 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
GdnfP48540 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
GdnfP48540 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
GdnfP48540 Gm20472-201ENSMUST00000174403 1240 ntBASIC14.21□□□□□ -0.13
GdnfP48540 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
GdnfP48540 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
GdnfP48540 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
GdnfP48540 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
GdnfP48540 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
GdnfP48540 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
GdnfP48540 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
GdnfP48540 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
GdnfP48540 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
GdnfP48540 AL590614.2-201ENSMUST00000225374 1937 ntBASIC14.21□□□□□ -0.14
GdnfP48540 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
GdnfP48540 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
GdnfP48540 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
GdnfP48540 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
GdnfP48540 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
GdnfP48540 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
GdnfP48540 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
GdnfP48540 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
GdnfP48540 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
GdnfP48540 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
GdnfP48540 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
GdnfP48540 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
GdnfP48540 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC14.2□□□□□ -0.14
GdnfP48540 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
GdnfP48540 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
GdnfP48540 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
GdnfP48540 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
GdnfP48540 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
GdnfP48540 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
GdnfP48540 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
GdnfP48540 Gm37025-201ENSMUST00000195159 829 ntBASIC14.2□□□□□ -0.14
GdnfP48540 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
GdnfP48540 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
GdnfP48540 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
GdnfP48540 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
GdnfP48540 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
GdnfP48540 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
GdnfP48540 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
GdnfP48540 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
GdnfP48540 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
GdnfP48540 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
GdnfP48540 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
GdnfP48540 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
GdnfP48540 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
GdnfP48540 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
GdnfP48540 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
GdnfP48540 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
GdnfP48540 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GdnfP48540 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
GdnfP48540 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
GdnfP48540 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
GdnfP48540 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
GdnfP48540 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
GdnfP48540 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC14.19□□□□□ -0.14
GdnfP48540 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GdnfP48540 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
GdnfP48540 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
GdnfP48540 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
GdnfP48540 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GdnfP48540 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GdnfP48540 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
GdnfP48540 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms