Protein–RNA interactions for Protein: A0A075B649

Trav13-2, T cell receptor alpha variable 13-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-2A0A075B649 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav13-2A0A075B649 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav13-2A0A075B649 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav13-2A0A075B649 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Trav13-2A0A075B649 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav13-2A0A075B649 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav13-2A0A075B649 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav13-2A0A075B649 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav13-2A0A075B649 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav13-2A0A075B649 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav13-2A0A075B649 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC10.94□□□□□ -0.66
Trav13-2A0A075B649 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav13-2A0A075B649 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Trav13-2A0A075B649 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav13-2A0A075B649 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav13-2A0A075B649 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav13-2A0A075B649 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC10.93□□□□□ -0.66
Trav13-2A0A075B649 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav13-2A0A075B649 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav13-2A0A075B649 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Trav13-2A0A075B649 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav13-2A0A075B649 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav13-2A0A075B649 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trav13-2A0A075B649 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav13-2A0A075B649 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trav13-2A0A075B649 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC10.93□□□□□ -0.66
Trav13-2A0A075B649 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav13-2A0A075B649 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav13-2A0A075B649 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Trav13-2A0A075B649 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC10.93□□□□□ -0.66
Trav13-2A0A075B649 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav13-2A0A075B649 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav13-2A0A075B649 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Trav13-2A0A075B649 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC10.93□□□□□ -0.66
Trav13-2A0A075B649 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC10.93□□□□□ -0.66
Trav13-2A0A075B649 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trav13-2A0A075B649 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav13-2A0A075B649 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trav13-2A0A075B649 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trav13-2A0A075B649 Gm37179-201ENSMUST00000194862 823 ntBASIC10.93□□□□□ -0.66
Trav13-2A0A075B649 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav13-2A0A075B649 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav13-2A0A075B649 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trav13-2A0A075B649 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav13-2A0A075B649 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Trav13-2A0A075B649 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC10.93□□□□□ -0.66
Trav13-2A0A075B649 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav13-2A0A075B649 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC10.93□□□□□ -0.66
Trav13-2A0A075B649 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav13-2A0A075B649 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav13-2A0A075B649 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Trav13-2A0A075B649 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC10.93□□□□□ -0.66
Trav13-2A0A075B649 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav13-2A0A075B649 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trav13-2A0A075B649 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Trav13-2A0A075B649 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav13-2A0A075B649 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC10.92□□□□□ -0.66
Trav13-2A0A075B649 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav13-2A0A075B649 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC10.92□□□□□ -0.66
Trav13-2A0A075B649 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav13-2A0A075B649 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav13-2A0A075B649 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav13-2A0A075B649 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav13-2A0A075B649 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav13-2A0A075B649 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav13-2A0A075B649 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Trav13-2A0A075B649 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav13-2A0A075B649 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav13-2A0A075B649 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Trav13-2A0A075B649 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Trav13-2A0A075B649 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav13-2A0A075B649 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav13-2A0A075B649 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC10.92□□□□□ -0.66
Trav13-2A0A075B649 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Trav13-2A0A075B649 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav13-2A0A075B649 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav13-2A0A075B649 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav13-2A0A075B649 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav13-2A0A075B649 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC10.92□□□□□ -0.66
Trav13-2A0A075B649 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC10.92□□□□□ -0.66
Trav13-2A0A075B649 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav13-2A0A075B649 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC10.92□□□□□ -0.66
Trav13-2A0A075B649 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trav13-2A0A075B649 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav13-2A0A075B649 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav13-2A0A075B649 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trav13-2A0A075B649 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Trav13-2A0A075B649 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC10.92□□□□□ -0.66
Trav13-2A0A075B649 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav13-2A0A075B649 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC10.91□□□□□ -0.66
Trav13-2A0A075B649 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav13-2A0A075B649 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav13-2A0A075B649 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav13-2A0A075B649 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Trav13-2A0A075B649 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav13-2A0A075B649 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav13-2A0A075B649 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav13-2A0A075B649 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav13-2A0A075B649 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav13-2A0A075B649 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms