Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
GFRA3O60609 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC18.52■□□□□ 0.56
GFRA3O60609 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
GFRA3O60609 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC18.52■□□□□ 0.56
GFRA3O60609 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC18.52■□□□□ 0.55
GFRA3O60609 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC18.51■□□□□ 0.55
GFRA3O60609 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
GFRA3O60609 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
GFRA3O60609 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
GFRA3O60609 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
GFRA3O60609 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
GFRA3O60609 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
GFRA3O60609 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC18.51■□□□□ 0.55
GFRA3O60609 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC18.51■□□□□ 0.55
GFRA3O60609 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.51■□□□□ 0.55
GFRA3O60609 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
GFRA3O60609 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC18.51■□□□□ 0.55
GFRA3O60609 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
GFRA3O60609 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC18.51■□□□□ 0.55
GFRA3O60609 PRR29-209ENST00000582540 967 ntTSL 2 BASIC18.51■□□□□ 0.55
GFRA3O60609 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC18.51■□□□□ 0.55
GFRA3O60609 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC18.51■□□□□ 0.55
GFRA3O60609 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC18.51■□□□□ 0.55
GFRA3O60609 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.51■□□□□ 0.55
GFRA3O60609 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
GFRA3O60609 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
GFRA3O60609 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
GFRA3O60609 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
GFRA3O60609 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
GFRA3O60609 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC18.51■□□□□ 0.55
GFRA3O60609 GOLGA2P6-201ENST00000340929 2049 ntBASIC18.5■□□□□ 0.55
GFRA3O60609 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
GFRA3O60609 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
GFRA3O60609 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC18.5■□□□□ 0.55
GFRA3O60609 ME2-208ENST00000638937 2471 ntTSL 5 BASIC18.5■□□□□ 0.55
GFRA3O60609 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
GFRA3O60609 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
GFRA3O60609 AC005229.4-201ENST00000610085 2198 ntBASIC18.5■□□□□ 0.55
GFRA3O60609 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
GFRA3O60609 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
GFRA3O60609 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
GFRA3O60609 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
GFRA3O60609 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
GFRA3O60609 PNKD-204ENST00000436005 978 ntTSL 5 BASIC18.5■□□□□ 0.55
GFRA3O60609 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC18.5■□□□□ 0.55
GFRA3O60609 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC18.5■□□□□ 0.55
GFRA3O60609 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
GFRA3O60609 RNA5SP416-201ENST00000516838 111 ntBASIC18.5■□□□□ 0.55
GFRA3O60609 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC18.5■□□□□ 0.55
GFRA3O60609 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.5■□□□□ 0.55
GFRA3O60609 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC18.5■□□□□ 0.55
GFRA3O60609 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
GFRA3O60609 GPAT2P1-201ENST00000444924 1672 ntBASIC18.5■□□□□ 0.55
GFRA3O60609 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.5■□□□□ 0.55
GFRA3O60609 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
GFRA3O60609 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
GFRA3O60609 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
GFRA3O60609 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
GFRA3O60609 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
GFRA3O60609 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.49■□□□□ 0.55
GFRA3O60609 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
GFRA3O60609 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC18.49■□□□□ 0.55
GFRA3O60609 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC18.49■□□□□ 0.55
GFRA3O60609 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
GFRA3O60609 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC18.49■□□□□ 0.55
GFRA3O60609 HS6ST1P1-201ENST00000481504 1234 ntBASIC18.49■□□□□ 0.55
GFRA3O60609 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC18.49■□□□□ 0.55
GFRA3O60609 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.49■□□□□ 0.55
GFRA3O60609 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.49■□□□□ 0.55
GFRA3O60609 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC18.49■□□□□ 0.55
GFRA3O60609 Z83851.2-201ENST00000609564 659 ntBASIC18.49■□□□□ 0.55
GFRA3O60609 AC106028.4-201ENST00000614509 607 ntBASIC18.49■□□□□ 0.55
GFRA3O60609 MIR1199-201ENST00000621445 119 ntBASIC18.49■□□□□ 0.55
GFRA3O60609 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
GFRA3O60609 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
GFRA3O60609 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
GFRA3O60609 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
GFRA3O60609 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
GFRA3O60609 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
GFRA3O60609 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
GFRA3O60609 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
GFRA3O60609 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
GFRA3O60609 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.48■□□□□ 0.55
GFRA3O60609 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC18.48■□□□□ 0.55
GFRA3O60609 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC18.48■□□□□ 0.55
GFRA3O60609 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.48■□□□□ 0.55
GFRA3O60609 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
GFRA3O60609 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
GFRA3O60609 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC18.48■□□□□ 0.55
GFRA3O60609 AC132008.2-207ENST00000454517 770 ntBASIC18.48■□□□□ 0.55
GFRA3O60609 AC091607.1-201ENST00000490318 1060 ntBASIC18.48■□□□□ 0.55
GFRA3O60609 SPCS2P1-201ENST00000561636 679 ntBASIC18.48■□□□□ 0.55
GFRA3O60609 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC18.48■□□□□ 0.55
GFRA3O60609 MTDHP5-201ENST00000598980 586 ntBASIC18.48■□□□□ 0.55
GFRA3O60609 GPR32P1-201ENST00000601788 811 ntBASIC18.48■□□□□ 0.55
GFRA3O60609 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
GFRA3O60609 AC121338.2-201ENST00000622535 1744 ntBASIC18.48■□□□□ 0.55
GFRA3O60609 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
GFRA3O60609 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
GFRA3O60609 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms