Protein–RNA interactions for Protein: O88890

Sh2d1a, SH2 domain-containing protein 1A, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d1aO88890 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sh2d1aO88890 Mir6982-201ENSMUST00000184354 68 ntBASIC11.5□□□□□ -0.57
Sh2d1aO88890 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Sh2d1aO88890 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Sh2d1aO88890 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Sh2d1aO88890 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Sh2d1aO88890 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sh2d1aO88890 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sh2d1aO88890 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC11.5□□□□□ -0.57
Sh2d1aO88890 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Sh2d1aO88890 Phf7-203ENSMUST00000226565 1971 ntBASIC11.5□□□□□ -0.57
Sh2d1aO88890 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Sh2d1aO88890 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC11.5□□□□□ -0.57
Sh2d1aO88890 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Sh2d1aO88890 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sh2d1aO88890 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC11.49□□□□□ -0.57
Sh2d1aO88890 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sh2d1aO88890 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sh2d1aO88890 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sh2d1aO88890 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sh2d1aO88890 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sh2d1aO88890 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Sh2d1aO88890 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Sh2d1aO88890 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Sh2d1aO88890 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sh2d1aO88890 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sh2d1aO88890 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sh2d1aO88890 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sh2d1aO88890 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC11.49□□□□□ -0.57
Sh2d1aO88890 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC11.49□□□□□ -0.57
Sh2d1aO88890 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sh2d1aO88890 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sh2d1aO88890 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sh2d1aO88890 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sh2d1aO88890 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sh2d1aO88890 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sh2d1aO88890 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sh2d1aO88890 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Sh2d1aO88890 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Sh2d1aO88890 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Sh2d1aO88890 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sh2d1aO88890 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Sh2d1aO88890 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Sh2d1aO88890 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sh2d1aO88890 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Sh2d1aO88890 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Sh2d1aO88890 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sh2d1aO88890 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sh2d1aO88890 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sh2d1aO88890 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sh2d1aO88890 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sh2d1aO88890 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sh2d1aO88890 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sh2d1aO88890 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sh2d1aO88890 Gm15565-201ENSMUST00000118890 427 ntBASIC11.48□□□□□ -0.57
Sh2d1aO88890 Gm10252-201ENSMUST00000209541 832 ntBASIC11.48□□□□□ -0.57
Sh2d1aO88890 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sh2d1aO88890 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sh2d1aO88890 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sh2d1aO88890 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sh2d1aO88890 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Sh2d1aO88890 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sh2d1aO88890 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Sh2d1aO88890 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Sh2d1aO88890 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sh2d1aO88890 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Sh2d1aO88890 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sh2d1aO88890 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sh2d1aO88890 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sh2d1aO88890 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sh2d1aO88890 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sh2d1aO88890 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sh2d1aO88890 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Sh2d1aO88890 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Sh2d1aO88890 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sh2d1aO88890 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sh2d1aO88890 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sh2d1aO88890 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Sh2d1aO88890 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sh2d1aO88890 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Sh2d1aO88890 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sh2d1aO88890 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sh2d1aO88890 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sh2d1aO88890 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sh2d1aO88890 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sh2d1aO88890 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sh2d1aO88890 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Sh2d1aO88890 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sh2d1aO88890 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Sh2d1aO88890 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC11.47□□□□□ -0.57
Sh2d1aO88890 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sh2d1aO88890 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sh2d1aO88890 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Sh2d1aO88890 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sh2d1aO88890 Gm6190-201ENSMUST00000220683 1374 ntBASIC11.47□□□□□ -0.57
Sh2d1aO88890 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Sh2d1aO88890 Spsb2-203ENSMUST00000112473 1322 ntBASIC11.47□□□□□ -0.57
Sh2d1aO88890 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sh2d1aO88890 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Sh2d1aO88890 Gm13559-201ENSMUST00000120476 863 ntBASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms